RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 UBE2D2P62837 147 aa17.02■□□□□ 0.32
NDEL1-201ENST00000334527 J3QR89 54 aa17.01■□□□□ 0.31
NDEL1-201ENST00000334527 C11orf72Q8NBR9 251 aa17.01■□□□□ 0.31
NDEL1-201ENST00000334527 RNASE13Q5GAN3 156 aaKnown RBP17■□□□□ 0.31
NDEL1-201ENST00000334527 PTH2Q96A98 100 aa17■□□□□ 0.31
NDEL1-201ENST00000334527 SPXQ9BT56 116 aa17■□□□□ 0.31
NDEL1-201ENST00000334527 MYO9AB2RTY4 2548 aa17■□□□□ 0.31
NDEL1-201ENST00000334527 INSP01308 110 aa17■□□□□ 0.31
NDEL1-201ENST00000334527 LYRM7Q5U5X0 104 aa16.99■□□□□ 0.31
NDEL1-201ENST00000334527 C10orf126Q8N4M7 172 aa16.99■□□□□ 0.31
NDEL1-201ENST00000334527 MRPS36P82909 103 aaKnown RBP16.99■□□□□ 0.31
NDEL1-201ENST00000334527 PRO1854Q9UHT4 67 aa16.99■□□□□ 0.31
NDEL1-201ENST00000334527 LINC00467Q9BRT7 94 aa16.98■□□□□ 0.31
NDEL1-201ENST00000334527 CHCHD7Q9BUK0 85 aa16.98■□□□□ 0.31
NDEL1-201ENST00000334527 CRYBA4P53673 196 aa16.97■□□□□ 0.31
NDEL1-201ENST00000334527 KRTAP1-3Q8IUG1 177 aa16.97■□□□□ 0.31
NDEL1-201ENST00000334527 TIMM21Q9BVV7 248 aa16.97■□□□□ 0.31
NDEL1-201ENST00000334527 TSSC4Q9Y5U2 329 aaPredicted RBP16.97■□□□□ 0.31
NDEL1-201ENST00000334527 A4D1N5 150 aa16.97■□□□□ 0.31
NDEL1-201ENST00000334527 IGHV3-30-3P0DP02 117 aa16.97■□□□□ 0.31
NDEL1-201ENST00000334527 SMCPP49901 116 aaPredicted RBP16.96■□□□□ 0.31
NDEL1-201ENST00000334527 Q6ZSV7 163 aa16.96■□□□□ 0.31
NDEL1-201ENST00000334527 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.95■□□□□ 0.3
NDEL1-201ENST00000334527 IGKV2-29A2NJV5 120 aaPredicted RBP16.95■□□□□ 0.3
NDEL1-201ENST00000334527 IGHV3-53P01767 116 aa16.95■□□□□ 0.3
NDEL1-201ENST00000334527 INSL3P51460 131 aa16.95■□□□□ 0.3
NDEL1-201ENST00000334527 UBE2D4Q9Y2X8 147 aa16.95■□□□□ 0.3
NDEL1-201ENST00000334527 IGHV3-38A0A0C4DH36 116 aa16.95■□□□□ 0.3
NDEL1-201ENST00000334527 TMEM238C9JI98 176 aa16.95■□□□□ 0.3
NDEL1-201ENST00000334527 BEAN1Q3B7T3 259 aa16.95■□□□□ 0.3
NDEL1-201ENST00000334527 MUSTN1Q8IVN3 82 aa16.95■□□□□ 0.3
NDEL1-201ENST00000334527 ZNF418Q8TF45 676 aaPredicted RBP16.95■□□□□ 0.3
NDEL1-201ENST00000334527 SPANXA1Q9NS26 97 aa16.95■□□□□ 0.3
NDEL1-201ENST00000334527 XCL2Q9UBD3 114 aa16.95■□□□□ 0.3
NDEL1-201ENST00000334527 A0A0J9YXY3 114 aa16.94■□□□□ 0.3
NDEL1-201ENST00000334527 TRAV8-3A0A0A6YYJ7 113 aa16.94■□□□□ 0.3
NDEL1-201ENST00000334527 ADARB2-AS1A8MUL3 147 aa16.94■□□□□ 0.3
NDEL1-201ENST00000334527 TCL1BO95988 128 aa16.94■□□□□ 0.3
NDEL1-201ENST00000334527 ODF3L2Q3SX64 289 aa16.93■□□□□ 0.3
NDEL1-201ENST00000334527 TMEM86BQ8N661 226 aa16.93■□□□□ 0.3
NDEL1-201ENST00000334527 RS1O15537 224 aa16.93■□□□□ 0.3
NDEL1-201ENST00000334527 C11orf44Q8N8P7 122 aa16.93■□□□□ 0.3
NDEL1-201ENST00000334527 DNAJC30Q96LL9 226 aa16.93■□□□□ 0.3
NDEL1-201ENST00000334527 ZNF469Q96JG9 3925 aaPredicted RBP16.92■□□□□ 0.3
NDEL1-201ENST00000334527 GAGE12HA6NDE8 117 aa16.92■□□□□ 0.3
NDEL1-201ENST00000334527 EIF4EBP3O60516 100 aaPredicted RBP16.92■□□□□ 0.3
NDEL1-201ENST00000334527 AZU1P20160 251 aa16.92■□□□□ 0.3
NDEL1-201ENST00000334527 TRBV20-1A0A075B6N2 111 aa16.92■□□□□ 0.3
NDEL1-201ENST00000334527 A0A1W2PRX2 142 aa16.92■□□□□ 0.3
NDEL1-201ENST00000334527 C1QTNF4Q9BXJ3 329 aa16.92■□□□□ 0.3
NDEL1-201ENST00000334527 AKAP9Q99996 3911 aa16.91■□□□□ 0.3
NDEL1-201ENST00000334527 TINCRA0A1B0GVN0 87 aa16.91■□□□□ 0.3
NDEL1-201ENST00000334527 SCGB1C2P0DMR2 95 aa16.91■□□□□ 0.3
NDEL1-201ENST00000334527 Q6ZUT4 128 aa16.91■□□□□ 0.3
NDEL1-201ENST00000334527 APCP25054 2843 aa16.91■□□□□ 0.3
NDEL1-201ENST00000334527 IGHV1-58A0A0C4DH39 117 aa16.91■□□□□ 0.3
NDEL1-201ENST00000334527 DNAJC9-AS1A6NH13 148 aa16.91■□□□□ 0.3
NDEL1-201ENST00000334527 STHQ8IWL8 128 aa16.91■□□□□ 0.3
NDEL1-201ENST00000334527 TMEM263Q8WUH6 116 aaKnown RBP16.91■□□□□ 0.3
NDEL1-201ENST00000334527 CHD6Q8TD26 2715 aa16.9■□□□□ 0.3
NDEL1-201ENST00000334527 IGHV3OR16-12A0A075B7B8 117 aa16.9■□□□□ 0.3
NDEL1-201ENST00000334527 GTSF1LQ9H1H1 148 aa16.9■□□□□ 0.3
NDEL1-201ENST00000334527 CLUHP3Q96NS8 147 aa16.89■□□□□ 0.3
NDEL1-201ENST00000334527 TLN2Q9Y4G6 2542 aa16.89■□□□□ 0.29
NDEL1-201ENST00000334527 A0A0B4J2C4 111 aa16.89■□□□□ 0.29
NDEL1-201ENST00000334527 IGHV3-33P01772 117 aa16.89■□□□□ 0.29
NDEL1-201ENST00000334527 ATP6V0E2Q8NHE4 81 aa16.89■□□□□ 0.29
NDEL1-201ENST00000334527 SIGMAR1Q99720 223 aa16.89■□□□□ 0.29
NDEL1-201ENST00000334527 FOXI1Q12951 378 aa16.88■□□□□ 0.29
NDEL1-201ENST00000334527 SPATA25Q9BR10 227 aa16.88■□□□□ 0.29
NDEL1-201ENST00000334527 TRAV25A0A0B4J276 109 aa16.87■□□□□ 0.29
NDEL1-201ENST00000334527 H7C2G1 150 aa16.87■□□□□ 0.29
NDEL1-201ENST00000334527 SPINK8P0C7L1 97 aa16.87■□□□□ 0.29
NDEL1-201ENST00000334527 VSIG2Q96IQ7 327 aa16.87■□□□□ 0.29
NDEL1-201ENST00000334527 LITAFQ99732 161 aa16.87■□□□□ 0.29
NDEL1-201ENST00000334527 EPG5Q9HCE0 2579 aa16.87■□□□□ 0.29
NDEL1-201ENST00000334527 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.87■□□□□ 0.29
NDEL1-201ENST00000334527 C1orf158Q8N1D5 194 aa16.87■□□□□ 0.29
NDEL1-201ENST00000334527 NDUFA12Q9UI09 145 aa16.87■□□□□ 0.29
NDEL1-201ENST00000334527 ERG28Q9UKR5 140 aa16.87■□□□□ 0.29
NDEL1-201ENST00000334527 WFDC11Q8NEX6 87 aa16.86■□□□□ 0.29
NDEL1-201ENST00000334527 A8MZ25 164 aa16.86■□□□□ 0.29
NDEL1-201ENST00000334527 ITPR3Q14573 2671 aa16.85■□□□□ 0.29
NDEL1-201ENST00000334527 CCL24O00175 119 aa16.85■□□□□ 0.29
NDEL1-201ENST00000334527 FHL3Q13643 280 aa16.85■□□□□ 0.29
NDEL1-201ENST00000334527 GEMIN7Q9H840 131 aaKnown RBP16.85■□□□□ 0.29
NDEL1-201ENST00000334527 TRGV1A0A0A0MS02 117 aa16.85■□□□□ 0.29
NDEL1-201ENST00000334527 PRSS2P07478 247 aa16.84■□□□□ 0.29
NDEL1-201ENST00000334527 ESM1Q9NQ30 184 aa16.84■□□□□ 0.29
NDEL1-201ENST00000334527 TEX29Q8N6K0 151 aa16.83■□□□□ 0.28
NDEL1-201ENST00000334527 SONP18583 2426 aaKnown RBP16.83■□□□□ 0.28
NDEL1-201ENST00000334527 ADAMTSL4-AS1Q5T5F5 129 aa16.82■□□□□ 0.28
NDEL1-201ENST00000334527 IL17DQ8TAD2 202 aa16.82■□□□□ 0.28
NDEL1-201ENST00000334527 SMAGPQ0VAQ4 97 aa16.82■□□□□ 0.28
NDEL1-201ENST00000334527 Q1RN00 199 aa16.82■□□□□ 0.28
NDEL1-201ENST00000334527 DGAT2L7PQ6IED9 249 aa16.81■□□□□ 0.28
NDEL1-201ENST00000334527 SBSPONQ8IVN8 264 aa16.81■□□□□ 0.28
NDEL1-201ENST00000334527 TEN1Q86WV5 123 aa16.81■□□□□ 0.28
NDEL1-201ENST00000334527 SPANXDQ9BXN6 97 aa16.81■□□□□ 0.28
NDEL1-201ENST00000334527 SPANXCQ9NY87 97 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms