RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 SS18Q15532 418 aa10.6□□□□□ -0.71
EPHB3-201ENST00000330394 CCDC179H3BU77 68 aa10.6□□□□□ -0.71
EPHB3-201ENST00000330394 CRLF1O75462 422 aa10.6□□□□□ -0.71
EPHB3-201ENST00000330394 XCL1P47992 114 aa10.6□□□□□ -0.71
EPHB3-201ENST00000330394 EXPH5Q8NEV8 1989 aa10.59□□□□□ -0.71
EPHB3-201ENST00000330394 FSTL3O95633 263 aa10.59□□□□□ -0.71
EPHB3-201ENST00000330394 NOP10Q9NPE3 64 aaKnown RBP10.59□□□□□ -0.71
EPHB3-201ENST00000330394 ACYP1P07311 99 aa10.59□□□□□ -0.71
EPHB3-201ENST00000330394 DEFB112Q30KQ8 113 aa10.59□□□□□ -0.71
EPHB3-201ENST00000330394 SLURP1P55000 103 aa10.59□□□□□ -0.71
EPHB3-201ENST00000330394 PRRC2AP48634 2157 aaKnown RBP10.59□□□□□ -0.71
EPHB3-201ENST00000330394 A0A0B4J2C4 111 aa10.58□□□□□ -0.72
EPHB3-201ENST00000330394 IGHV3-30P01768 117 aa10.58□□□□□ -0.72
EPHB3-201ENST00000330394 IGHV3-30-5P0DP03 117 aa10.58□□□□□ -0.72
EPHB3-201ENST00000330394 VSIG2Q96IQ7 327 aa10.58□□□□□ -0.72
EPHB3-201ENST00000330394 CDKN2A-AS1Q9UH64 79 aa10.58□□□□□ -0.72
EPHB3-201ENST00000330394 LECT2O14960 151 aa10.57□□□□□ -0.72
EPHB3-201ENST00000330394 LY6LH3BQJ8 138 aa10.57□□□□□ -0.72
EPHB3-201ENST00000330394 ATP5G1P05496 136 aa10.57□□□□□ -0.72
EPHB3-201ENST00000330394 LINC01619G3V211 115 aa10.56□□□□□ -0.72
EPHB3-201ENST00000330394 MED14OSP0DP75 135 aa10.56□□□□□ -0.72
EPHB3-201ENST00000330394 CRIP2P52943 208 aaPredicted RBP10.56□□□□□ -0.72
EPHB3-201ENST00000330394 SIRPDQ9H106 197 aa10.56□□□□□ -0.72
EPHB3-201ENST00000330394 LRRK2Q5S007 2527 aa10.56□□□□□ -0.72
EPHB3-201ENST00000330394 Q8NA96 180 aa10.56□□□□□ -0.72
EPHB3-201ENST00000330394 IGLV4-3A0A075B6K6 122 aa10.55□□□□□ -0.72
EPHB3-201ENST00000330394 PROK1P58294 105 aa10.55□□□□□ -0.72
EPHB3-201ENST00000330394 MIAQ16674 131 aa10.55□□□□□ -0.72
EPHB3-201ENST00000330394 ODF3BA8MYP8 253 aa10.55□□□□□ -0.72
EPHB3-201ENST00000330394 C14orf132Q9NPU4 83 aa10.55□□□□□ -0.72
EPHB3-201ENST00000330394 MIR7-3HGQ8N6C7 128 aa10.55□□□□□ -0.72
EPHB3-201ENST00000330394 RNASE3P12724 160 aaKnown RBP10.54□□□□□ -0.72
EPHB3-201ENST00000330394 A0A0J9YX75 114 aa10.54□□□□□ -0.72
EPHB3-201ENST00000330394 LINC01356Q8N9X3 169 aa10.54□□□□□ -0.72
EPHB3-201ENST00000330394 TMEM223A0PJW6 202 aa10.54□□□□□ -0.72
EPHB3-201ENST00000330394 DAZ2Q13117 558 aaKnown RBP10.54□□□□□ -0.72
EPHB3-201ENST00000330394 DAZ4Q86SG3 579 aaKnown RBP10.54□□□□□ -0.72
EPHB3-201ENST00000330394 DAZ3Q9NR90 486 aaKnown RBP10.54□□□□□ -0.72
EPHB3-201ENST00000330394 H3BUA1 57 aa10.54□□□□□ -0.72
EPHB3-201ENST00000330394 RBMY1FQ15415 496 aaKnown RBP10.54□□□□□ -0.72
EPHB3-201ENST00000330394 NBEAQ8NFP9 2946 aa10.53□□□□□ -0.72
EPHB3-201ENST00000330394 IGHV4OR15-8A0A075B7B6 117 aa10.53□□□□□ -0.72
EPHB3-201ENST00000330394 A0A087WW49 117 aa10.53□□□□□ -0.72
EPHB3-201ENST00000330394 ATOX1O00244 68 aa10.53□□□□□ -0.72
EPHB3-201ENST00000330394 CNFNQ9BYD5 112 aa10.53□□□□□ -0.72
EPHB3-201ENST00000330394 EYSQ5T1H1 3165 aa10.53□□□□□ -0.72
EPHB3-201ENST00000330394 GHRHP01286 108 aa10.53□□□□□ -0.72
EPHB3-201ENST00000330394 PRM2P04554 102 aa10.53□□□□□ -0.72
EPHB3-201ENST00000330394 ORMDL1Q9P0S3 153 aa10.53□□□□□ -0.72
EPHB3-201ENST00000330394 IGHV4-30-2A0A087WSY4 118 aa10.52□□□□□ -0.72
EPHB3-201ENST00000330394 SDIM1Q6ZPB5 146 aa10.52□□□□□ -0.72
EPHB3-201ENST00000330394 LINC00643Q86TS7 51 aa10.52□□□□□ -0.72
EPHB3-201ENST00000330394 MGAQ8IWI9 3026 aa10.52□□□□□ -0.73
EPHB3-201ENST00000330394 IGLV10-54A0A075B6I4 117 aa10.52□□□□□ -0.73
EPHB3-201ENST00000330394 ADORA2A-AS1P86434 159 aa10.52□□□□□ -0.73
EPHB3-201ENST00000330394 RBM3P98179 157 aaKnown RBP10.52□□□□□ -0.73
EPHB3-201ENST00000330394 M0QY20 66 aa10.51□□□□□ -0.73
EPHB3-201ENST00000330394 PIK3CD-AS1Q5SR53 167 aa10.51□□□□□ -0.73
EPHB3-201ENST00000330394 NRGNQ92686 78 aa10.51□□□□□ -0.73
EPHB3-201ENST00000330394 ZMAT4Q9H898 229 aa10.51□□□□□ -0.73
EPHB3-201ENST00000330394 TRAV25A0A0B4J276 109 aa10.51□□□□□ -0.73
EPHB3-201ENST00000330394 J3KT08 172 aa10.51□□□□□ -0.73
EPHB3-201ENST00000330394 ANGP03950 147 aaKnown RBP10.51□□□□□ -0.73
EPHB3-201ENST00000330394 ELANEP08246 267 aa10.51□□□□□ -0.73
EPHB3-201ENST00000330394 HIST2H2BCQ6DN03 193 aa10.51□□□□□ -0.73
EPHB3-201ENST00000330394 Q6ZSV7 163 aa10.51□□□□□ -0.73
EPHB3-201ENST00000330394 ADAMTS20P59510 1910 aa10.51□□□□□ -0.73
EPHB3-201ENST00000330394 IGHG2P01859 326 aa10.5□□□□□ -0.73
EPHB3-201ENST00000330394 UBE2D1P51668 147 aa10.5□□□□□ -0.73
EPHB3-201ENST00000330394 LINC00467Q9BRT7 94 aa10.5□□□□□ -0.73
EPHB3-201ENST00000330394 FRYLO94915 3013 aa10.5□□□□□ -0.73
EPHB3-201ENST00000330394 IGHV4-4A0A075B6R2 117 aa10.5□□□□□ -0.73
EPHB3-201ENST00000330394 TMEM61Q8N0U2 210 aa10.5□□□□□ -0.73
EPHB3-201ENST00000330394 DPH3Q96FX2 82 aa10.5□□□□□ -0.73
EPHB3-201ENST00000330394 TSPEAR-AS2P59090 65 aa10.49□□□□□ -0.73
EPHB3-201ENST00000330394 POLR2KP53803 58 aaKnown RBP10.49□□□□□ -0.73
EPHB3-201ENST00000330394 TRBV30A0A0K0K1B3 111 aa10.49□□□□□ -0.73
EPHB3-201ENST00000330394 TRBV27A0A0K0K1C4 114 aa10.49□□□□□ -0.73
EPHB3-201ENST00000330394 GATA3P23771 443 aa10.49□□□□□ -0.73
EPHB3-201ENST00000330394 DSCR8Q96T75 97 aa10.49□□□□□ -0.73
EPHB3-201ENST00000330394 SPANXDQ9BXN6 97 aa10.49□□□□□ -0.73
EPHB3-201ENST00000330394 PRO3102Q9H379 93 aa10.49□□□□□ -0.73
EPHB3-201ENST00000330394 RPL32P62910 135 aaKnown RBP10.48□□□□□ -0.73
EPHB3-201ENST00000330394 ZNF580Q9UK33 172 aa10.48□□□□□ -0.73
EPHB3-201ENST00000330394 DSCR9P59020 149 aa10.48□□□□□ -0.73
EPHB3-201ENST00000330394 LMO4P61968 165 aa10.48□□□□□ -0.73
EPHB3-201ENST00000330394 ESM1Q9NQ30 184 aa10.48□□□□□ -0.73
EPHB3-201ENST00000330394 DSPP15924 2871 aaKnown RBP10.48□□□□□ -0.73
EPHB3-201ENST00000330394 COX7A2LO14548 114 aa10.48□□□□□ -0.73
EPHB3-201ENST00000330394 C10orf99Q6UWK7 81 aa10.48□□□□□ -0.73
EPHB3-201ENST00000330394 COX7B2Q8TF08 81 aa10.48□□□□□ -0.73
EPHB3-201ENST00000330394 hADV29S1A0JD25 119 aa10.47□□□□□ -0.73
EPHB3-201ENST00000330394 H0YGX0 51 aa10.47□□□□□ -0.73
EPHB3-201ENST00000330394 CLPSL1A2RUU4 121 aa10.47□□□□□ -0.73
EPHB3-201ENST00000330394 K7EMT4 169 aa10.47□□□□□ -0.73
EPHB3-201ENST00000330394 GPHB5Q86YW7 130 aa10.47□□□□□ -0.73
EPHB3-201ENST00000330394 SLPIP03973 132 aa10.47□□□□□ -0.73
EPHB3-201ENST00000330394 COL5A1P20908 1838 aaPredicted RBP10.47□□□□□ -0.73
EPHB3-201ENST00000330394 TRAV23DV6A0A075B6W5 121 aa10.47□□□□□ -0.73
EPHB3-201ENST00000330394 F8W735 103 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms