RNA–Protein interactions for RNA: ENST00000310483.10

SLC39A1-201, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-201ENST00000310483 TRBV10-2A0A0K0K1G8 114 aa11.52□□□□□ -0.57
SLC39A1-201ENST00000310483 MRPS36P82909 103 aaKnown RBP11.52□□□□□ -0.57
SLC39A1-201ENST00000310483 Q6ZSN1 163 aa11.52□□□□□ -0.57
SLC39A1-201ENST00000310483 DAND5Q8N907 189 aa11.52□□□□□ -0.57
SLC39A1-201ENST00000310483 NDUFA12Q9UI09 145 aa11.52□□□□□ -0.57
SLC39A1-201ENST00000310483 ICOSQ9Y6W8 199 aa11.52□□□□□ -0.57
SLC39A1-201ENST00000310483 SNCGO76070 127 aa11.51□□□□□ -0.57
SLC39A1-201ENST00000310483 NACAE9PAV3 2078 aa11.51□□□□□ -0.57
SLC39A1-201ENST00000310483 IGHV4-59P01825 116 aa11.51□□□□□ -0.57
SLC39A1-201ENST00000310483 GAGE2BQ13066 116 aa11.51□□□□□ -0.57
SLC39A1-201ENST00000310483 GAGE2EQ4V326 116 aa11.51□□□□□ -0.57
SLC39A1-201ENST00000310483 C10orf105Q8TEF2 133 aa11.51□□□□□ -0.57
SLC39A1-201ENST00000310483 GAGE2DQ9UEU5 116 aa11.51□□□□□ -0.57
SLC39A1-201ENST00000310483 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.5□□□□□ -0.57
SLC39A1-201ENST00000310483 TRAV8-4A0A0B4J246 113 aa11.5□□□□□ -0.57
SLC39A1-201ENST00000310483 IGHV1-58A0A0C4DH39 117 aa11.5□□□□□ -0.57
SLC39A1-201ENST00000310483 IGKV2-29A2NJV5 120 aaPredicted RBP11.5□□□□□ -0.57
SLC39A1-201ENST00000310483 H7C423 109 aa11.5□□□□□ -0.57
SLC39A1-201ENST00000310483 B5MCH6 92 aa11.5□□□□□ -0.57
SLC39A1-201ENST00000310483 C2orf82Q6UX34 121 aa11.5□□□□□ -0.57
SLC39A1-201ENST00000310483 IGHV3-38A0A0C4DH36 116 aa11.49□□□□□ -0.57
SLC39A1-201ENST00000310483 H3BMM0 161 aa11.49□□□□□ -0.57
SLC39A1-201ENST00000310483 UCNP55089 124 aa11.49□□□□□ -0.57
SLC39A1-201ENST00000310483 UBE2WQ96B02 151 aa11.49□□□□□ -0.57
SLC39A1-201ENST00000310483 PYGO1Q9Y3Y4 419 aa11.49□□□□□ -0.57
SLC39A1-201ENST00000310483 RPL13AP40429 203 aaKnown RBP11.48□□□□□ -0.57
SLC39A1-201ENST00000310483 NDUFV3P56181 108 aaKnown RBP11.48□□□□□ -0.57
SLC39A1-201ENST00000310483 C15orf53Q8NAA6 179 aa11.48□□□□□ -0.57
SLC39A1-201ENST00000310483 VSIG2Q96IQ7 327 aa11.48□□□□□ -0.57
SLC39A1-201ENST00000310483 MXRA5Q9NR99 2828 aa11.48□□□□□ -0.57
SLC39A1-201ENST00000310483 TRGV11A0A075B6L2 103 aa11.48□□□□□ -0.57
SLC39A1-201ENST00000310483 MSMBP08118 114 aa11.48□□□□□ -0.57
SLC39A1-201ENST00000310483 GNLYP22749 145 aa11.48□□□□□ -0.57
SLC39A1-201ENST00000310483 MIAQ16674 131 aa11.48□□□□□ -0.57
SLC39A1-201ENST00000310483 CCL19Q99731 98 aa11.48□□□□□ -0.57
SLC39A1-201ENST00000310483 CHCHD7Q9BUK0 85 aa11.48□□□□□ -0.57
SLC39A1-201ENST00000310483 TNFRSF18Q9Y5U5 241 aa11.48□□□□□ -0.57
SLC39A1-201ENST00000310483 GAGE5Q13069 117 aa11.47□□□□□ -0.57
SLC39A1-201ENST00000310483 GAGE6Q13070 117 aa11.47□□□□□ -0.57
SLC39A1-201ENST00000310483 TTC32Q5I0X7 151 aa11.47□□□□□ -0.57
SLC39A1-201ENST00000310483 SPANXDQ9BXN6 97 aa11.47□□□□□ -0.57
SLC39A1-201ENST00000310483 SPANXCQ9NY87 97 aa11.47□□□□□ -0.57
SLC39A1-201ENST00000310483 FLNCQ14315 2725 aa11.47□□□□□ -0.57
SLC39A1-201ENST00000310483 CCDC179H3BU77 68 aa11.47□□□□□ -0.57
SLC39A1-201ENST00000310483 DUX3Q96PT4 197 aa11.46□□□□□ -0.57
SLC39A1-201ENST00000310483 UBE2D4Q9Y2X8 147 aa11.46□□□□□ -0.57
SLC39A1-201ENST00000310483 ATP5J2P56134 94 aa11.46□□□□□ -0.58
SLC39A1-201ENST00000310483 DEFB112Q30KQ8 113 aa11.46□□□□□ -0.58
SLC39A1-201ENST00000310483 LINC00467Q9BRT7 94 aa11.46□□□□□ -0.58
SLC39A1-201ENST00000310483 TINCRA0A1B0GVN0 87 aa11.45□□□□□ -0.58
SLC39A1-201ENST00000310483 RBMY1BA6NDE4 496 aaKnown RBP11.45□□□□□ -0.58
SLC39A1-201ENST00000310483 RBMY1EA6NEQ0 496 aaKnown RBP11.45□□□□□ -0.58
SLC39A1-201ENST00000310483 RBMY1DP0C7P1 496 aaKnown RBP11.45□□□□□ -0.58
SLC39A1-201ENST00000310483 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.45□□□□□ -0.58
SLC39A1-201ENST00000310483 TMEM61Q8N0U2 210 aa11.44□□□□□ -0.58
SLC39A1-201ENST00000310483 LINC01600Q96MT4 127 aa11.44□□□□□ -0.58
SLC39A1-201ENST00000310483 CDKN2A-AS1Q9UH64 79 aa11.44□□□□□ -0.58
SLC39A1-201ENST00000310483 A0A0U1RRA0 63 aa11.44□□□□□ -0.58
SLC39A1-201ENST00000310483 IFITM1P13164 125 aa11.44□□□□□ -0.58
SLC39A1-201ENST00000310483 HOXD3P31249 432 aaPredicted RBP11.44□□□□□ -0.58
SLC39A1-201ENST00000310483 DEFB131AP59861 70 aa11.44□□□□□ -0.58
SLC39A1-201ENST00000310483 CFAP46Q8IYW2 2715 aa11.43□□□□□ -0.58
SLC39A1-201ENST00000310483 USP9YO00507 2555 aaPredicted RBP11.43□□□□□ -0.58
SLC39A1-201ENST00000310483 DEFB136Q30KP8 78 aa11.43□□□□□ -0.58
SLC39A1-201ENST00000310483 C18orf65Q6ZTR6 163 aa11.43□□□□□ -0.58
SLC39A1-201ENST00000310483 ZNF625Q96I27 306 aaPredicted RBP11.43□□□□□ -0.58
SLC39A1-201ENST00000310483 LST1O00453 97 aa11.42□□□□□ -0.58
SLC39A1-201ENST00000310483 COX6CP09669 75 aa11.42□□□□□ -0.58
SLC39A1-201ENST00000310483 NRGNQ92686 78 aa11.42□□□□□ -0.58
SLC39A1-201ENST00000310483 AKAP9Q99996 3911 aa11.42□□□□□ -0.58
SLC39A1-201ENST00000310483 COX6A2Q02221 97 aa11.41□□□□□ -0.58
SLC39A1-201ENST00000310483 HIST2H2BDQ6DRA6 164 aa11.41□□□□□ -0.58
SLC39A1-201ENST00000310483 EDA2RQ9HAV5 297 aa11.41□□□□□ -0.58
SLC39A1-201ENST00000310483 CITED2Q99967 270 aaPredicted RBP11.4□□□□□ -0.58
SLC39A1-201ENST00000310483 SLURP1P55000 103 aa11.4□□□□□ -0.58
SLC39A1-201ENST00000310483 MAPK1IP1LQ8NDC0 245 aa11.4□□□□□ -0.58
SLC39A1-201ENST00000310483 TMEM101Q96IK0 257 aa11.4□□□□□ -0.58
SLC39A1-201ENST00000310483 H3BT86 120 aa11.39□□□□□ -0.59
SLC39A1-201ENST00000310483 SPANXA1Q9NS26 97 aa11.39□□□□□ -0.59
SLC39A1-201ENST00000310483 GAGE12JA6NER3 117 aa11.39□□□□□ -0.59
SLC39A1-201ENST00000310483 GAGE7O76087 117 aa11.39□□□□□ -0.59
SLC39A1-201ENST00000310483 NDUFA7O95182 113 aa11.39□□□□□ -0.59
SLC39A1-201ENST00000310483 GAGE12FP0CL80 117 aa11.39□□□□□ -0.59
SLC39A1-201ENST00000310483 GAGE12GP0CL81 117 aa11.39□□□□□ -0.59
SLC39A1-201ENST00000310483 GAGE12IP0CL82 117 aa11.39□□□□□ -0.59
SLC39A1-201ENST00000310483 GAGE4Q13068 117 aa11.39□□□□□ -0.59
SLC39A1-201ENST00000310483 RNF152Q8N8N0 203 aa11.39□□□□□ -0.59
SLC39A1-201ENST00000310483 POLQO75417 2590 aa11.39□□□□□ -0.59
SLC39A1-201ENST00000310483 CENPEQ02224 2701 aa11.39□□□□□ -0.59
SLC39A1-201ENST00000310483 Q6Q795 121 aa11.38□□□□□ -0.59
SLC39A1-201ENST00000310483 B4DSR2 109 aa11.37□□□□□ -0.59
SLC39A1-201ENST00000310483 YAE1D1Q9NRH1 226 aa11.37□□□□□ -0.59
SLC39A1-201ENST00000310483 USP9XQ93008 2570 aaPredicted RBP11.37□□□□□ -0.59
SLC39A1-201ENST00000310483 Q9H8V8 135 aa11.36□□□□□ -0.59
SLC39A1-201ENST00000310483 IGHV3OR16-12A0A075B7B8 117 aa11.36□□□□□ -0.59
SLC39A1-201ENST00000310483 NDUFA1O15239 70 aa11.36□□□□□ -0.59
SLC39A1-201ENST00000310483 ZNF415Q09FC8 603 aa11.36□□□□□ -0.59
SLC39A1-201ENST00000310483 Q8N2B8 174 aa11.36□□□□□ -0.59
SLC39A1-201ENST00000310483 LINC01587Q99440 93 aa11.36□□□□□ -0.59
SLC39A1-201ENST00000310483 LINC00308Q8TCZ7 52 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms