RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SMAGPQ0VAQ4 97 aa11.27□□□□□ -0.61
BRCC3-201ENST00000330045 FOXI1Q12951 378 aa11.27□□□□□ -0.61
BRCC3-201ENST00000330045 ATP6V0E2Q8NHE4 81 aa11.27□□□□□ -0.61
BRCC3-201ENST00000330045 PRO1854Q9UHT4 67 aa11.27□□□□□ -0.61
BRCC3-201ENST00000330045 IGHV3-64A0A075B6Q5 118 aa11.27□□□□□ -0.61
BRCC3-201ENST00000330045 ZNF418Q8TF45 676 aaPredicted RBP11.27□□□□□ -0.61
BRCC3-201ENST00000330045 ANK3Q12955 4377 aaKnown RBP11.26□□□□□ -0.61
BRCC3-201ENST00000330045 TRBV20-1A0A075B6N2 111 aa11.26□□□□□ -0.61
BRCC3-201ENST00000330045 IGHV3-73A0A0B4J1V6 119 aa11.26□□□□□ -0.61
BRCC3-201ENST00000330045 SCGB1A1P11684 91 aa11.26□□□□□ -0.61
BRCC3-201ENST00000330045 EDA2RQ9HAV5 297 aa11.26□□□□□ -0.61
BRCC3-201ENST00000330045 TCL1BO95988 128 aa11.26□□□□□ -0.61
BRCC3-201ENST00000330045 DEFB131AP59861 70 aa11.26□□□□□ -0.61
BRCC3-201ENST00000330045 Q6YL49 198 aa11.26□□□□□ -0.61
BRCC3-201ENST00000330045 NOTCH2Q04721 2471 aa11.25□□□□□ -0.61
BRCC3-201ENST00000330045 A4D1N5 150 aa11.25□□□□□ -0.61
BRCC3-201ENST00000330045 PROK1P58294 105 aa11.25□□□□□ -0.61
BRCC3-201ENST00000330045 LRRC75A-AS1Q8N1F1 130 aa11.25□□□□□ -0.61
BRCC3-201ENST00000330045 PYGO1Q9Y3Y4 419 aa11.25□□□□□ -0.61
BRCC3-201ENST00000330045 SLURP1P55000 103 aa11.24□□□□□ -0.61
BRCC3-201ENST00000330045 MYO9AB2RTY4 2548 aa11.24□□□□□ -0.61
BRCC3-201ENST00000330045 TRAV2A0A0B4J234 112 aa11.24□□□□□ -0.61
BRCC3-201ENST00000330045 SCGB1C2P0DMR2 95 aa11.24□□□□□ -0.61
BRCC3-201ENST00000330045 CD28P10747 220 aa11.24□□□□□ -0.61
BRCC3-201ENST00000330045 TNFRSF18Q9Y5U5 241 aa11.24□□□□□ -0.61
BRCC3-201ENST00000330045 H3BMM0 161 aa11.23□□□□□ -0.61
BRCC3-201ENST00000330045 FSHBP01225 129 aa11.23□□□□□ -0.61
BRCC3-201ENST00000330045 DEFB136Q30KP8 78 aa11.23□□□□□ -0.61
BRCC3-201ENST00000330045 C18orf65Q6ZTR6 163 aa11.23□□□□□ -0.61
BRCC3-201ENST00000330045 MUSTN1Q8IVN3 82 aa11.23□□□□□ -0.61
BRCC3-201ENST00000330045 PTH2Q96A98 100 aa11.23□□□□□ -0.61
BRCC3-201ENST00000330045 DUX3Q96PT4 197 aa11.23□□□□□ -0.61
BRCC3-201ENST00000330045 SPXQ9BT56 116 aa11.23□□□□□ -0.61
BRCC3-201ENST00000330045 A8MTW9 85 aa11.22□□□□□ -0.61
BRCC3-201ENST00000330045 A8MWV9 139 aa11.22□□□□□ -0.61
BRCC3-201ENST00000330045 M0R2P5 195 aa11.22□□□□□ -0.61
BRCC3-201ENST00000330045 PRM2P04554 102 aa11.22□□□□□ -0.61
BRCC3-201ENST00000330045 FAM104AQ969W3 186 aa11.22□□□□□ -0.61
BRCC3-201ENST00000330045 MTORP42345 2549 aa11.22□□□□□ -0.61
BRCC3-201ENST00000330045 RAX2Q96IS3 184 aa11.21□□□□□ -0.61
BRCC3-201ENST00000330045 RBMY1BA6NDE4 496 aaKnown RBP11.21□□□□□ -0.61
BRCC3-201ENST00000330045 RBMY1EA6NEQ0 496 aaKnown RBP11.21□□□□□ -0.61
BRCC3-201ENST00000330045 RBMY1DP0C7P1 496 aaKnown RBP11.21□□□□□ -0.61
BRCC3-201ENST00000330045 IGHV3-30-3P0DP02 117 aa11.21□□□□□ -0.61
BRCC3-201ENST00000330045 CRYBA4P53673 196 aa11.21□□□□□ -0.61
BRCC3-201ENST00000330045 MRPS36P82909 103 aaKnown RBP11.21□□□□□ -0.61
BRCC3-201ENST00000330045 CEMP1Q6PRD7 247 aaPredicted RBP11.21□□□□□ -0.61
BRCC3-201ENST00000330045 TMEM263Q8WUH6 116 aaKnown RBP11.21□□□□□ -0.61
BRCC3-201ENST00000330045 A0A0J9YXY3 114 aa11.2□□□□□ -0.62
BRCC3-201ENST00000330045 EIF4EBP3O60516 100 aaPredicted RBP11.2□□□□□ -0.62
BRCC3-201ENST00000330045 IGHV3-33P01772 117 aa11.2□□□□□ -0.62
BRCC3-201ENST00000330045 TEN1Q86WV5 123 aa11.2□□□□□ -0.62
BRCC3-201ENST00000330045 SBSPONQ8IVN8 264 aa11.2□□□□□ -0.62
BRCC3-201ENST00000330045 A0A0B4J2C4 111 aa11.2□□□□□ -0.62
BRCC3-201ENST00000330045 TIMM21Q9BVV7 248 aa11.2□□□□□ -0.62
BRCC3-201ENST00000330045 ZNF415Q09FC8 603 aa11.19□□□□□ -0.62
BRCC3-201ENST00000330045 PPDPFLQ8WWR9 84 aa11.19□□□□□ -0.62
BRCC3-201ENST00000330045 Q9UF83 564 aa11.19□□□□□ -0.62
BRCC3-201ENST00000330045 ERG28Q9UKR5 140 aa11.19□□□□□ -0.62
BRCC3-201ENST00000330045 PIK3CD-AS1Q5SR53 167 aa11.19□□□□□ -0.62
BRCC3-201ENST00000330045 TMEM61Q8N0U2 210 aa11.19□□□□□ -0.62
BRCC3-201ENST00000330045 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.18□□□□□ -0.62
BRCC3-201ENST00000330045 RNASE13Q5GAN3 156 aaKnown RBP11.18□□□□□ -0.62
BRCC3-201ENST00000330045 HIST2H2BDQ6DRA6 164 aa11.18□□□□□ -0.62
BRCC3-201ENST00000330045 Q6ZSN1 163 aa11.18□□□□□ -0.62
BRCC3-201ENST00000330045 CARD19Q96LW7 228 aa11.18□□□□□ -0.62
BRCC3-201ENST00000330045 PEMTQ9UBM1 199 aa11.18□□□□□ -0.62
BRCC3-201ENST00000330045 TRAV8-3A0A0A6YYJ7 113 aa11.17□□□□□ -0.62
BRCC3-201ENST00000330045 ADARB2-AS1A8MUL3 147 aa11.17□□□□□ -0.62
BRCC3-201ENST00000330045 H7C2G1 150 aa11.17□□□□□ -0.62
BRCC3-201ENST00000330045 CHCHD7Q9BUK0 85 aa11.17□□□□□ -0.62
BRCC3-201ENST00000330045 IGHV1-58A0A0C4DH39 117 aa11.17□□□□□ -0.62
BRCC3-201ENST00000330045 CDIP1Q9H305 208 aa11.17□□□□□ -0.62
BRCC3-201ENST00000330045 SETD2Q9BYW2 2564 aaPredicted RBP11.16□□□□□ -0.62
BRCC3-201ENST00000330045 LINC01587Q99440 93 aa11.16□□□□□ -0.62
BRCC3-201ENST00000330045 SPANXA1Q9NS26 97 aa11.16□□□□□ -0.62
BRCC3-201ENST00000330045 UBE2D4Q9Y2X8 147 aa11.16□□□□□ -0.62
BRCC3-201ENST00000330045 NACAE9PAV3 2078 aa11.16□□□□□ -0.62
BRCC3-201ENST00000330045 MAP6D1Q9H9H5 199 aa11.16□□□□□ -0.62
BRCC3-201ENST00000330045 TINCRA0A1B0GVN0 87 aa11.15□□□□□ -0.62
BRCC3-201ENST00000330045 Q8N2B8 174 aa11.15□□□□□ -0.62
BRCC3-201ENST00000330045 LITAFQ99732 161 aa11.15□□□□□ -0.62
BRCC3-201ENST00000330045 OTOGQ6ZRI0 2925 aa11.15□□□□□ -0.62
BRCC3-201ENST00000330045 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.15□□□□□ -0.62
BRCC3-201ENST00000330045 IGKV2-29A2NJV5 120 aaPredicted RBP11.15□□□□□ -0.62
BRCC3-201ENST00000330045 ANKRD29Q8N6D5 301 aa11.15□□□□□ -0.62
BRCC3-201ENST00000330045 SLC25A20O43772 301 aa11.14□□□□□ -0.63
BRCC3-201ENST00000330045 FHL3Q13643 280 aa11.14□□□□□ -0.63
BRCC3-201ENST00000330045 Q1RN00 199 aa11.14□□□□□ -0.63
BRCC3-201ENST00000330045 KHDC1LQ5JSQ8 128 aa11.14□□□□□ -0.63
BRCC3-201ENST00000330045 C11orf72Q8NBR9 251 aa11.14□□□□□ -0.63
BRCC3-201ENST00000330045 DYNLRB2Q8TF09 96 aa11.14□□□□□ -0.63
BRCC3-201ENST00000330045 C4orf3Q8WVX3 66 aa11.14□□□□□ -0.63
BRCC3-201ENST00000330045 NDUFA12Q9UI09 145 aa11.14□□□□□ -0.63
BRCC3-201ENST00000330045 C9JAW5 83 aa11.14□□□□□ -0.63
BRCC3-201ENST00000330045 IGHV3-53P01767 116 aa11.14□□□□□ -0.63
BRCC3-201ENST00000330045 PRSS2P07478 247 aa11.14□□□□□ -0.63
BRCC3-201ENST00000330045 KRTAP1-1Q07627 177 aa11.14□□□□□ -0.63
BRCC3-201ENST00000330045 VSIG2Q96IQ7 327 aa11.14□□□□□ -0.63
BRCC3-201ENST00000330045 DNAJC30Q96LL9 226 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms