RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 C10orf99Q6UWK7 81 aa10.7□□□□□ -0.7
SCUBE2-201ENST00000309263 C15orf53Q8NAA6 179 aa10.7□□□□□ -0.7
SCUBE2-201ENST00000309263 KIF25-AS1Q9Y6Z4 181 aa10.7□□□□□ -0.7
SCUBE2-201ENST00000309263 ITPR3Q14573 2671 aa10.7□□□□□ -0.7
SCUBE2-201ENST00000309263 RHODO00212 210 aa10.7□□□□□ -0.7
SCUBE2-201ENST00000309263 ZNF22P17026 224 aaPredicted RBP10.7□□□□□ -0.7
SCUBE2-201ENST00000309263 SOCS3O14543 225 aa10.7□□□□□ -0.7
SCUBE2-201ENST00000309263 GAGE5Q13069 117 aa10.69□□□□□ -0.7
SCUBE2-201ENST00000309263 GAGE6Q13070 117 aa10.69□□□□□ -0.7
SCUBE2-201ENST00000309263 TRIAP1O43715 76 aa10.69□□□□□ -0.7
SCUBE2-201ENST00000309263 LEPROTO15243 131 aa10.69□□□□□ -0.7
SCUBE2-201ENST00000309263 IGHV3-30-3P0DP02 117 aa10.69□□□□□ -0.7
SCUBE2-201ENST00000309263 EIF4EBP3O60516 100 aaPredicted RBP10.68□□□□□ -0.7
SCUBE2-201ENST00000309263 IGHV4OR15-8A0A075B7B6 117 aa10.68□□□□□ -0.7
SCUBE2-201ENST00000309263 A0A087WW49 117 aa10.68□□□□□ -0.7
SCUBE2-201ENST00000309263 TMEM223A0PJW6 202 aa10.68□□□□□ -0.7
SCUBE2-201ENST00000309263 TMEM263Q8WUH6 116 aaKnown RBP10.68□□□□□ -0.7
SCUBE2-201ENST00000309263 A0A0J9YXY3 114 aa10.68□□□□□ -0.7
SCUBE2-201ENST00000309263 M0QY20 66 aa10.68□□□□□ -0.7
SCUBE2-201ENST00000309263 COX6CP09669 75 aa10.68□□□□□ -0.7
SCUBE2-201ENST00000309263 SNRPD3P62318 126 aaKnown RBP10.68□□□□□ -0.7
SCUBE2-201ENST00000309263 ZNF843Q8N446 348 aa10.68□□□□□ -0.7
SCUBE2-201ENST00000309263 NDUFA12Q9UI09 145 aa10.68□□□□□ -0.7
SCUBE2-201ENST00000309263 TEP1Q99973 2627 aaKnown RBP10.67□□□□□ -0.7
SCUBE2-201ENST00000309263 IGHV3-16A0A0C4DH30 117 aa10.67□□□□□ -0.7
SCUBE2-201ENST00000309263 A0A1W2PRX2 142 aa10.67□□□□□ -0.7
SCUBE2-201ENST00000309263 H3BMM0 161 aa10.67□□□□□ -0.7
SCUBE2-201ENST00000309263 CCDC179H3BU77 68 aa10.67□□□□□ -0.7
SCUBE2-201ENST00000309263 C19orf84I3L1E1 186 aa10.67□□□□□ -0.7
SCUBE2-201ENST00000309263 IGHV1-69P01742 117 aa10.67□□□□□ -0.7
SCUBE2-201ENST00000309263 UBE2WQ96B02 151 aa10.67□□□□□ -0.7
SCUBE2-201ENST00000309263 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.67□□□□□ -0.7
SCUBE2-201ENST00000309263 TRBV27A0A0K0K1C4 114 aa10.67□□□□□ -0.7
SCUBE2-201ENST00000309263 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.67□□□□□ -0.7
SCUBE2-201ENST00000309263 IGKV2-29A2NJV5 120 aaPredicted RBP10.67□□□□□ -0.7
SCUBE2-201ENST00000309263 I3L3M4 83 aa10.67□□□□□ -0.7
SCUBE2-201ENST00000309263 M0R2P5 195 aa10.67□□□□□ -0.7
SCUBE2-201ENST00000309263 SYNJ2BPP57105 145 aa10.67□□□□□ -0.7
SCUBE2-201ENST00000309263 C20orf203Q8NBC4 194 aa10.67□□□□□ -0.7
SCUBE2-201ENST00000309263 TNFRSF18Q9Y5U5 241 aa10.67□□□□□ -0.7
SCUBE2-201ENST00000309263 FBXL19-AS1Q494R0 122 aa10.66□□□□□ -0.7
SCUBE2-201ENST00000309263 AMELXQ99217 191 aa10.66□□□□□ -0.7
SCUBE2-201ENST00000309263 Q9UF83 564 aa10.66□□□□□ -0.7
SCUBE2-201ENST00000309263 IGLV4-3A0A075B6K6 122 aa10.66□□□□□ -0.7
SCUBE2-201ENST00000309263 IFITM1P13164 125 aa10.66□□□□□ -0.7
SCUBE2-201ENST00000309263 NDUFV3P56181 108 aaKnown RBP10.66□□□□□ -0.7
SCUBE2-201ENST00000309263 DGAT2L7PQ6IED9 249 aa10.66□□□□□ -0.7
SCUBE2-201ENST00000309263 IGHV1OR15-1A0A075B7D0 117 aa10.65□□□□□ -0.7
SCUBE2-201ENST00000309263 IGKV3OR2-268A0A0C4DH90 116 aa10.65□□□□□ -0.7
SCUBE2-201ENST00000309263 USMG5Q96IX5 58 aa10.65□□□□□ -0.7
SCUBE2-201ENST00000309263 IGHV4-61A0A0C4DH41 118 aa10.65□□□□□ -0.7
SCUBE2-201ENST00000309263 KLLNB2CW77 178 aa10.65□□□□□ -0.7
SCUBE2-201ENST00000309263 MED14OSP0DP75 135 aa10.65□□□□□ -0.7
SCUBE2-201ENST00000309263 ADAMTSL4-AS1Q5T5F5 129 aa10.65□□□□□ -0.7
SCUBE2-201ENST00000309263 MXRA5Q9NR99 2828 aa10.65□□□□□ -0.7
SCUBE2-201ENST00000309263 DEFB136Q30KP8 78 aa10.65□□□□□ -0.71
SCUBE2-201ENST00000309263 SMIM20Q8N5G0 67 aa10.64□□□□□ -0.71
SCUBE2-201ENST00000309263 GAGE12JA6NER3 117 aa10.63□□□□□ -0.71
SCUBE2-201ENST00000309263 GAGE7O76087 117 aa10.63□□□□□ -0.71
SCUBE2-201ENST00000309263 GAGE12FP0CL80 117 aa10.63□□□□□ -0.71
SCUBE2-201ENST00000309263 GAGE12GP0CL81 117 aa10.63□□□□□ -0.71
SCUBE2-201ENST00000309263 GAGE12IP0CL82 117 aa10.63□□□□□ -0.71
SCUBE2-201ENST00000309263 GAGE4Q13068 117 aa10.63□□□□□ -0.71
SCUBE2-201ENST00000309263 ICOSQ9Y6W8 199 aa10.63□□□□□ -0.71
SCUBE2-201ENST00000309263 RPL13AP40429 203 aaKnown RBP10.63□□□□□ -0.71
SCUBE2-201ENST00000309263 LGALS9O00182 355 aa10.62□□□□□ -0.71
SCUBE2-201ENST00000309263 HELZ2Q9BYK8 2649 aaKnown RBP10.62□□□□□ -0.71
SCUBE2-201ENST00000309263 UBR5O95071 2799 aaPredicted RBP10.62□□□□□ -0.71
SCUBE2-201ENST00000309263 DCANP1Q8TF63 244 aa10.62□□□□□ -0.71
SCUBE2-201ENST00000309263 A0A0B4J2C4 111 aa10.61□□□□□ -0.71
SCUBE2-201ENST00000309263 TRBV10-2A0A0K0K1G8 114 aa10.61□□□□□ -0.71
SCUBE2-201ENST00000309263 FAM19A4Q96LR4 140 aa10.61□□□□□ -0.71
SCUBE2-201ENST00000309263 RHOHQ15669 191 aa10.6□□□□□ -0.71
SCUBE2-201ENST00000309263 ATRQ13535 2644 aa10.6□□□□□ -0.71
SCUBE2-201ENST00000309263 IGHG2P01859 326 aa10.6□□□□□ -0.71
SCUBE2-201ENST00000309263 SBSPONQ8IVN8 264 aa10.6□□□□□ -0.71
SCUBE2-201ENST00000309263 NHLRC4P0CG21 123 aaPredicted RBP10.6□□□□□ -0.71
SCUBE2-201ENST00000309263 CHCHD5Q9BSY4 110 aa10.6□□□□□ -0.71
SCUBE2-201ENST00000309263 NBEAL1Q6ZS30 2694 aa10.59□□□□□ -0.71
SCUBE2-201ENST00000309263 A0A0J9YX75 114 aa10.59□□□□□ -0.71
SCUBE2-201ENST00000309263 H7C423 109 aa10.59□□□□□ -0.71
SCUBE2-201ENST00000309263 NXPH4O95158 308 aa10.59□□□□□ -0.71
SCUBE2-201ENST00000309263 NSUN5P1Q3KNT7 163 aa10.59□□□□□ -0.71
SCUBE2-201ENST00000309263 CITED1Q99966 193 aa10.58□□□□□ -0.72
SCUBE2-201ENST00000309263 DEFB131AP59861 70 aa10.58□□□□□ -0.72
SCUBE2-201ENST00000309263 CCL19Q99731 98 aa10.58□□□□□ -0.72
SCUBE2-201ENST00000309263 ITPR2Q14571 2701 aa10.58□□□□□ -0.72
SCUBE2-201ENST00000309263 F8P00451 2351 aa10.58□□□□□ -0.72
SCUBE2-201ENST00000309263 MEIG1Q5JSS6 88 aa10.58□□□□□ -0.72
SCUBE2-201ENST00000309263 ODF3Q96PU9 254 aa10.58□□□□□ -0.72
SCUBE2-201ENST00000309263 TRAV13-1A0A0B4J241 112 aa10.57□□□□□ -0.72
SCUBE2-201ENST00000309263 TRBV6-5A0A0K0K1A5 114 aa10.57□□□□□ -0.72
SCUBE2-201ENST00000309263 IGHV4-59P01825 116 aa10.57□□□□□ -0.72
SCUBE2-201ENST00000309263 C9orf85Q96MD7 179 aa10.57□□□□□ -0.72
SCUBE2-201ENST00000309263 PIMREGQ9BSJ6 248 aa10.57□□□□□ -0.72
SCUBE2-201ENST00000309263 TRGV11A0A075B6L2 103 aa10.57□□□□□ -0.72
SCUBE2-201ENST00000309263 POM121L12Q8N7R1 296 aa10.57□□□□□ -0.72
SCUBE2-201ENST00000309263 CDKN2A-AS1Q9UH64 79 aa10.57□□□□□ -0.72
SCUBE2-201ENST00000309263 IGHV1-58A0A0C4DH39 117 aa10.56□□□□□ -0.72
SCUBE2-201ENST00000309263 RPL32P62910 135 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms