RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 OXLD1Q5BKU9 147 aa8.33□□□□□ -1.08
POLR1B-202ENST00000333990 C2orf82Q6UX34 121 aa8.33□□□□□ -1.08
POLR1B-202ENST00000333990 H7C423 109 aa8.32□□□□□ -1.08
POLR1B-202ENST00000333990 TTC32Q5I0X7 151 aa8.32□□□□□ -1.08
POLR1B-202ENST00000333990 Q6ZVH6 145 aa8.32□□□□□ -1.08
POLR1B-202ENST00000333990 PRO1854Q9UHT4 67 aa8.32□□□□□ -1.08
POLR1B-202ENST00000333990 PIK3CD-AS1Q5SR53 167 aa8.31□□□□□ -1.08
POLR1B-202ENST00000333990 C15orf53Q8NAA6 179 aa8.31□□□□□ -1.08
POLR1B-202ENST00000333990 COX7B2Q8TF08 81 aa8.31□□□□□ -1.08
POLR1B-202ENST00000333990 SNHG12Q9BXW3 62 aa8.31□□□□□ -1.08
POLR1B-202ENST00000333990 PCSK5Q92824 1860 aa8.31□□□□□ -1.08
POLR1B-202ENST00000333990 RS1O15537 224 aa8.31□□□□□ -1.08
POLR1B-202ENST00000333990 PROK1P58294 105 aa8.31□□□□□ -1.08
POLR1B-202ENST00000333990 FAM110AQ9BQ89 295 aa8.31□□□□□ -1.08
POLR1B-202ENST00000333990 IGHV4-28A0A0C4DH34 117 aa8.31□□□□□ -1.08
POLR1B-202ENST00000333990 SPAG11BQ08648 103 aa8.31□□□□□ -1.08
POLR1B-202ENST00000333990 ODF3L2Q3SX64 289 aa8.31□□□□□ -1.08
POLR1B-202ENST00000333990 IGLV2-11P01706 119 aa8.31□□□□□ -1.08
POLR1B-202ENST00000333990 SCRT2Q9NQ03 307 aa8.31□□□□□ -1.08
POLR1B-202ENST00000333990 TRAV8-3A0A0A6YYJ7 113 aa8.3□□□□□ -1.08
POLR1B-202ENST00000333990 IGHV4-30-4P0DP06 118 aa8.3□□□□□ -1.08
POLR1B-202ENST00000333990 CRIP1P50238 77 aa8.3□□□□□ -1.08
POLR1B-202ENST00000333990 CFAP126Q5VTH2 177 aa8.3□□□□□ -1.08
POLR1B-202ENST00000333990 HIST2H2BDQ6DRA6 164 aa8.3□□□□□ -1.08
POLR1B-202ENST00000333990 BAALCQ8WXS3 180 aa8.3□□□□□ -1.08
POLR1B-202ENST00000333990 TMEM126AQ9H061 195 aa8.3□□□□□ -1.08
POLR1B-202ENST00000333990 CDK2AP2O75956 126 aa8.3□□□□□ -1.08
POLR1B-202ENST00000333990 NAA38Q9BRA0 125 aaKnown RBP8.3□□□□□ -1.08
POLR1B-202ENST00000333990 CRYBA4P53673 196 aa8.29□□□□□ -1.08
POLR1B-202ENST00000333990 Q8N2B8 174 aa8.29□□□□□ -1.08
POLR1B-202ENST00000333990 RNF183Q96D59 192 aa8.29□□□□□ -1.08
POLR1B-202ENST00000333990 WFDC10AQ9H1F0 79 aa8.29□□□□□ -1.08
POLR1B-202ENST00000333990 RPL18AQ02543 176 aaKnown RBP8.29□□□□□ -1.08
POLR1B-202ENST00000333990 C11orf86A6NJI1 115 aa8.28□□□□□ -1.08
POLR1B-202ENST00000333990 CEND1Q8N111 149 aa8.28□□□□□ -1.08
POLR1B-202ENST00000333990 CHD7Q9P2D1 2997 aa8.28□□□□□ -1.08
POLR1B-202ENST00000333990 MRPS12O15235 138 aaKnown RBP8.28□□□□□ -1.08
POLR1B-202ENST00000333990 MRGPRG-AS1Q2M3A8 158 aa8.28□□□□□ -1.08
POLR1B-202ENST00000333990 M0QY20 66 aa8.27□□□□□ -1.08
POLR1B-202ENST00000333990 NEXN-AS1Q8NBZ9 246 aa8.27□□□□□ -1.08
POLR1B-202ENST00000333990 TRAV8-4A0A0B4J246 113 aa8.27□□□□□ -1.09
POLR1B-202ENST00000333990 TRBV6-5A0A0K0K1A5 114 aa8.27□□□□□ -1.09
POLR1B-202ENST00000333990 FRMD6-AS1P0C7T7 363 aa8.27□□□□□ -1.09
POLR1B-202ENST00000333990 INAFM2P0DMQ5 153 aa8.27□□□□□ -1.09
POLR1B-202ENST00000333990 C9JAW5 83 aa8.27□□□□□ -1.09
POLR1B-202ENST00000333990 P0DMU3 169 aa8.27□□□□□ -1.09
POLR1B-202ENST00000333990 FAM231AP0DMU4 169 aa8.27□□□□□ -1.09
POLR1B-202ENST00000333990 FAM231CP0DMU5 169 aa8.27□□□□□ -1.09
POLR1B-202ENST00000333990 RNASE3P12724 160 aaKnown RBP8.27□□□□□ -1.09
POLR1B-202ENST00000333990 TRBV6-8A0A0A6YYG3 113 aa8.26□□□□□ -1.09
POLR1B-202ENST00000333990 E9PLD3 99 aa8.26□□□□□ -1.09
POLR1B-202ENST00000333990 TIRAPP58753 221 aa8.26□□□□□ -1.09
POLR1B-202ENST00000333990 REG3AQ06141 175 aa8.26□□□□□ -1.09
POLR1B-202ENST00000333990 BVES-AS1Q5T3Y7 98 aa8.26□□□□□ -1.09
POLR1B-202ENST00000333990 C9orf85Q96MD7 179 aa8.26□□□□□ -1.09
POLR1B-202ENST00000333990 Q6ZUT4 128 aa8.26□□□□□ -1.09
POLR1B-202ENST00000333990 LINC00173Q6ZV60 143 aa8.26□□□□□ -1.09
POLR1B-202ENST00000333990 ETDCA0A1B0GVM5 59 aa8.26□□□□□ -1.09
POLR1B-202ENST00000333990 NUPR1O60356 82 aa8.26□□□□□ -1.09
POLR1B-202ENST00000333990 SND1-IT1Q9HBX3 110 aa8.26□□□□□ -1.09
POLR1B-202ENST00000333990 IGHV1-58A0A0C4DH39 117 aa8.25□□□□□ -1.09
POLR1B-202ENST00000333990 RPL32P62910 135 aaKnown RBP8.25□□□□□ -1.09
POLR1B-202ENST00000333990 GAGE2EQ4V326 116 aa8.25□□□□□ -1.09
POLR1B-202ENST00000333990 GAGE2DQ9UEU5 116 aa8.25□□□□□ -1.09
POLR1B-202ENST00000333990 IGHV4-4A0A075B6R2 117 aa8.25□□□□□ -1.09
POLR1B-202ENST00000333990 CRYGDP07320 174 aa8.25□□□□□ -1.09
POLR1B-202ENST00000333990 ODF1Q14990 250 aa8.25□□□□□ -1.09
POLR1B-202ENST00000333990 SPATA12Q7Z6I5 190 aa8.25□□□□□ -1.09
POLR1B-202ENST00000333990 HECTD1Q9ULT8 2610 aa8.25□□□□□ -1.09
POLR1B-202ENST00000333990 GAGE12HA6NDE8 117 aa8.25□□□□□ -1.09
POLR1B-202ENST00000333990 PCP2Q8IVA1 136 aa8.25□□□□□ -1.09
POLR1B-202ENST00000333990 PRRC2CQ9Y520 2896 aaKnown RBP8.25□□□□□ -1.09
POLR1B-202ENST00000333990 TRBV27A0A0K0K1C4 114 aa8.24□□□□□ -1.09
POLR1B-202ENST00000333990 PRR9Q5T870 116 aa8.24□□□□□ -1.09
POLR1B-202ENST00000333990 LINC00269Q8N2A0 174 aa8.24□□□□□ -1.09
POLR1B-202ENST00000333990 ANKRD39Q53RE8 183 aa8.24□□□□□ -1.09
POLR1B-202ENST00000333990 KPRPQ5T749 579 aaPredicted RBP8.24□□□□□ -1.09
POLR1B-202ENST00000333990 TINCRA0A1B0GVN0 87 aa8.24□□□□□ -1.09
POLR1B-202ENST00000333990 MTURNQ8N3F0 131 aa8.24□□□□□ -1.09
POLR1B-202ENST00000333990 C9orf118A6NHY6 69 aa8.23□□□□□ -1.09
POLR1B-202ENST00000333990 SOCS3O14543 225 aa8.23□□□□□ -1.09
POLR1B-202ENST00000333990 CFC1BP0CG36 223 aa8.23□□□□□ -1.09
POLR1B-202ENST00000333990 CFC1P0CG37 223 aa8.23□□□□□ -1.09
POLR1B-202ENST00000333990 GAGE2BQ13066 116 aa8.23□□□□□ -1.09
POLR1B-202ENST00000333990 C11orf21Q9P2W6 132 aa8.23□□□□□ -1.09
POLR1B-202ENST00000333990 LINC00467Q9BRT7 94 aa8.22□□□□□ -1.09
POLR1B-202ENST00000333990 CNFNQ9BYD5 112 aa8.22□□□□□ -1.09
POLR1B-202ENST00000333990 DSCAML1Q8TD84 2053 aa8.22□□□□□ -1.09
POLR1B-202ENST00000333990 H0YGX0 51 aa8.22□□□□□ -1.09
POLR1B-202ENST00000333990 LELP1Q5T871 98 aa8.22□□□□□ -1.09
POLR1B-202ENST00000333990 NFE4Q86UQ8 179 aa8.22□□□□□ -1.09
POLR1B-202ENST00000333990 UBE2V1Q13404 147 aa8.22□□□□□ -1.09
POLR1B-202ENST00000333990 CEMP1Q6PRD7 247 aaPredicted RBP8.22□□□□□ -1.09
POLR1B-202ENST00000333990 HIGD1BQ9P298 99 aa8.22□□□□□ -1.09
POLR1B-202ENST00000333990 MIAQ16674 131 aa8.21□□□□□ -1.09
POLR1B-202ENST00000333990 C12orf74Q32Q52 190 aa8.21□□□□□ -1.09
POLR1B-202ENST00000333990 CHCHD10Q8WYQ3 142 aaPredicted RBP8.21□□□□□ -1.09
POLR1B-202ENST00000333990 PYGO1Q9Y3Y4 419 aa8.21□□□□□ -1.09
POLR1B-202ENST00000333990 CHD9Q3L8U1 2897 aa8.21□□□□□ -1.1
POLR1B-202ENST00000333990 DLEU1O43261 78 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms