RNA–Protein interactions for RNA: ENST00000317419.7

RABGAP1-201, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 2,186 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-201ENST00000317419 NXT2Q9NPJ8 142 aaKnown RBP12.94□□□□□ -0.34
RABGAP1-201ENST00000317419 IGHV1-24A0A0C4DH33 117 aa12.93□□□□□ -0.34
RABGAP1-201ENST00000317419 LINC00476Q8WZB0 136 aa12.93□□□□□ -0.34
RABGAP1-201ENST00000317419 CHCHD7Q9BUK0 85 aa12.93□□□□□ -0.34
RABGAP1-201ENST00000317419 TRBV25-1A0A075B6N4 114 aa12.93□□□□□ -0.34
RABGAP1-201ENST00000317419 K7EMI3 77 aa12.93□□□□□ -0.34
RABGAP1-201ENST00000317419 IFI27P40305 119 aaPredicted RBP12.93□□□□□ -0.34
RABGAP1-201ENST00000317419 DEFB104AQ8WTQ1 72 aa12.92□□□□□ -0.34
RABGAP1-201ENST00000317419 TRAV8-6A0A0B4J262 113 aa12.91□□□□□ -0.34
RABGAP1-201ENST00000317419 AMTP48728 403 aa12.91□□□□□ -0.34
RABGAP1-201ENST00000317419 Q0VG73 95 aa12.91□□□□□ -0.34
RABGAP1-201ENST00000317419 WFDC10BQ8IUB3 73 aa12.91□□□□□ -0.34
RABGAP1-201ENST00000317419 URB1-AS1Q96HZ7 61 aa12.91□□□□□ -0.34
RABGAP1-201ENST00000317419 UBE2DNLQ8IWF7 75 aa12.9□□□□□ -0.34
RABGAP1-201ENST00000317419 TMEM243Q9BU79 118 aa12.9□□□□□ -0.34
RABGAP1-201ENST00000317419 DNAH6Q9C0G6 4158 aa12.9□□□□□ -0.34
RABGAP1-201ENST00000317419 FCER1GP30273 86 aa12.89□□□□□ -0.35
RABGAP1-201ENST00000317419 NIT1Q86X76 327 aa12.89□□□□□ -0.35
RABGAP1-201ENST00000317419 PRSS3P2Q8NHM4 247 aa12.89□□□□□ -0.35
RABGAP1-201ENST00000317419 H7C423 109 aa12.88□□□□□ -0.35
RABGAP1-201ENST00000317419 DNAH10OSP0CZ25 163 aa12.88□□□□□ -0.35
RABGAP1-201ENST00000317419 Q9H8V8 135 aa12.87□□□□□ -0.35
RABGAP1-201ENST00000317419 SIVA1O15304 175 aa12.87□□□□□ -0.35
RABGAP1-201ENST00000317419 LAGE3Q14657 143 aa12.87□□□□□ -0.35
RABGAP1-201ENST00000317419 LINC01556Q5JQF7 62 aa12.87□□□□□ -0.35
RABGAP1-201ENST00000317419 C20orf203Q8NBC4 194 aa12.87□□□□□ -0.35
RABGAP1-201ENST00000317419 HIST1H2BKO60814 126 aa12.86□□□□□ -0.35
RABGAP1-201ENST00000317419 HIST1H2BJP06899 126 aa12.86□□□□□ -0.35
RABGAP1-201ENST00000317419 HIST1H2BOP23527 126 aa12.86□□□□□ -0.35
RABGAP1-201ENST00000317419 HIST1H2BBP33778 126 aa12.86□□□□□ -0.35
RABGAP1-201ENST00000317419 HIST1H2BDP58876 126 aa12.86□□□□□ -0.35
RABGAP1-201ENST00000317419 PKIAP61925 76 aa12.86□□□□□ -0.35
RABGAP1-201ENST00000317419 HIST1H2BCP62807 126 aa12.86□□□□□ -0.35
RABGAP1-201ENST00000317419 HIST2H2BEQ16778 126 aa12.86□□□□□ -0.35
RABGAP1-201ENST00000317419 ORMDL2Q53FV1 153 aa12.86□□□□□ -0.35
RABGAP1-201ENST00000317419 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.86□□□□□ -0.35
RABGAP1-201ENST00000317419 HIST1H2BHQ93079 126 aa12.86□□□□□ -0.35
RABGAP1-201ENST00000317419 HIST1H2BNQ99877 126 aa12.86□□□□□ -0.35
RABGAP1-201ENST00000317419 HIST1H2BMQ99879 126 aa12.86□□□□□ -0.35
RABGAP1-201ENST00000317419 CHCHD5Q9BSY4 110 aa12.86□□□□□ -0.35
RABGAP1-201ENST00000317419 LINC00614P0C842 121 aa12.86□□□□□ -0.35
RABGAP1-201ENST00000317419 RAB5BP61020 215 aa12.85□□□□□ -0.35
RABGAP1-201ENST00000317419 FA2HQ7L5A8 372 aa12.85□□□□□ -0.35
RABGAP1-201ENST00000317419 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.84□□□□□ -0.35
RABGAP1-201ENST00000317419 LCE6AA0A183 80 aa12.84□□□□□ -0.35
RABGAP1-201ENST00000317419 IGKV2-29A2NJV5 120 aaPredicted RBP12.84□□□□□ -0.35
RABGAP1-201ENST00000317419 LY6G6CO95867 125 aa12.84□□□□□ -0.35
RABGAP1-201ENST00000317419 MRPL52Q86TS9 123 aaKnown RBP12.84□□□□□ -0.35
RABGAP1-201ENST00000317419 SACSQ9NZJ4 4579 aa12.84□□□□□ -0.35
RABGAP1-201ENST00000317419 A0A1B0GUV1 79 aa12.84□□□□□ -0.35
RABGAP1-201ENST00000317419 GAGE6Q13070 117 aa12.84□□□□□ -0.35
RABGAP1-201ENST00000317419 C1orf196B1AJZ1 125 aa12.83□□□□□ -0.36
RABGAP1-201ENST00000317419 CHCHD1Q96BP2 118 aaKnown RBP12.83□□□□□ -0.36
RABGAP1-201ENST00000317419 AP5S1Q9NUS5 200 aa12.83□□□□□ -0.36
RABGAP1-201ENST00000317419 LINC00310P59036 64 aa12.83□□□□□ -0.36
RABGAP1-201ENST00000317419 Q8N3U1 123 aa12.83□□□□□ -0.36
RABGAP1-201ENST00000317419 K7EP13 123 aa12.82□□□□□ -0.36
RABGAP1-201ENST00000317419 MPV17L2Q567V2 206 aa12.82□□□□□ -0.36
RABGAP1-201ENST00000317419 TIMM21Q9BVV7 248 aa12.82□□□□□ -0.36
RABGAP1-201ENST00000317419 UBE2L6O14933 153 aa12.81□□□□□ -0.36
RABGAP1-201ENST00000317419 FGF6P10767 208 aa12.81□□□□□ -0.36
RABGAP1-201ENST00000317419 RBX1P62877 108 aa12.81□□□□□ -0.36
RABGAP1-201ENST00000317419 TMEM18Q96B42 140 aa12.81□□□□□ -0.36
RABGAP1-201ENST00000317419 CSDC2Q9Y534 153 aaKnown RBP12.81□□□□□ -0.36
RABGAP1-201ENST00000317419 ZNF25P17030 456 aaPredicted RBP12.81□□□□□ -0.36
RABGAP1-201ENST00000317419 BAGE3Q86Y29 109 aa12.81□□□□□ -0.36
RABGAP1-201ENST00000317419 UBE2D4Q9Y2X8 147 aa12.81□□□□□ -0.36
RABGAP1-201ENST00000317419 TMEM262E9PQX1 116 aa12.8□□□□□ -0.36
RABGAP1-201ENST00000317419 G0S2P27469 103 aa12.8□□□□□ -0.36
RABGAP1-201ENST00000317419 RPL39P62891 51 aaKnown RBP12.8□□□□□ -0.36
RABGAP1-201ENST00000317419 A0A096LNJ9 63 aa12.8□□□□□ -0.36
RABGAP1-201ENST00000317419 A0A087WX48 190 aa12.79□□□□□ -0.36
RABGAP1-201ENST00000317419 COA6Q5JTJ3 125 aaKnown RBP12.79□□□□□ -0.36
RABGAP1-201ENST00000317419 RNASEKQ6P5S7 137 aaKnown RBP12.79□□□□□ -0.36
RABGAP1-201ENST00000317419 C2orf66Q6UXQ4 117 aa12.79□□□□□ -0.36
RABGAP1-201ENST00000317419 TOMM6Q96B49 74 aa12.79□□□□□ -0.36
RABGAP1-201ENST00000317419 PYGO1Q9Y3Y4 419 aa12.79□□□□□ -0.36
RABGAP1-201ENST00000317419 NBDYA0A0U1RRE5 68 aa12.79□□□□□ -0.36
RABGAP1-201ENST00000317419 IGHV3-30P01768 117 aa12.79□□□□□ -0.36
RABGAP1-201ENST00000317419 IGHV3-33P01772 117 aa12.79□□□□□ -0.36
RABGAP1-201ENST00000317419 IGHV3-30-3P0DP02 117 aa12.79□□□□□ -0.36
RABGAP1-201ENST00000317419 IGHV3-30-5P0DP03 117 aa12.79□□□□□ -0.36
RABGAP1-201ENST00000317419 FAM104AQ969W3 186 aa12.79□□□□□ -0.36
RABGAP1-201ENST00000317419 KRTAP1-5Q9BYS1 174 aa12.79□□□□□ -0.36
RABGAP1-201ENST00000317419 CYSLTR1Q9Y271 337 aa12.79□□□□□ -0.36
RABGAP1-201ENST00000317419 IGLV4-60A0A075B6I1 120 aa12.78□□□□□ -0.36
RABGAP1-201ENST00000317419 SERF1AO75920 110 aa12.78□□□□□ -0.36
RABGAP1-201ENST00000317419 SMAGPQ0VAQ4 97 aa12.78□□□□□ -0.36
RABGAP1-201ENST00000317419 Q6ZR54 194 aa12.78□□□□□ -0.36
RABGAP1-201ENST00000317419 Q8N976 141 aa12.78□□□□□ -0.36
RABGAP1-201ENST00000317419 SPANXA1Q9NS26 97 aa12.78□□□□□ -0.36
RABGAP1-201ENST00000317419 LINC01549A6NIU2 74 aa12.77□□□□□ -0.36
RABGAP1-201ENST00000317419 NUPR1O60356 82 aa12.77□□□□□ -0.37
RABGAP1-201ENST00000317419 KMT2AQ03164 3969 aa12.77□□□□□ -0.37
RABGAP1-201ENST00000317419 TRAV9-2A0A087WT02 112 aa12.76□□□□□ -0.37
RABGAP1-201ENST00000317419 IGIPA6NJ69 53 aa12.76□□□□□ -0.37
RABGAP1-201ENST00000317419 IBA57-AS1B1ANH7 110 aa12.76□□□□□ -0.37
RABGAP1-201ENST00000317419 BTF3P20290 206 aaKnown RBP12.76□□□□□ -0.37
RABGAP1-201ENST00000317419 TTC32Q5I0X7 151 aa12.76□□□□□ -0.37
RABGAP1-201ENST00000317419 AMMECR1LQ6DCA0 310 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms