RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 LINC00862A6NCI5 91 aa5.41□□□□□ -1.54
CDC42-201ENST00000315554 HIGD1CA8MV81 97 aa5.41□□□□□ -1.54
CDC42-201ENST00000315554 RNF212Q495C1 297 aa5.41□□□□□ -1.54
CDC42-201ENST00000315554 LYPD5Q6UWN5 251 aa5.41□□□□□ -1.54
CDC42-201ENST00000315554 NEGR1Q7Z3B1 354 aa5.41□□□□□ -1.54
CDC42-201ENST00000315554 MTURNQ8N3F0 131 aa5.41□□□□□ -1.54
CDC42-201ENST00000315554 C14orf144Q96I85 54 aa5.41□□□□□ -1.54
CDC42-201ENST00000315554 KIF25-AS1Q9Y6Z4 181 aa5.41□□□□□ -1.54
CDC42-201ENST00000315554 HYDINQ4G0P3 5121 aa5.41□□□□□ -1.54
CDC42-201ENST00000315554 TRGC1P0CF51 173 aa5.4□□□□□ -1.54
CDC42-201ENST00000315554 LINC00315P59091 139 aa5.4□□□□□ -1.54
CDC42-201ENST00000315554 SNRPEP62304 92 aaKnown RBP5.4□□□□□ -1.54
CDC42-201ENST00000315554 SUMO4Q6EEV6 95 aa5.4□□□□□ -1.54
CDC42-201ENST00000315554 NUP35Q8NFH5 326 aa5.4□□□□□ -1.54
CDC42-201ENST00000315554 ZNRF2Q8NHG8 242 aa5.4□□□□□ -1.54
CDC42-201ENST00000315554 MRPS16Q9Y3D3 137 aaKnown RBP5.4□□□□□ -1.54
CDC42-201ENST00000315554 DNAH1Q9P2D7 4330 aa5.39□□□□□ -1.55
CDC42-201ENST00000315554 TRAV26-2A0A0B4J265 109 aa5.39□□□□□ -1.55
CDC42-201ENST00000315554 IGHV3-38A0A0C4DH36 116 aa5.39□□□□□ -1.55
CDC42-201ENST00000315554 B5MCH6 92 aa5.39□□□□□ -1.55
CDC42-201ENST00000315554 NEXN-AS1Q8NBZ9 246 aa5.39□□□□□ -1.55
CDC42-201ENST00000315554 ATP6V0E2Q8NHE4 81 aa5.39□□□□□ -1.55
CDC42-201ENST00000315554 BORCS7Q96B45 105 aa5.39□□□□□ -1.55
CDC42-201ENST00000315554 CNFNQ9BYD5 112 aa5.39□□□□□ -1.55
CDC42-201ENST00000315554 GFRA4Q9GZZ7 299 aa5.39□□□□□ -1.55
CDC42-201ENST00000315554 DPH3P1Q9H4G8 78 aa5.39□□□□□ -1.55
CDC42-201ENST00000315554 VPS13DQ5THJ4 4388 aa5.39□□□□□ -1.55
CDC42-201ENST00000315554 A0A1B0GUT8 65 aa5.39□□□□□ -1.55
CDC42-201ENST00000315554 SMIM27A0A1W2PRY6 76 aa5.39□□□□□ -1.55
CDC42-201ENST00000315554 LINC00694P0DN24 101 aa5.39□□□□□ -1.55
CDC42-201ENST00000315554 MRPL54Q6P161 138 aaKnown RBP5.39□□□□□ -1.55
CDC42-201ENST00000315554 WFDC10BQ8IUB3 73 aa5.39□□□□□ -1.55
CDC42-201ENST00000315554 DEFB104AQ8WTQ1 72 aa5.39□□□□□ -1.55
CDC42-201ENST00000315554 Q9H8V8 135 aa5.39□□□□□ -1.55
CDC42-201ENST00000315554 NAT8BQ9UHF3 227 aa5.39□□□□□ -1.55
CDC42-201ENST00000315554 FAM231BA6NCW3 169 aa5.38□□□□□ -1.55
CDC42-201ENST00000315554 TSTD3H0UI37 97 aa5.38□□□□□ -1.55
CDC42-201ENST00000315554 H3BS24 57 aa5.38□□□□□ -1.55
CDC42-201ENST00000315554 RPL36AP83881 106 aaKnown RBP5.38□□□□□ -1.55
CDC42-201ENST00000315554 PNRC1Q12796 327 aaPredicted RBP5.38□□□□□ -1.55
CDC42-201ENST00000315554 RPL36ALQ969Q0 106 aaKnown RBP5.38□□□□□ -1.55
CDC42-201ENST00000315554 KRTAP1-5Q9BYS1 174 aa5.38□□□□□ -1.55
CDC42-201ENST00000315554 GTSF1LQ9H1H1 148 aa5.38□□□□□ -1.55
CDC42-201ENST00000315554 V9GYY9 64 aa5.38□□□□□ -1.55
CDC42-201ENST00000315554 TRBV10-1A0A0K0K1A3 114 aa5.37□□□□□ -1.55
CDC42-201ENST00000315554 NBDYA0A0U1RRE5 68 aa5.37□□□□□ -1.55
CDC42-201ENST00000315554 M0QY20 66 aa5.37□□□□□ -1.55
CDC42-201ENST00000315554 GAS8-AS1O95177 125 aa5.37□□□□□ -1.55
CDC42-201ENST00000315554 MT-ND4LP03901 98 aa5.37□□□□□ -1.55
CDC42-201ENST00000315554 UBE2D3P61077 147 aa5.37□□□□□ -1.55
CDC42-201ENST00000315554 UBE2D2P62837 147 aa5.37□□□□□ -1.55
CDC42-201ENST00000315554 RIGQ13278 110 aa5.37□□□□□ -1.55
CDC42-201ENST00000315554 OR10J3Q5JRS4 329 aa5.37□□□□□ -1.55
CDC42-201ENST00000315554 LINC00336Q6ZUF6 198 aa5.37□□□□□ -1.55
CDC42-201ENST00000315554 SH2D6Q7Z4S9 175 aa5.37□□□□□ -1.55
CDC42-201ENST00000315554 GATD1Q8NB37 220 aa5.37□□□□□ -1.55
CDC42-201ENST00000315554 UPK3BQ9BT76 320 aa5.37□□□□□ -1.55
CDC42-201ENST00000315554 SEC11CQ9BY50 192 aa5.37□□□□□ -1.55
CDC42-201ENST00000315554 TRBV7-3A0A075B6L6 115 aa5.36□□□□□ -1.55
CDC42-201ENST00000315554 SMKR1H3BMG3 65 aa5.36□□□□□ -1.55
CDC42-201ENST00000315554 NCR2O95944 276 aa5.36□□□□□ -1.55
CDC42-201ENST00000315554 RPL32P62910 135 aaKnown RBP5.36□□□□□ -1.55
CDC42-201ENST00000315554 PDZD11Q5EBL8 140 aa5.36□□□□□ -1.55
CDC42-201ENST00000315554 RASL11AQ6T310 242 aa5.36□□□□□ -1.55
CDC42-201ENST00000315554 Q6ZR54 194 aa5.36□□□□□ -1.55
CDC42-201ENST00000315554 AMN1Q8IY45 258 aa5.36□□□□□ -1.55
CDC42-201ENST00000315554 RPL39LQ96EH5 51 aaKnown RBP5.36□□□□□ -1.55
CDC42-201ENST00000315554 TRAV8-6A0A0B4J262 113 aa5.35□□□□□ -1.55
CDC42-201ENST00000315554 H7C1H1 209 aa5.35□□□□□ -1.55
CDC42-201ENST00000315554 IGHV3-30P01768 117 aa5.35□□□□□ -1.55
CDC42-201ENST00000315554 IGHV3-33P01772 117 aa5.35□□□□□ -1.55
CDC42-201ENST00000315554 IGHV3-30-3P0DP02 117 aa5.35□□□□□ -1.55
CDC42-201ENST00000315554 IGHV3-30-5P0DP03 117 aa5.35□□□□□ -1.55
CDC42-201ENST00000315554 LELP1Q5T871 98 aa5.35□□□□□ -1.55
CDC42-201ENST00000315554 RNF185Q96GF1 192 aa5.35□□□□□ -1.55
CDC42-201ENST00000315554 TMEM191AQ9H0A3 160 aa5.35□□□□□ -1.55
CDC42-201ENST00000315554 TRIAP1O43715 76 aa5.34□□□□□ -1.55
CDC42-201ENST00000315554 HSBP1O75506 76 aa5.34□□□□□ -1.55
CDC42-201ENST00000315554 APOC3P02656 99 aa5.34□□□□□ -1.55
CDC42-201ENST00000315554 RPS10P46783 165 aaKnown RBP5.34□□□□□ -1.55
CDC42-201ENST00000315554 HBBP68871 147 aa5.34□□□□□ -1.55
CDC42-201ENST00000315554 C10orf91Q5T1B1 145 aa5.34□□□□□ -1.55
CDC42-201ENST00000315554 BAALCQ8WXS3 180 aa5.34□□□□□ -1.55
CDC42-201ENST00000315554 NIT2Q9NQR4 276 aa5.34□□□□□ -1.55
CDC42-201ENST00000315554 CARHSP1Q9Y2V2 147 aaKnown RBP5.34□□□□□ -1.55
CDC42-201ENST00000315554 KMT2AQ03164 3969 aa5.33□□□□□ -1.56
CDC42-201ENST00000315554 A0A1B0GXF2 115 aa5.33□□□□□ -1.56
CDC42-201ENST00000315554 C7orf77A4D0Y5 90 aa5.33□□□□□ -1.56
CDC42-201ENST00000315554 VCYO14598 125 aa5.33□□□□□ -1.56
CDC42-201ENST00000315554 RTL8CO15255 209 aa5.33□□□□□ -1.56
CDC42-201ENST00000315554 SUMO2P61956 95 aaKnown RBP5.33□□□□□ -1.56
CDC42-201ENST00000315554 MRPL51Q4U2R6 128 aaKnown RBP5.33□□□□□ -1.56
CDC42-201ENST00000315554 NTM-AS1Q6ZSK4 140 aa5.33□□□□□ -1.56
CDC42-201ENST00000315554 DNAJC30Q96LL9 226 aa5.33□□□□□ -1.56
CDC42-201ENST00000315554 RPS10P5Q9NQ39 176 aa5.33□□□□□ -1.56
CDC42-201ENST00000315554 DNAH10OSP0CZ25 163 aa5.32□□□□□ -1.56
CDC42-201ENST00000315554 TTC32Q5I0X7 151 aa5.32□□□□□ -1.56
CDC42-201ENST00000315554 C1orf134Q5TEV5 83 aa5.32□□□□□ -1.56
CDC42-201ENST00000315554 FAM104BQ5XKR9 115 aa5.32□□□□□ -1.56
CDC42-201ENST00000315554 A0A087WWC5 75 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms