RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 Q9HAA7 133 aa10.35□□□□□ -0.75
SPAST-201ENST00000315285 MIR7-3HGQ8N6C7 128 aa10.35□□□□□ -0.75
SPAST-201ENST00000315285 NFE4Q86UQ8 179 aa10.35□□□□□ -0.75
SPAST-201ENST00000315285 ARHGAP32A7KAX9 2087 aa10.35□□□□□ -0.75
SPAST-201ENST00000315285 A0A0J9YXY3 114 aa10.35□□□□□ -0.75
SPAST-201ENST00000315285 PRORYQ9H606 182 aa10.34□□□□□ -0.75
SPAST-201ENST00000315285 TCL1BO95988 128 aa10.34□□□□□ -0.75
SPAST-201ENST00000315285 MIAQ16674 131 aa10.34□□□□□ -0.75
SPAST-201ENST00000315285 DNAJC9-AS1A6NH13 148 aa10.34□□□□□ -0.75
SPAST-201ENST00000315285 ABCA2Q9BZC7 2435 aa10.34□□□□□ -0.75
SPAST-201ENST00000315285 IGHV3-30P01768 117 aa10.33□□□□□ -0.76
SPAST-201ENST00000315285 IGHV3-33P01772 117 aa10.33□□□□□ -0.76
SPAST-201ENST00000315285 IGHV3-30-5P0DP03 117 aa10.33□□□□□ -0.76
SPAST-201ENST00000315285 DEFB135Q30KP9 77 aa10.33□□□□□ -0.76
SPAST-201ENST00000315285 MAPKAPK5-AS1Q8N8E1 139 aa10.33□□□□□ -0.76
SPAST-201ENST00000315285 A0A0B4J2C4 111 aa10.33□□□□□ -0.76
SPAST-201ENST00000315285 LECT2O14960 151 aa10.33□□□□□ -0.76
SPAST-201ENST00000315285 Q6ZTI0 123 aa10.33□□□□□ -0.76
SPAST-201ENST00000315285 Q6YL49 198 aa10.33□□□□□ -0.76
SPAST-201ENST00000315285 IGHV4-4A0A075B6R2 117 aa10.32□□□□□ -0.76
SPAST-201ENST00000315285 LINC00310P59036 64 aa10.32□□□□□ -0.76
SPAST-201ENST00000315285 CLPSL1A2RUU4 121 aa10.32□□□□□ -0.76
SPAST-201ENST00000315285 DEFB4AO15263 64 aa10.32□□□□□ -0.76
SPAST-201ENST00000315285 ZNF22P17026 224 aaPredicted RBP10.31□□□□□ -0.76
SPAST-201ENST00000315285 M0QY20 66 aa10.31□□□□□ -0.76
SPAST-201ENST00000315285 C11orf21Q9P2W6 132 aa10.31□□□□□ -0.76
SPAST-201ENST00000315285 IGLV4-3A0A075B6K6 122 aa10.31□□□□□ -0.76
SPAST-201ENST00000315285 CXCL5P42830 114 aa10.31□□□□□ -0.76
SPAST-201ENST00000315285 PRO0255Q9UI72 69 aa10.31□□□□□ -0.76
SPAST-201ENST00000315285 DEFB114Q30KQ6 69 aa10.3□□□□□ -0.76
SPAST-201ENST00000315285 DEFB105AQ8NG35 78 aa10.3□□□□□ -0.76
SPAST-201ENST00000315285 LINC00467Q9BRT7 94 aa10.3□□□□□ -0.76
SPAST-201ENST00000315285 C10orf99Q6UWK7 81 aa10.3□□□□□ -0.76
SPAST-201ENST00000315285 CITED1Q99966 193 aa10.3□□□□□ -0.76
SPAST-201ENST00000315285 NRACQ8N912 160 aa10.3□□□□□ -0.76
SPAST-201ENST00000315285 CDKN2A-AS1Q9UH64 79 aa10.3□□□□□ -0.76
SPAST-201ENST00000315285 IGHV4-31P0DP07 118 aa10.3□□□□□ -0.76
SPAST-201ENST00000315285 IGKV3D-7A0A0C4DH55 119 aa10.29□□□□□ -0.76
SPAST-201ENST00000315285 FAM236AA0A1B0GUQ0 79 aa10.29□□□□□ -0.76
SPAST-201ENST00000315285 FAM236BA0A1B0GV22 79 aa10.29□□□□□ -0.76
SPAST-201ENST00000315285 SPAG11BQ08648 103 aa10.29□□□□□ -0.76
SPAST-201ENST00000315285 C2orf91Q6ZV80 131 aa10.29□□□□□ -0.76
SPAST-201ENST00000315285 TMEM223A0PJW6 202 aa10.29□□□□□ -0.76
SPAST-201ENST00000315285 SS18L2Q9UHA2 77 aa10.29□□□□□ -0.76
SPAST-201ENST00000315285 NDUFA1O15239 70 aa10.29□□□□□ -0.76
SPAST-201ENST00000315285 PRR9Q5T870 116 aa10.29□□□□□ -0.76
SPAST-201ENST00000315285 MRAPQ8TCY5 172 aa10.29□□□□□ -0.76
SPAST-201ENST00000315285 TRBV27A0A0K0K1C4 114 aa10.28□□□□□ -0.76
SPAST-201ENST00000315285 NCR3O14931 201 aa10.28□□□□□ -0.76
SPAST-201ENST00000315285 RPL18AQ02543 176 aaKnown RBP10.28□□□□□ -0.76
SPAST-201ENST00000315285 RNASE3P12724 160 aaKnown RBP10.28□□□□□ -0.76
SPAST-201ENST00000315285 hADV29S1A0JD25 119 aa10.28□□□□□ -0.76
SPAST-201ENST00000315285 ZMAT4Q9H898 229 aa10.28□□□□□ -0.76
SPAST-201ENST00000315285 SPANXB1Q9NS25 103 aaPredicted RBP10.28□□□□□ -0.76
SPAST-201ENST00000315285 KLK12Q9UKR0 248 aa10.28□□□□□ -0.76
SPAST-201ENST00000315285 ETDCA0A1B0GVM5 59 aa10.27□□□□□ -0.77
SPAST-201ENST00000315285 CPAMD8Q8IZJ3 1885 aa10.27□□□□□ -0.77
SPAST-201ENST00000315285 LRRC75A-AS1Q8N1F1 130 aa10.27□□□□□ -0.77
SPAST-201ENST00000315285 EML5Q05BV3 1969 aa10.27□□□□□ -0.77
SPAST-201ENST00000315285 JMJD7-PLA2G4BH0Y9G9 81 aa10.27□□□□□ -0.77
SPAST-201ENST00000315285 GAS8-AS1O95177 125 aa10.27□□□□□ -0.77
SPAST-201ENST00000315285 PSMB8P28062 276 aa10.26□□□□□ -0.77
SPAST-201ENST00000315285 CEP295Q9C0D2 2601 aa10.26□□□□□ -0.77
SPAST-201ENST00000315285 UBE2BP63146 152 aa10.26□□□□□ -0.77
SPAST-201ENST00000315285 TRBV6-5A0A0K0K1A5 114 aa10.26□□□□□ -0.77
SPAST-201ENST00000315285 INSL3P51460 131 aa10.26□□□□□ -0.77
SPAST-201ENST00000315285 CFAP126Q5VTH2 177 aa10.26□□□□□ -0.77
SPAST-201ENST00000315285 COL5A1P20908 1838 aaPredicted RBP10.25□□□□□ -0.77
SPAST-201ENST00000315285 ATOX1O00244 68 aa10.25□□□□□ -0.77
SPAST-201ENST00000315285 CNFNQ9BYD5 112 aa10.25□□□□□ -0.77
SPAST-201ENST00000315285 SPANXCQ9NY87 97 aa10.25□□□□□ -0.77
SPAST-201ENST00000315285 FUSP35637 526 aaKnown RBP eCLIP10.25□□□□□ -0.77
SPAST-201ENST00000315285 A0A1B0GX51 115 aa10.24□□□□□ -0.77
SPAST-201ENST00000315285 KLLNB2CW77 178 aa10.24□□□□□ -0.77
SPAST-201ENST00000315285 CDSNQ15517 529 aa10.24□□□□□ -0.77
SPAST-201ENST00000315285 HIST2H2BDQ6DRA6 164 aa10.24□□□□□ -0.77
SPAST-201ENST00000315285 PROK1P58294 105 aa10.24□□□□□ -0.77
SPAST-201ENST00000315285 MRPS12O15235 138 aaKnown RBP10.24□□□□□ -0.77
SPAST-201ENST00000315285 CCL18P55774 89 aa10.24□□□□□ -0.77
SPAST-201ENST00000315285 Q8N976 141 aa10.24□□□□□ -0.77
SPAST-201ENST00000315285 URB1-AS1Q96HZ7 61 aa10.24□□□□□ -0.77
SPAST-201ENST00000315285 WFDC11Q8NEX6 87 aa10.23□□□□□ -0.77
SPAST-201ENST00000315285 Q6ZS46 218 aa10.22□□□□□ -0.77
SPAST-201ENST00000315285 Q6ZSV7 163 aa10.22□□□□□ -0.77
SPAST-201ENST00000315285 H3BQ85 93 aa10.22□□□□□ -0.77
SPAST-201ENST00000315285 PYGO1Q9Y3Y4 419 aa10.22□□□□□ -0.77
SPAST-201ENST00000315285 TEX49A0A1B0GTD5 131 aa10.22□□□□□ -0.77
SPAST-201ENST00000315285 POLR2KP53803 58 aaKnown RBP10.22□□□□□ -0.77
SPAST-201ENST00000315285 DIRC1Q969H9 104 aa10.22□□□□□ -0.77
SPAST-201ENST00000315285 TSHBP01222 138 aa10.21□□□□□ -0.77
SPAST-201ENST00000315285 IGLV1-40P01703 118 aa10.21□□□□□ -0.77
SPAST-201ENST00000315285 TMEM256-PLSCR3K7ERE1 68 aa10.21□□□□□ -0.77
SPAST-201ENST00000315285 LINC00308Q8TCZ7 52 aa10.21□□□□□ -0.77
SPAST-201ENST00000315285 TRAV26-1A0A087WT03 109 aa10.21□□□□□ -0.78
SPAST-201ENST00000315285 TIRAPP58753 221 aa10.21□□□□□ -0.78
SPAST-201ENST00000315285 LINC00269Q8N2A0 174 aa10.21□□□□□ -0.78
SPAST-201ENST00000315285 PSMG3-AS1Q96PY0 264 aa10.21□□□□□ -0.78
SPAST-201ENST00000315285 C14orf132Q9NPU4 83 aa10.21□□□□□ -0.78
SPAST-201ENST00000315285 TRIAP1O43715 76 aa10.2□□□□□ -0.78
SPAST-201ENST00000315285 RBM3P98179 157 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms