RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 WISP1O95388 367 aa11.88□□□□□ -0.51
HCFC1-201ENST00000310441 ARTNQ5T4W7 220 aa11.87□□□□□ -0.51
HCFC1-201ENST00000310441 SLX1AQ9BQ83 275 aa11.87□□□□□ -0.51
HCFC1-201ENST00000310441 ZFAND2AQ8N6M9 145 aa11.87□□□□□ -0.51
HCFC1-201ENST00000310441 C20orf203Q8NBC4 194 aa11.87□□□□□ -0.51
HCFC1-201ENST00000310441 FN1P02751 2386 aaKnown RBP11.87□□□□□ -0.51
HCFC1-201ENST00000310441 IBA57-AS1B1ANH7 110 aa11.87□□□□□ -0.51
HCFC1-201ENST00000310441 WFDC11Q8NEX6 87 aa11.87□□□□□ -0.51
HCFC1-201ENST00000310441 ASPHD1Q5U4P2 390 aa11.87□□□□□ -0.51
HCFC1-201ENST00000310441 P0DMU3 169 aa11.87□□□□□ -0.51
HCFC1-201ENST00000310441 FAM231AP0DMU4 169 aa11.87□□□□□ -0.51
HCFC1-201ENST00000310441 FAM231CP0DMU5 169 aa11.87□□□□□ -0.51
HCFC1-201ENST00000310441 RNF138Q8WVD3 245 aa11.87□□□□□ -0.51
HCFC1-201ENST00000310441 A6NED7 52 aa11.86□□□□□ -0.51
HCFC1-201ENST00000310441 KRTAP27-1Q3LI81 207 aa11.86□□□□□ -0.51
HCFC1-201ENST00000310441 MRPS36P82909 103 aaKnown RBP11.86□□□□□ -0.51
HCFC1-201ENST00000310441 SPRY2O43597 315 aa11.85□□□□□ -0.51
HCFC1-201ENST00000310441 DEFB135Q30KP9 77 aa11.85□□□□□ -0.51
HCFC1-201ENST00000310441 FAM19A3Q7Z5A8 133 aa11.85□□□□□ -0.51
HCFC1-201ENST00000310441 TEX49A0A1B0GTD5 131 aa11.85□□□□□ -0.51
HCFC1-201ENST00000310441 ZNF503-AS2A6NEH8 195 aa11.84□□□□□ -0.51
HCFC1-201ENST00000310441 RSPO1Q2MKA7 263 aaPredicted RBP11.84□□□□□ -0.51
HCFC1-201ENST00000310441 PIK3CD-AS1Q5SR53 167 aa11.84□□□□□ -0.51
HCFC1-201ENST00000310441 C1orf195Q5TG92 126 aa11.84□□□□□ -0.51
HCFC1-201ENST00000310441 C11orf53Q8IXP5 236 aa11.84□□□□□ -0.51
HCFC1-201ENST00000310441 F8P00451 2351 aa11.83□□□□□ -0.51
HCFC1-201ENST00000310441 BLCAPP62952 87 aa11.83□□□□□ -0.52
HCFC1-201ENST00000310441 PLA2G2CQ5R387 149 aa11.83□□□□□ -0.52
HCFC1-201ENST00000310441 NFE4Q86UQ8 179 aa11.83□□□□□ -0.52
HCFC1-201ENST00000310441 C7orf33Q8WU49 177 aa11.83□□□□□ -0.52
HCFC1-201ENST00000310441 DHRS4-AS1Q9P1J3 65 aa11.83□□□□□ -0.52
HCFC1-201ENST00000310441 CTSZQ9UBR2 303 aa11.83□□□□□ -0.52
HCFC1-201ENST00000310441 SDIM1Q6ZPB5 146 aa11.83□□□□□ -0.52
HCFC1-201ENST00000310441 C20orf197Q8N268 126 aa11.83□□□□□ -0.52
HCFC1-201ENST00000310441 REG3AQ06141 175 aa11.83□□□□□ -0.52
HCFC1-201ENST00000310441 MUC7Q8TAX7 377 aa11.83□□□□□ -0.52
HCFC1-201ENST00000310441 Q8N9W7 124 aa11.83□□□□□ -0.52
HCFC1-201ENST00000310441 A0A0J9YX75 114 aa11.82□□□□□ -0.52
HCFC1-201ENST00000310441 C11orf45Q8TAV5 145 aa11.82□□□□□ -0.52
HCFC1-201ENST00000310441 TDRG1Q3Y452 100 aa11.82□□□□□ -0.52
HCFC1-201ENST00000310441 NDUFA7O95182 113 aa11.82□□□□□ -0.52
HCFC1-201ENST00000310441 RNASE8Q8TDE3 154 aaKnown RBP11.82□□□□□ -0.52
HCFC1-201ENST00000310441 IGHV4-38-2P0DP08 117 aa11.81□□□□□ -0.52
HCFC1-201ENST00000310441 COX17Q14061 63 aa11.81□□□□□ -0.52
HCFC1-201ENST00000310441 IGLC6P0CF74 106 aa11.81□□□□□ -0.52
HCFC1-201ENST00000310441 TIMM17BO60830 172 aa11.81□□□□□ -0.52
HCFC1-201ENST00000310441 SERP2Q8N6R1 65 aa11.81□□□□□ -0.52
HCFC1-201ENST00000310441 LY6G6EA0A0G2JKS1 128 aa11.8□□□□□ -0.52
HCFC1-201ENST00000310441 U3KQA8 63 aa11.8□□□□□ -0.52
HCFC1-201ENST00000310441 CRYGDP07320 174 aa11.8□□□□□ -0.52
HCFC1-201ENST00000310441 MSRB1Q9NZV6 116 aa11.8□□□□□ -0.52
HCFC1-201ENST00000310441 PIP4P1Q86T03 277 aa11.79□□□□□ -0.52
HCFC1-201ENST00000310441 ENHOQ6UWT2 76 aa11.79□□□□□ -0.52
HCFC1-201ENST00000310441 LINC00173Q6ZV60 143 aa11.79□□□□□ -0.52
HCFC1-201ENST00000310441 C19orf71A6NCJ1 209 aa11.79□□□□□ -0.52
HCFC1-201ENST00000310441 COL4A6Q14031 1691 aa11.79□□□□□ -0.52
HCFC1-201ENST00000310441 LOXL1Q08397 574 aaPredicted RBP11.79□□□□□ -0.52
HCFC1-201ENST00000310441 WFDC10BQ8IUB3 73 aa11.79□□□□□ -0.52
HCFC1-201ENST00000310441 TRBV30A0A0K0K1B3 111 aa11.79□□□□□ -0.52
HCFC1-201ENST00000310441 ACANP16112 2415 aa11.78□□□□□ -0.52
HCFC1-201ENST00000310441 HILS1P60008 231 aa11.78□□□□□ -0.52
HCFC1-201ENST00000310441 LINC00269Q8N2A0 174 aa11.78□□□□□ -0.52
HCFC1-201ENST00000310441 PIEZO2Q9H5I5 2752 aa11.78□□□□□ -0.52
HCFC1-201ENST00000310441 Q8N9L7 120 aa11.78□□□□□ -0.52
HCFC1-201ENST00000310441 RETNQ9HD89 108 aa11.78□□□□□ -0.52
HCFC1-201ENST00000310441 PTH2Q96A98 100 aa11.77□□□□□ -0.52
HCFC1-201ENST00000310441 HIGD2AQ9BW72 106 aa11.77□□□□□ -0.52
HCFC1-201ENST00000310441 VPREB1P12018 145 aa11.77□□□□□ -0.52
HCFC1-201ENST00000310441 FAM222AQ5U5X8 452 aa11.77□□□□□ -0.52
HCFC1-201ENST00000310441 IGHV4-61A0A0C4DH41 118 aa11.77□□□□□ -0.53
HCFC1-201ENST00000310441 IGFL2Q6UWQ7 119 aa11.77□□□□□ -0.53
HCFC1-201ENST00000310441 A0A087WZ39 114 aa11.76□□□□□ -0.53
HCFC1-201ENST00000310441 DAZAP2Q15038 168 aaPredicted RBP11.76□□□□□ -0.53
HCFC1-201ENST00000310441 Q6ZSR3 168 aa11.76□□□□□ -0.53
HCFC1-201ENST00000310441 LINC00474Q9P2X8 69 aa11.76□□□□□ -0.53
HCFC1-201ENST00000310441 LINC01548A6NM66 108 aa11.76□□□□□ -0.53
HCFC1-201ENST00000310441 CDPF1Q6NVV7 123 aa11.76□□□□□ -0.53
HCFC1-201ENST00000310441 NAV2Q8IVL1 2488 aa11.76□□□□□ -0.53
HCFC1-201ENST00000310441 IGHV4-30-2A0A087WSY4 118 aa11.75□□□□□ -0.53
HCFC1-201ENST00000310441 CCKP06307 115 aa11.75□□□□□ -0.53
HCFC1-201ENST00000310441 A0A1B0GXF2 115 aa11.75□□□□□ -0.53
HCFC1-201ENST00000310441 NEXN-AS1Q8NBZ9 246 aa11.75□□□□□ -0.53
HCFC1-201ENST00000310441 PATE2Q6UY27 113 aa11.75□□□□□ -0.53
HCFC1-201ENST00000310441 CHCHD10Q8WYQ3 142 aaPredicted RBP11.75□□□□□ -0.53
HCFC1-201ENST00000310441 MAP6D1Q9H9H5 199 aa11.75□□□□□ -0.53
HCFC1-201ENST00000310441 RITA1Q96K30 269 aa11.74□□□□□ -0.53
HCFC1-201ENST00000310441 C9orf85Q96MD7 179 aa11.74□□□□□ -0.53
HCFC1-201ENST00000310441 PIEZO1Q92508 2521 aa11.73□□□□□ -0.53
HCFC1-201ENST00000310441 FAM19A1Q7Z5A9 133 aa11.73□□□□□ -0.53
HCFC1-201ENST00000310441 TMEM223A0PJW6 202 aa11.73□□□□□ -0.53
HCFC1-201ENST00000310441 UBE2D1P51668 147 aa11.72□□□□□ -0.53
HCFC1-201ENST00000310441 IGKV2-24A0A0C4DH68 120 aa11.72□□□□□ -0.53
HCFC1-201ENST00000310441 LINC00308Q8TCZ7 52 aa11.72□□□□□ -0.53
HCFC1-201ENST00000310441 SETD2Q9BYW2 2564 aaPredicted RBP11.72□□□□□ -0.53
HCFC1-201ENST00000310441 ABCA12Q86UK0 2595 aa11.72□□□□□ -0.53
HCFC1-201ENST00000310441 WT1P19544 449 aaPredicted RBP11.72□□□□□ -0.53
HCFC1-201ENST00000310441 NUPR1O60356 82 aa11.72□□□□□ -0.53
HCFC1-201ENST00000310441 MT-ATP8P03928 68 aa11.72□□□□□ -0.53
HCFC1-201ENST00000310441 MIFP14174 115 aa11.71□□□□□ -0.53
HCFC1-201ENST00000310441 IGLV1-47P01700 117 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms