RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 ZNF493Q6ZR52 646 aa11.67□□□□□ -0.54
PDGFB-201ENST00000331163 A0A0J9YY99 117 aa11.67□□□□□ -0.54
PDGFB-201ENST00000331163 RBMY1BA6NDE4 496 aaKnown RBP11.67□□□□□ -0.54
PDGFB-201ENST00000331163 RBMY1EA6NEQ0 496 aaKnown RBP11.67□□□□□ -0.54
PDGFB-201ENST00000331163 F8W1H4 67 aa11.67□□□□□ -0.54
PDGFB-201ENST00000331163 RBMY1DP0C7P1 496 aaKnown RBP11.67□□□□□ -0.54
PDGFB-201ENST00000331163 TRGV11A0A075B6L2 103 aa11.66□□□□□ -0.54
PDGFB-201ENST00000331163 SCGB1C2P0DMR2 95 aa11.66□□□□□ -0.54
PDGFB-201ENST00000331163 DGAT2L7PQ6IED9 249 aa11.66□□□□□ -0.54
PDGFB-201ENST00000331163 NXT2Q9NPJ8 142 aaKnown RBP11.66□□□□□ -0.54
PDGFB-201ENST00000331163 LINC01549A6NIU2 74 aa11.65□□□□□ -0.54
PDGFB-201ENST00000331163 ZNF415Q09FC8 603 aa11.65□□□□□ -0.54
PDGFB-201ENST00000331163 RNF152Q8N8N0 203 aa11.65□□□□□ -0.54
PDGFB-201ENST00000331163 TNFRSF18Q9Y5U5 241 aa11.65□□□□□ -0.54
PDGFB-201ENST00000331163 E9PLD3 99 aa11.65□□□□□ -0.54
PDGFB-201ENST00000331163 IGLV1-51P01701 117 aa11.65□□□□□ -0.54
PDGFB-201ENST00000331163 Q6ZTI0 123 aa11.65□□□□□ -0.54
PDGFB-201ENST00000331163 RETNQ9HD89 108 aa11.65□□□□□ -0.54
PDGFB-201ENST00000331163 RNF185Q96GF1 192 aa11.64□□□□□ -0.55
PDGFB-201ENST00000331163 GAGE12JA6NER3 117 aa11.64□□□□□ -0.55
PDGFB-201ENST00000331163 ADARB2-AS1A8MUL3 147 aa11.64□□□□□ -0.55
PDGFB-201ENST00000331163 GAGE4Q13068 117 aa11.64□□□□□ -0.55
PDGFB-201ENST00000331163 GAGE5Q13069 117 aa11.64□□□□□ -0.55
PDGFB-201ENST00000331163 LINC01559Q495D7 138 aa11.64□□□□□ -0.55
PDGFB-201ENST00000331163 RNASE13Q5GAN3 156 aaKnown RBP11.64□□□□□ -0.55
PDGFB-201ENST00000331163 DPH3P1Q9H4G8 78 aa11.64□□□□□ -0.55
PDGFB-201ENST00000331163 ATP5LO75964 103 aa11.63□□□□□ -0.55
PDGFB-201ENST00000331163 MT-ATP8P03928 68 aa11.63□□□□□ -0.55
PDGFB-201ENST00000331163 RBMY1A1P0DJD3 496 aaKnown RBP11.63□□□□□ -0.55
PDGFB-201ENST00000331163 RBMY1CP0DJD4 496 aa11.63□□□□□ -0.55
PDGFB-201ENST00000331163 RBMY1FQ15415 496 aaKnown RBP11.63□□□□□ -0.55
PDGFB-201ENST00000331163 SCGB3A1Q96QR1 104 aa11.63□□□□□ -0.55
PDGFB-201ENST00000331163 ZFP2Q6ZN57 461 aa11.63□□□□□ -0.55
PDGFB-201ENST00000331163 U3KQK5 164 aa11.63□□□□□ -0.55
PDGFB-201ENST00000331163 AKAP9Q99996 3911 aa11.62□□□□□ -0.55
PDGFB-201ENST00000331163 ZNF815PA8K554 130 aa11.62□□□□□ -0.55
PDGFB-201ENST00000331163 BRI3O95415 125 aa11.62□□□□□ -0.55
PDGFB-201ENST00000331163 LAGE3Q14657 143 aa11.62□□□□□ -0.55
PDGFB-201ENST00000331163 RNASE3P12724 160 aaKnown RBP11.61□□□□□ -0.55
PDGFB-201ENST00000331163 TMEM262E9PQX1 116 aa11.61□□□□□ -0.55
PDGFB-201ENST00000331163 FHL3Q13643 280 aa11.61□□□□□ -0.55
PDGFB-201ENST00000331163 C1QTNF4Q9BXJ3 329 aa11.61□□□□□ -0.55
PDGFB-201ENST00000331163 KIR2DL4Q99706 377 aa11.61□□□□□ -0.55
PDGFB-201ENST00000331163 TM2D2Q9BX73 214 aa11.6□□□□□ -0.55
PDGFB-201ENST00000331163 HIGD1BQ9P298 99 aa11.6□□□□□ -0.55
PDGFB-201ENST00000331163 SS18L2Q9UHA2 77 aa11.6□□□□□ -0.55
PDGFB-201ENST00000331163 LENEPQ9Y5L5 61 aa11.6□□□□□ -0.55
PDGFB-201ENST00000331163 F5H768 121 aa11.6□□□□□ -0.55
PDGFB-201ENST00000331163 SHISA2Q6UWI4 295 aa11.59□□□□□ -0.55
PDGFB-201ENST00000331163 ZNRF2Q8NHG8 242 aa11.59□□□□□ -0.55
PDGFB-201ENST00000331163 MRAP2Q96G30 205 aa11.59□□□□□ -0.55
PDGFB-201ENST00000331163 Q8N8P6 123 aa11.59□□□□□ -0.55
PDGFB-201ENST00000331163 TRAV25A0A0B4J276 109 aa11.58□□□□□ -0.56
PDGFB-201ENST00000331163 MDFIQ99750 246 aa11.58□□□□□ -0.56
PDGFB-201ENST00000331163 KLLNB2CW77 178 aa11.58□□□□□ -0.56
PDGFB-201ENST00000331163 IGHV4-30-4P0DP06 118 aa11.58□□□□□ -0.56
PDGFB-201ENST00000331163 SDHAF1A6NFY7 115 aa11.58□□□□□ -0.56
PDGFB-201ENST00000331163 IGLC6P0CF74 106 aa11.58□□□□□ -0.56
PDGFB-201ENST00000331163 FOXI1Q12951 378 aa11.58□□□□□ -0.56
PDGFB-201ENST00000331163 PRADC1Q9BSG0 188 aa11.58□□□□□ -0.56
PDGFB-201ENST00000331163 MYMXA0A1B0GTQ4 84 aa11.57□□□□□ -0.56
PDGFB-201ENST00000331163 IGHV3-64A0A075B6Q5 118 aa11.56□□□□□ -0.56
PDGFB-201ENST00000331163 A0A087WX48 190 aa11.56□□□□□ -0.56
PDGFB-201ENST00000331163 PLEKHB2Q96CS7 222 aa11.56□□□□□ -0.56
PDGFB-201ENST00000331163 RNF183Q96D59 192 aa11.56□□□□□ -0.56
PDGFB-201ENST00000331163 PRSS29PA6NIE9 313 aa11.56□□□□□ -0.56
PDGFB-201ENST00000331163 SCGB1A1P11684 91 aa11.56□□□□□ -0.56
PDGFB-201ENST00000331163 SUMO4Q6EEV6 95 aa11.56□□□□□ -0.56
PDGFB-201ENST00000331163 GATD1Q8NB37 220 aa11.56□□□□□ -0.56
PDGFB-201ENST00000331163 CITED1Q99966 193 aa11.56□□□□□ -0.56
PDGFB-201ENST00000331163 SPATA25Q9BR10 227 aa11.56□□□□□ -0.56
PDGFB-201ENST00000331163 ANAPC13Q9BS18 74 aa11.56□□□□□ -0.56
PDGFB-201ENST00000331163 NFE4Q86UQ8 179 aa11.55□□□□□ -0.56
PDGFB-201ENST00000331163 Q9UF83 564 aa11.55□□□□□ -0.56
PDGFB-201ENST00000331163 M0R2P5 195 aa11.55□□□□□ -0.56
PDGFB-201ENST00000331163 XGP55808 180 aa11.55□□□□□ -0.56
PDGFB-201ENST00000331163 SUMO2P61956 95 aaKnown RBP11.55□□□□□ -0.56
PDGFB-201ENST00000331163 C1orf158Q8N1D5 194 aa11.55□□□□□ -0.56
PDGFB-201ENST00000331163 H7C1H1 209 aa11.55□□□□□ -0.56
PDGFB-201ENST00000331163 DAD1P61803 113 aa11.55□□□□□ -0.56
PDGFB-201ENST00000331163 Q1RN00 199 aa11.55□□□□□ -0.56
PDGFB-201ENST00000331163 TRBV6-1A0A0K0K1D8 114 aa11.54□□□□□ -0.56
PDGFB-201ENST00000331163 CMC4P56277 68 aaPredicted RBP11.54□□□□□ -0.56
PDGFB-201ENST00000331163 TMEM170BQ5T4T1 132 aa11.54□□□□□ -0.56
PDGFB-201ENST00000331163 STAB2Q8WWQ8 2551 aa11.54□□□□□ -0.56
PDGFB-201ENST00000331163 F8VRH5 84 aa11.54□□□□□ -0.56
PDGFB-201ENST00000331163 TMEM238LA0A1B0GVL6 79 aa11.53□□□□□ -0.56
PDGFB-201ENST00000331163 PLNP26678 52 aa11.53□□□□□ -0.56
PDGFB-201ENST00000331163 RPL39P62891 51 aaKnown RBP11.53□□□□□ -0.56
PDGFB-201ENST00000331163 KLK9Q2XQG4 91 aa11.53□□□□□ -0.56
PDGFB-201ENST00000331163 TRPT1Q86TN4 253 aaKnown RBP11.53□□□□□ -0.56
PDGFB-201ENST00000331163 B5MCH6 92 aa11.53□□□□□ -0.56
PDGFB-201ENST00000331163 APOC4P55056 127 aa11.53□□□□□ -0.56
PDGFB-201ENST00000331163 FAM222AQ5U5X8 452 aa11.53□□□□□ -0.56
PDGFB-201ENST00000331163 CFAP161Q6P656 301 aa11.53□□□□□ -0.56
PDGFB-201ENST00000331163 MORN3Q6PF18 240 aaPredicted RBP11.53□□□□□ -0.56
PDGFB-201ENST00000331163 CEMP1Q6PRD7 247 aaPredicted RBP11.53□□□□□ -0.56
PDGFB-201ENST00000331163 ZMAT4Q9H898 229 aa11.53□□□□□ -0.56
PDGFB-201ENST00000331163 ANK3Q12955 4377 aaKnown RBP11.52□□□□□ -0.56
PDGFB-201ENST00000331163 TRBV20-1A0A075B6N2 111 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms