RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 C1orf43Q9BWL3 253 aa13.32□□□□□ -0.28
VEGFB-201ENST00000309422 CKS2P33552 79 aa13.32□□□□□ -0.28
VEGFB-201ENST00000309422 FAM104BQ5XKR9 115 aa13.32□□□□□ -0.28
VEGFB-201ENST00000309422 AMMECR1LQ6DCA0 310 aa13.32□□□□□ -0.28
VEGFB-201ENST00000309422 LINC00862A6NCI5 91 aa13.31□□□□□ -0.28
VEGFB-201ENST00000309422 ATRAIDQ6UW56 229 aa13.31□□□□□ -0.28
VEGFB-201ENST00000309422 RNF185Q96GF1 192 aa13.31□□□□□ -0.28
VEGFB-201ENST00000309422 BTF3L4Q96K17 158 aa13.31□□□□□ -0.28
VEGFB-201ENST00000309422 CTDSP1Q9GZU7 261 aa13.31□□□□□ -0.28
VEGFB-201ENST00000309422 A0A087WTM6 91 aa13.3□□□□□ -0.28
VEGFB-201ENST00000309422 S100PP25815 95 aa13.3□□□□□ -0.28
VEGFB-201ENST00000309422 FCER1GP30273 86 aa13.3□□□□□ -0.28
VEGFB-201ENST00000309422 RBX1P62877 108 aa13.3□□□□□ -0.28
VEGFB-201ENST00000309422 NDUFA5Q16718 116 aa13.3□□□□□ -0.28
VEGFB-201ENST00000309422 KIR2DL4Q99706 377 aa13.3□□□□□ -0.28
VEGFB-201ENST00000309422 BIRC6Q9NR09 4857 aa13.29□□□□□ -0.28
VEGFB-201ENST00000309422 SMAGPQ0VAQ4 97 aa13.29□□□□□ -0.28
VEGFB-201ENST00000309422 MIAQ16674 131 aa13.29□□□□□ -0.28
VEGFB-201ENST00000309422 Q8N976 141 aa13.29□□□□□ -0.28
VEGFB-201ENST00000309422 TMEM70Q9BUB7 260 aa13.29□□□□□ -0.28
VEGFB-201ENST00000309422 VCYO14598 125 aa13.28□□□□□ -0.28
VEGFB-201ENST00000309422 PPBPP02775 128 aa13.28□□□□□ -0.28
VEGFB-201ENST00000309422 ADCYAP1P18509 176 aa13.28□□□□□ -0.28
VEGFB-201ENST00000309422 SUMO2P61956 95 aaKnown RBP13.28□□□□□ -0.28
VEGFB-201ENST00000309422 MRPL51Q4U2R6 128 aaKnown RBP13.28□□□□□ -0.28
VEGFB-201ENST00000309422 CDPF1Q6NVV7 123 aa13.28□□□□□ -0.28
VEGFB-201ENST00000309422 DEFB104AQ8WTQ1 72 aa13.28□□□□□ -0.28
VEGFB-201ENST00000309422 IMMP2LQ96T52 175 aa13.28□□□□□ -0.28
VEGFB-201ENST00000309422 A0A1B0GXF2 115 aa13.27□□□□□ -0.29
VEGFB-201ENST00000309422 SMKR1H3BMG3 65 aa13.27□□□□□ -0.29
VEGFB-201ENST00000309422 H7C423 109 aa13.27□□□□□ -0.29
VEGFB-201ENST00000309422 TCAPO15273 167 aa13.27□□□□□ -0.29
VEGFB-201ENST00000309422 PGPEP1Q9NXJ5 209 aa13.27□□□□□ -0.29
VEGFB-201ENST00000309422 RNASEKQ6P5S7 137 aaKnown RBP13.26□□□□□ -0.29
VEGFB-201ENST00000309422 TMEM101Q96IK0 257 aa13.26□□□□□ -0.29
VEGFB-201ENST00000309422 TMEM242Q9NWH2 141 aa13.26□□□□□ -0.29
VEGFB-201ENST00000309422 A0A1B0GUV1 79 aa13.25□□□□□ -0.29
VEGFB-201ENST00000309422 RPS10P46783 165 aaKnown RBP13.25□□□□□ -0.29
VEGFB-201ENST00000309422 CLPSL2Q6UWE3 100 aa13.25□□□□□ -0.29
VEGFB-201ENST00000309422 ORMDL3Q8N138 153 aa13.25□□□□□ -0.29
VEGFB-201ENST00000309422 LINC00269Q8N2A0 174 aa13.25□□□□□ -0.29
VEGFB-201ENST00000309422 C20orf78Q9BR46 151 aa13.25□□□□□ -0.29
VEGFB-201ENST00000309422 TRBV27A0A0K0K1C4 114 aa13.24□□□□□ -0.29
VEGFB-201ENST00000309422 C7orf77A4D0Y5 90 aa13.24□□□□□ -0.29
VEGFB-201ENST00000309422 D6R8Y8 96 aa13.24□□□□□ -0.29
VEGFB-201ENST00000309422 ZNF25P17030 456 aaPredicted RBP13.23□□□□□ -0.29
VEGFB-201ENST00000309422 REG3AQ06141 175 aa13.23□□□□□ -0.29
VEGFB-201ENST00000309422 RHEBQ15382 184 aa13.23□□□□□ -0.29
VEGFB-201ENST00000309422 NTN5Q8WTR8 489 aaPredicted RBP13.23□□□□□ -0.29
VEGFB-201ENST00000309422 TMEM18Q96B42 140 aa13.23□□□□□ -0.29
VEGFB-201ENST00000309422 PKD1P98161 4303 aa13.23□□□□□ -0.29
VEGFB-201ENST00000309422 DNAH11Q96DT5 4516 aa13.22□□□□□ -0.29
VEGFB-201ENST00000309422 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.22□□□□□ -0.29
VEGFB-201ENST00000309422 TRAV9-1A0A075B6T8 112 aa13.22□□□□□ -0.29
VEGFB-201ENST00000309422 IGKV2-29A2NJV5 120 aaPredicted RBP13.22□□□□□ -0.29
VEGFB-201ENST00000309422 PHOX2AO14813 284 aa13.22□□□□□ -0.29
VEGFB-201ENST00000309422 HLA-DQA1P01909 254 aa13.22□□□□□ -0.29
VEGFB-201ENST00000309422 NRACQ8N912 160 aa13.22□□□□□ -0.29
VEGFB-201ENST00000309422 TRAV8-4A0A0B4J246 113 aa13.21□□□□□ -0.29
VEGFB-201ENST00000309422 GAS8-AS1O95177 125 aa13.21□□□□□ -0.29
VEGFB-201ENST00000309422 TNFRSF6BO95407 300 aa13.21□□□□□ -0.29
VEGFB-201ENST00000309422 POLR2KP53803 58 aaKnown RBP13.21□□□□□ -0.29
VEGFB-201ENST00000309422 C14orf177Q52M58 125 aa13.21□□□□□ -0.29
VEGFB-201ENST00000309422 IGLV5-52A0A0A0MRZ9 124 aa13.2□□□□□ -0.3
VEGFB-201ENST00000309422 TSHBP01222 138 aa13.2□□□□□ -0.3
VEGFB-201ENST00000309422 FGF6P10767 208 aa13.2□□□□□ -0.3
VEGFB-201ENST00000309422 DGAT2L7PQ6IED9 249 aa13.2□□□□□ -0.3
VEGFB-201ENST00000309422 ENHOQ6UWT2 76 aa13.2□□□□□ -0.3
VEGFB-201ENST00000309422 TMEM136Q6ZRR5 245 aa13.2□□□□□ -0.3
VEGFB-201ENST00000309422 Q8N814 137 aa13.2□□□□□ -0.3
VEGFB-201ENST00000309422 OR5A1Q8NGJ0 315 aa13.2□□□□□ -0.3
VEGFB-201ENST00000309422 PRR34Q9NV39 138 aa13.2□□□□□ -0.3
VEGFB-201ENST00000309422 LAMTOR2Q9Y2Q5 125 aa13.2□□□□□ -0.3
VEGFB-201ENST00000309422 CARHSP1Q9Y2V2 147 aaKnown RBP13.2□□□□□ -0.3
VEGFB-201ENST00000309422 PKHD1P08F94 4074 aa13.2□□□□□ -0.3
VEGFB-201ENST00000309422 TRBV24-1A0A075B6N3 115 aa13.2□□□□□ -0.3
VEGFB-201ENST00000309422 KRTAP10-2P60368 255 aa13.2□□□□□ -0.3
VEGFB-201ENST00000309422 PRELID3AQ96N28 172 aa13.2□□□□□ -0.3
VEGFB-201ENST00000309422 RPS10P5Q9NQ39 176 aa13.2□□□□□ -0.3
VEGFB-201ENST00000309422 C20orf203Q8NBC4 194 aa13.19□□□□□ -0.3
VEGFB-201ENST00000309422 IGLV4-60A0A075B6I1 120 aa13.18□□□□□ -0.3
VEGFB-201ENST00000309422 IGKV3OR2-268A0A0C4DH90 116 aa13.18□□□□□ -0.3
VEGFB-201ENST00000309422 LRCOL1A6NCL2 159 aa13.18□□□□□ -0.3
VEGFB-201ENST00000309422 RAB5AP20339 215 aa13.18□□□□□ -0.3
VEGFB-201ENST00000309422 RPL32P62910 135 aaKnown RBP13.18□□□□□ -0.3
VEGFB-201ENST00000309422 SVBPQ8N300 66 aa13.18□□□□□ -0.3
VEGFB-201ENST00000309422 BAALCQ8WXS3 180 aa13.18□□□□□ -0.3
VEGFB-201ENST00000309422 SMIM2Q9BVW6 85 aa13.18□□□□□ -0.3
VEGFB-201ENST00000309422 MAP1LC3AQ9H492 121 aa13.18□□□□□ -0.3
VEGFB-201ENST00000309422 DYNC1H1Q14204 4646 aaKnown RBP13.17□□□□□ -0.3
VEGFB-201ENST00000309422 LECT2O14960 151 aa13.17□□□□□ -0.3
VEGFB-201ENST00000309422 SNAPINO95295 136 aa13.17□□□□□ -0.3
VEGFB-201ENST00000309422 APOC3P02656 99 aa13.17□□□□□ -0.3
VEGFB-201ENST00000309422 C10orf91Q5T1B1 145 aa13.17□□□□□ -0.3
VEGFB-201ENST00000309422 CLRN3Q8NCR9 226 aa13.17□□□□□ -0.3
VEGFB-201ENST00000309422 IGLV10-54A0A075B6I4 117 aa13.16□□□□□ -0.3
VEGFB-201ENST00000309422 NPYP01303 97 aa13.16□□□□□ -0.3
VEGFB-201ENST00000309422 ESDP10768 282 aa13.16□□□□□ -0.3
VEGFB-201ENST00000309422 COX19Q49B96 90 aa13.16□□□□□ -0.3
VEGFB-201ENST00000309422 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms