RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 PRIMA1Q86XR5 153 aa8.87□□□□□ -0.99
ZNF548-201ENST00000336128 PCP2Q8IVA1 136 aa8.87□□□□□ -0.99
ZNF548-201ENST00000336128 OPRPNQ99935 248 aaPredicted RBP8.87□□□□□ -0.99
ZNF548-201ENST00000336128 CHCHD7Q9BUK0 85 aa8.87□□□□□ -0.99
ZNF548-201ENST00000336128 NIPBLQ6KC79 2804 aaeCLIP8.86□□□□□ -0.99
ZNF548-201ENST00000336128 SMIM9A6NGZ8 99 aa8.86□□□□□ -0.99
ZNF548-201ENST00000336128 CIDEAO60543 219 aa8.86□□□□□ -0.99
ZNF548-201ENST00000336128 HINT1P49773 126 aaPredicted RBP8.86□□□□□ -0.99
ZNF548-201ENST00000336128 RPL36AP83881 106 aaKnown RBP8.86□□□□□ -0.99
ZNF548-201ENST00000336128 COTL1Q14019 142 aa8.86□□□□□ -0.99
ZNF548-201ENST00000336128 SLC25A29Q8N8R3 303 aa8.86□□□□□ -0.99
ZNF548-201ENST00000336128 RPL36ALQ969Q0 106 aaKnown RBP8.86□□□□□ -0.99
ZNF548-201ENST00000336128 IGLV4-69A0A075B6H9 119 aa8.86□□□□□ -0.99
ZNF548-201ENST00000336128 TRBV7-3A0A075B6L6 115 aa8.86□□□□□ -0.99
ZNF548-201ENST00000336128 DLEU1O43261 78 aa8.86□□□□□ -0.99
ZNF548-201ENST00000336128 TENM1Q9UKZ4 2725 aa8.85□□□□□ -0.99
ZNF548-201ENST00000336128 IGLV4-3A0A075B6K6 122 aa8.85□□□□□ -0.99
ZNF548-201ENST00000336128 DEFB135Q30KP9 77 aa8.85□□□□□ -0.99
ZNF548-201ENST00000336128 SHISA2Q6UWI4 295 aa8.85□□□□□ -0.99
ZNF548-201ENST00000336128 ZMAT5Q9UDW3 170 aaKnown RBP8.85□□□□□ -0.99
ZNF548-201ENST00000336128 TEP1Q99973 2627 aaKnown RBP8.84□□□□□ -0.99
ZNF548-201ENST00000336128 TRGV4A0A0C4DH28 118 aa8.84□□□□□ -0.99
ZNF548-201ENST00000336128 A0A1B0GV90 55 aa8.84□□□□□ -0.99
ZNF548-201ENST00000336128 GAGE12JA6NER3 117 aa8.84□□□□□ -0.99
ZNF548-201ENST00000336128 GAGE1Q13065 139 aa8.84□□□□□ -0.99
ZNF548-201ENST00000336128 GAGE4Q13068 117 aa8.84□□□□□ -0.99
ZNF548-201ENST00000336128 GAGE5Q13069 117 aa8.84□□□□□ -0.99
ZNF548-201ENST00000336128 GAGE13Q4V321 117 aa8.84□□□□□ -0.99
ZNF548-201ENST00000336128 C12orf54Q6X4T0 127 aa8.84□□□□□ -0.99
ZNF548-201ENST00000336128 LINC00612Q8N6U2 182 aa8.84□□□□□ -0.99
ZNF548-201ENST00000336128 PYGO1Q9Y3Y4 419 aa8.84□□□□□ -0.99
ZNF548-201ENST00000336128 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.84□□□□□ -0.99
ZNF548-201ENST00000336128 IGKV2-29A2NJV5 120 aaPredicted RBP8.84□□□□□ -0.99
ZNF548-201ENST00000336128 C11orf86A6NJI1 115 aa8.84□□□□□ -0.99
ZNF548-201ENST00000336128 UBE2D3P61077 147 aa8.84□□□□□ -0.99
ZNF548-201ENST00000336128 UBE2D2P62837 147 aa8.84□□□□□ -0.99
ZNF548-201ENST00000336128 PAPPA-AS1Q5QFB9 102 aa8.84□□□□□ -0.99
ZNF548-201ENST00000336128 IGHV4-30-4P0DP06 118 aa8.83□□□□□ -1
ZNF548-201ENST00000336128 OXLD1Q5BKU9 147 aa8.83□□□□□ -1
ZNF548-201ENST00000336128 TTTY13Q9BZ97 58 aa8.83□□□□□ -1
ZNF548-201ENST00000336128 ATRQ13535 2644 aa8.83□□□□□ -1
ZNF548-201ENST00000336128 TRBV6-4A0A1B0GX49 114 aa8.83□□□□□ -1
ZNF548-201ENST00000336128 DEFB130BP0DP73 79 aa8.83□□□□□ -1
ZNF548-201ENST00000336128 DEFB130AP0DP74 79 aa8.83□□□□□ -1
ZNF548-201ENST00000336128 FHL2Q14192 279 aa8.83□□□□□ -1
ZNF548-201ENST00000336128 MPV17L2Q567V2 206 aa8.83□□□□□ -1
ZNF548-201ENST00000336128 TMEM97Q5BJF2 176 aa8.83□□□□□ -1
ZNF548-201ENST00000336128 CEMP1Q6PRD7 247 aaPredicted RBP8.83□□□□□ -1
ZNF548-201ENST00000336128 FAM104AQ969W3 186 aa8.83□□□□□ -1
ZNF548-201ENST00000336128 SPANXA1Q9NS26 97 aa8.83□□□□□ -1
ZNF548-201ENST00000336128 UBE2D4Q9Y2X8 147 aa8.83□□□□□ -1
ZNF548-201ENST00000336128 LOC100131303A0A0U1RQF7 123 aa8.82□□□□□ -1
ZNF548-201ENST00000336128 SIVA1O15304 175 aa8.82□□□□□ -1
ZNF548-201ENST00000336128 COL5A1-AS1Q5SY13 56 aa8.82□□□□□ -1
ZNF548-201ENST00000336128 DAZ4Q86SG3 579 aaKnown RBP8.82□□□□□ -1
ZNF548-201ENST00000336128 VCX2Q9H322 139 aa8.82□□□□□ -1
ZNF548-201ENST00000336128 DAZ3Q9NR90 486 aaKnown RBP8.82□□□□□ -1
ZNF548-201ENST00000336128 NPSP0C0P6 89 aa8.81□□□□□ -1
ZNF548-201ENST00000336128 OR11H2Q8NH07 326 aa8.81□□□□□ -1
ZNF548-201ENST00000336128 BAHCC1Q9P281 2608 aa8.81□□□□□ -1
ZNF548-201ENST00000336128 E9PLD3 99 aa8.81□□□□□ -1
ZNF548-201ENST00000336128 KRTAP10-11P60412 298 aa8.81□□□□□ -1
ZNF548-201ENST00000336128 NFE4Q86UQ8 179 aa8.81□□□□□ -1
ZNF548-201ENST00000336128 MAPKAPK5-AS1Q8N8E1 139 aa8.81□□□□□ -1
ZNF548-201ENST00000336128 AMELXQ99217 191 aa8.81□□□□□ -1
ZNF548-201ENST00000336128 VWFP04275 2813 aa8.81□□□□□ -1
ZNF548-201ENST00000336128 TRAV8-6A0A0B4J262 113 aa8.8□□□□□ -1
ZNF548-201ENST00000336128 CRYBA4P53673 196 aa8.8□□□□□ -1
ZNF548-201ENST00000336128 BVES-AS1Q5T3Y7 98 aa8.8□□□□□ -1
ZNF548-201ENST00000336128 FAM222AQ5U5X8 452 aa8.8□□□□□ -1
ZNF548-201ENST00000336128 PRADC1Q9BSG0 188 aa8.8□□□□□ -1
ZNF548-201ENST00000336128 CHAC1Q9BUX1 264 aa8.8□□□□□ -1
ZNF548-201ENST00000336128 NOTCH3Q9UM47 2321 aa8.8□□□□□ -1
ZNF548-201ENST00000336128 IGHV4-28A0A0C4DH34 117 aa8.8□□□□□ -1
ZNF548-201ENST00000336128 HERVK_113P61574 105 aa8.8□□□□□ -1
ZNF548-201ENST00000336128 NTM-AS1Q6ZSK4 140 aa8.8□□□□□ -1
ZNF548-201ENST00000336128 LYRM9A8MSI8 78 aa8.79□□□□□ -1
ZNF548-201ENST00000336128 DEFB4AO15263 64 aa8.79□□□□□ -1
ZNF548-201ENST00000336128 RNASE13Q5GAN3 156 aaKnown RBP8.79□□□□□ -1
ZNF548-201ENST00000336128 TMEM170BQ5T4T1 132 aa8.79□□□□□ -1
ZNF548-201ENST00000336128 Q6ZUT4 128 aa8.79□□□□□ -1
ZNF548-201ENST00000336128 TIMM21Q9BVV7 248 aa8.79□□□□□ -1
ZNF548-201ENST00000336128 A0A0J9YXV3 536 aa8.78□□□□□ -1
ZNF548-201ENST00000336128 LINC00694P0DN24 101 aa8.78□□□□□ -1
ZNF548-201ENST00000336128 EGFEM1PQ0D2K5 195 aa8.78□□□□□ -1
ZNF548-201ENST00000336128 SBSPONQ8IVN8 264 aa8.78□□□□□ -1
ZNF548-201ENST00000336128 RNF183Q96D59 192 aa8.78□□□□□ -1
ZNF548-201ENST00000336128 HIGD1BQ9P298 99 aa8.78□□□□□ -1
ZNF548-201ENST00000336128 MIFP14174 115 aa8.78□□□□□ -1
ZNF548-201ENST00000336128 HSD52Q0P140 79 aa8.78□□□□□ -1
ZNF548-201ENST00000336128 Q8NAQ8 132 aa8.78□□□□□ -1
ZNF548-201ENST00000336128 TRBV25-1A0A075B6N4 114 aa8.77□□□□□ -1.01
ZNF548-201ENST00000336128 ZNF22P17026 224 aaPredicted RBP8.77□□□□□ -1.01
ZNF548-201ENST00000336128 MRPS36P82909 103 aaKnown RBP8.77□□□□□ -1.01
ZNF548-201ENST00000336128 GTSF1LQ9H1H1 148 aa8.77□□□□□ -1.01
ZNF548-201ENST00000336128 MYMXA0A1B0GTQ4 84 aa8.77□□□□□ -1.01
ZNF548-201ENST00000336128 DGAT2L7PQ6IED9 249 aa8.76□□□□□ -1.01
ZNF548-201ENST00000336128 TMEM243Q9BU79 118 aa8.76□□□□□ -1.01
ZNF548-201ENST00000336128 TMEM223A0PJW6 202 aa8.75□□□□□ -1.01
ZNF548-201ENST00000336128 ZNF25P17030 456 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms