RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 IGKV2D-24A0A075B6R9 120 aa12.52□□□□□ -0.41
CIRBP-201ENST00000320936 A0A087WTM6 91 aa12.52□□□□□ -0.41
CIRBP-201ENST00000320936 APCSP02743 223 aa12.52□□□□□ -0.41
CIRBP-201ENST00000320936 PMCHP20382 165 aa12.52□□□□□ -0.41
CIRBP-201ENST00000320936 RPS10P46783 165 aaKnown RBP12.52□□□□□ -0.41
CIRBP-201ENST00000320936 RBX1P62877 108 aa12.51□□□□□ -0.41
CIRBP-201ENST00000320936 FAM104BQ5XKR9 115 aa12.51□□□□□ -0.41
CIRBP-201ENST00000320936 TRBV6-5A0A0K0K1A5 114 aa12.5□□□□□ -0.41
CIRBP-201ENST00000320936 LINC00862A6NCI5 91 aa12.5□□□□□ -0.41
CIRBP-201ENST00000320936 I3L3M4 83 aa12.5□□□□□ -0.41
CIRBP-201ENST00000320936 Q0VG73 95 aa12.5□□□□□ -0.41
CIRBP-201ENST00000320936 MRPL51Q4U2R6 128 aaKnown RBP12.5□□□□□ -0.41
CIRBP-201ENST00000320936 CLPSL2Q6UWE3 100 aa12.5□□□□□ -0.41
CIRBP-201ENST00000320936 ATP5L2Q7Z4Y8 100 aa12.5□□□□□ -0.41
CIRBP-201ENST00000320936 SEC11CQ9BY50 192 aa12.5□□□□□ -0.41
CIRBP-201ENST00000320936 A0A1B0GXF2 115 aa12.49□□□□□ -0.41
CIRBP-201ENST00000320936 PPP1R17O96001 155 aa12.49□□□□□ -0.41
CIRBP-201ENST00000320936 CKS2P33552 79 aa12.49□□□□□ -0.41
CIRBP-201ENST00000320936 KRTAP10-2P60368 255 aa12.49□□□□□ -0.41
CIRBP-201ENST00000320936 TMEM70Q9BUB7 260 aa12.49□□□□□ -0.41
CIRBP-201ENST00000320936 COX11Q9Y6N1 276 aa12.49□□□□□ -0.41
CIRBP-201ENST00000320936 DNAH11Q96DT5 4516 aa12.49□□□□□ -0.41
CIRBP-201ENST00000320936 C1orf43Q9BWL3 253 aa12.48□□□□□ -0.41
CIRBP-201ENST00000320936 TMEM242Q9NWH2 141 aa12.48□□□□□ -0.41
CIRBP-201ENST00000320936 AMMECR1LQ6DCA0 310 aa12.47□□□□□ -0.41
CIRBP-201ENST00000320936 LINC00269Q8N2A0 174 aa12.47□□□□□ -0.41
CIRBP-201ENST00000320936 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.46□□□□□ -0.41
CIRBP-201ENST00000320936 IGKV2-29A2NJV5 120 aaPredicted RBP12.46□□□□□ -0.41
CIRBP-201ENST00000320936 FUSP35637 526 aaKnown RBP eCLIP12.46□□□□□ -0.41
CIRBP-201ENST00000320936 NRACQ8N912 160 aa12.46□□□□□ -0.41
CIRBP-201ENST00000320936 D6R8Y8 96 aa12.45□□□□□ -0.42
CIRBP-201ENST00000320936 LECT2O14960 151 aa12.45□□□□□ -0.42
CIRBP-201ENST00000320936 TSHBP01222 138 aa12.45□□□□□ -0.42
CIRBP-201ENST00000320936 FCER1GP30273 86 aa12.45□□□□□ -0.42
CIRBP-201ENST00000320936 SUMO2P61956 95 aaKnown RBP12.45□□□□□ -0.42
CIRBP-201ENST00000320936 RNASEKQ6P5S7 137 aaKnown RBP12.45□□□□□ -0.42
CIRBP-201ENST00000320936 ENHOQ6UWT2 76 aa12.45□□□□□ -0.42
CIRBP-201ENST00000320936 BTF3L4Q96K17 158 aa12.45□□□□□ -0.42
CIRBP-201ENST00000320936 LRCOL1A6NCL2 159 aa12.44□□□□□ -0.42
CIRBP-201ENST00000320936 MIAQ16674 131 aa12.44□□□□□ -0.42
CIRBP-201ENST00000320936 CTDSP1Q9GZU7 261 aa12.44□□□□□ -0.42
CIRBP-201ENST00000320936 IGLV4-60A0A075B6I1 120 aa12.43□□□□□ -0.42
CIRBP-201ENST00000320936 TRBV27A0A0K0K1C4 114 aa12.43□□□□□ -0.42
CIRBP-201ENST00000320936 VCYO14598 125 aa12.43□□□□□ -0.42
CIRBP-201ENST00000320936 POLR2KP53803 58 aaKnown RBP12.43□□□□□ -0.42
CIRBP-201ENST00000320936 BAALCQ8WXS3 180 aa12.43□□□□□ -0.42
CIRBP-201ENST00000320936 PGPEP1Q9NXJ5 209 aa12.43□□□□□ -0.42
CIRBP-201ENST00000320936 A0A1B0GUV1 79 aa12.42□□□□□ -0.42
CIRBP-201ENST00000320936 HLA-DQA1P01909 254 aa12.42□□□□□ -0.42
CIRBP-201ENST00000320936 REG3AQ06141 175 aa12.42□□□□□ -0.42
CIRBP-201ENST00000320936 C20orf203Q8NBC4 194 aa12.42□□□□□ -0.42
CIRBP-201ENST00000320936 IMMP2LQ96T52 175 aa12.42□□□□□ -0.42
CIRBP-201ENST00000320936 KIR2DL4Q99706 377 aa12.42□□□□□ -0.42
CIRBP-201ENST00000320936 TNFRSF6BO95407 300 aa12.41□□□□□ -0.42
CIRBP-201ENST00000320936 PPBPP02775 128 aa12.41□□□□□ -0.42
CIRBP-201ENST00000320936 FGF6P10767 208 aa12.41□□□□□ -0.42
CIRBP-201ENST00000320936 S100PP25815 95 aa12.41□□□□□ -0.42
CIRBP-201ENST00000320936 CDPF1Q6NVV7 123 aa12.41□□□□□ -0.42
CIRBP-201ENST00000320936 ORMDL3Q8N138 153 aa12.41□□□□□ -0.42
CIRBP-201ENST00000320936 Q8N814 137 aa12.41□□□□□ -0.42
CIRBP-201ENST00000320936 PRR34Q9NV39 138 aa12.41□□□□□ -0.42
CIRBP-201ENST00000320936 IGLV10-54A0A075B6I4 117 aa12.4□□□□□ -0.42
CIRBP-201ENST00000320936 IGKV3OR2-268A0A0C4DH90 116 aa12.4□□□□□ -0.42
CIRBP-201ENST00000320936 C7orf77A4D0Y5 90 aa12.4□□□□□ -0.42
CIRBP-201ENST00000320936 H7C423 109 aa12.4□□□□□ -0.42
CIRBP-201ENST00000320936 WFDC2Q14508 124 aa12.4□□□□□ -0.42
CIRBP-201ENST00000320936 MAPKAPK5-AS1Q8N8E1 139 aa12.4□□□□□ -0.42
CIRBP-201ENST00000320936 TMEM101Q96IK0 257 aa12.4□□□□□ -0.42
CIRBP-201ENST00000320936 C20orf78Q9BR46 151 aa12.4□□□□□ -0.42
CIRBP-201ENST00000320936 CARHSP1Q9Y2V2 147 aaKnown RBP12.4□□□□□ -0.42
CIRBP-201ENST00000320936 IGLV5-52A0A0A0MRZ9 124 aa12.39□□□□□ -0.43
CIRBP-201ENST00000320936 NPYP01303 97 aa12.39□□□□□ -0.43
CIRBP-201ENST00000320936 C10orf91Q5T1B1 145 aa12.39□□□□□ -0.43
CIRBP-201ENST00000320936 PRELID3AQ96N28 172 aa12.39□□□□□ -0.43
CIRBP-201ENST00000320936 RPS10P5Q9NQ39 176 aa12.39□□□□□ -0.43
CIRBP-201ENST00000320936 DYNC1H1Q14204 4646 aaKnown RBP12.39□□□□□ -0.43
CIRBP-201ENST00000320936 TRBV24-1A0A075B6N3 115 aa12.38□□□□□ -0.43
CIRBP-201ENST00000320936 RHEBQ15382 184 aa12.38□□□□□ -0.43
CIRBP-201ENST00000320936 NDUFA5Q16718 116 aa12.38□□□□□ -0.43
CIRBP-201ENST00000320936 TMEM136Q6ZRR5 245 aa12.38□□□□□ -0.43
CIRBP-201ENST00000320936 ESDP10768 282 aa12.37□□□□□ -0.43
CIRBP-201ENST00000320936 ZNF25P17030 456 aaPredicted RBP12.37□□□□□ -0.43
CIRBP-201ENST00000320936 CLRN3Q8NCR9 226 aa12.37□□□□□ -0.43
CIRBP-201ENST00000320936 OR5A1Q8NGJ0 315 aa12.37□□□□□ -0.43
CIRBP-201ENST00000320936 NTN5Q8WTR8 489 aaPredicted RBP12.37□□□□□ -0.43
CIRBP-201ENST00000320936 SMIM2Q9BVW6 85 aa12.37□□□□□ -0.43
CIRBP-201ENST00000320936 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.37□□□□□ -0.43
CIRBP-201ENST00000320936 TRAV9-1A0A075B6T8 112 aa12.37□□□□□ -0.43
CIRBP-201ENST00000320936 PHOX2AO14813 284 aa12.37□□□□□ -0.43
CIRBP-201ENST00000320936 APOC3P02656 99 aa12.37□□□□□ -0.43
CIRBP-201ENST00000320936 TRAV8-4A0A0B4J246 113 aa12.36□□□□□ -0.43
CIRBP-201ENST00000320936 DGAT2L7PQ6IED9 249 aa12.36□□□□□ -0.43
CIRBP-201ENST00000320936 TCAPO15273 167 aa12.35□□□□□ -0.43
CIRBP-201ENST00000320936 RPL32P62910 135 aaKnown RBP12.35□□□□□ -0.43
CIRBP-201ENST00000320936 SMAGPQ0VAQ4 97 aa12.35□□□□□ -0.43
CIRBP-201ENST00000320936 LOC389332A0A1B0GUA5 103 aa12.34□□□□□ -0.43
CIRBP-201ENST00000320936 GCSHP23434 173 aa12.34□□□□□ -0.43
CIRBP-201ENST00000320936 C14orf177Q52M58 125 aa12.34□□□□□ -0.43
CIRBP-201ENST00000320936 TMEM18Q96B42 140 aa12.34□□□□□ -0.43
CIRBP-201ENST00000320936 MAP1LC3AQ9H492 121 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms