RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 FOSL1P15407 271 aa17.3■□□□□ 0.36
RFWD2-201ENST00000308769 SEC11AP67812 179 aa17.3■□□□□ 0.36
RFWD2-201ENST00000308769 IGHV3-38A0A0C4DH36 116 aa17.29■□□□□ 0.36
RFWD2-201ENST00000308769 PLAC8L1A1L4L8 177 aa17.29■□□□□ 0.36
RFWD2-201ENST00000308769 E9PLD3 99 aa17.29■□□□□ 0.36
RFWD2-201ENST00000308769 GAGE1Q13065 139 aa17.29■□□□□ 0.36
RFWD2-201ENST00000308769 PHLDA1Q8WV24 401 aaPredicted RBP17.29■□□□□ 0.36
RFWD2-201ENST00000308769 PRADC1Q9BSG0 188 aa17.29■□□□□ 0.36
RFWD2-201ENST00000308769 C1QTNF4Q9BXJ3 329 aa17.29■□□□□ 0.36
RFWD2-201ENST00000308769 ZNRF2Q8NHG8 242 aa17.29■□□□□ 0.36
RFWD2-201ENST00000308769 IGLV4-3A0A075B6K6 122 aa17.28■□□□□ 0.36
RFWD2-201ENST00000308769 PAPPA-AS1Q5QFB9 102 aa17.27■□□□□ 0.36
RFWD2-201ENST00000308769 C16orf74Q96GX8 76 aa17.27■□□□□ 0.36
RFWD2-201ENST00000308769 DNAJC30Q96LL9 226 aa17.27■□□□□ 0.36
RFWD2-201ENST00000308769 CHCHD7Q9BUK0 85 aa17.27■□□□□ 0.35
RFWD2-201ENST00000308769 CEMP1Q6PRD7 247 aaPredicted RBP17.26■□□□□ 0.35
RFWD2-201ENST00000308769 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.26■□□□□ 0.35
RFWD2-201ENST00000308769 DAZ2Q13117 558 aaKnown RBP17.26■□□□□ 0.35
RFWD2-201ENST00000308769 FAM104AQ969W3 186 aa17.25■□□□□ 0.35
RFWD2-201ENST00000308769 MYMXA0A1B0GTQ4 84 aa17.24■□□□□ 0.35
RFWD2-201ENST00000308769 TMEM170BQ5T4T1 132 aa17.24■□□□□ 0.35
RFWD2-201ENST00000308769 TRAV4A0A0B4J268 109 aa17.24■□□□□ 0.35
RFWD2-201ENST00000308769 K7EP13 123 aa17.24■□□□□ 0.35
RFWD2-201ENST00000308769 GCSHP23434 173 aa17.24■□□□□ 0.35
RFWD2-201ENST00000308769 RRN3P1Q2M238 152 aa17.23■□□□□ 0.35
RFWD2-201ENST00000308769 PYGO1Q9Y3Y4 419 aa17.23■□□□□ 0.35
RFWD2-201ENST00000308769 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.23■□□□□ 0.35
RFWD2-201ENST00000308769 IGKV2-29A2NJV5 120 aaPredicted RBP17.23■□□□□ 0.35
RFWD2-201ENST00000308769 A6NDN8 102 aa17.23■□□□□ 0.35
RFWD2-201ENST00000308769 VCX2Q9H322 139 aa17.23■□□□□ 0.35
RFWD2-201ENST00000308769 FXYD2P54710 66 aa17.22■□□□□ 0.35
RFWD2-201ENST00000308769 COTL1Q14019 142 aa17.22■□□□□ 0.35
RFWD2-201ENST00000308769 GAGE12BA1L429 117 aa17.21■□□□□ 0.35
RFWD2-201ENST00000308769 GAGE7O76087 117 aa17.21■□□□□ 0.35
RFWD2-201ENST00000308769 GAGE12FP0CL80 117 aa17.21■□□□□ 0.35
RFWD2-201ENST00000308769 GAGE12GP0CL81 117 aa17.21■□□□□ 0.35
RFWD2-201ENST00000308769 GAGE12IP0CL82 117 aa17.21■□□□□ 0.35
RFWD2-201ENST00000308769 NFE4Q86UQ8 179 aa17.21■□□□□ 0.35
RFWD2-201ENST00000308769 K7EQD1 137 aa17.21■□□□□ 0.35
RFWD2-201ENST00000308769 HERVK_113P61574 105 aa17.21■□□□□ 0.35
RFWD2-201ENST00000308769 RNASE13Q5GAN3 156 aaKnown RBP17.21■□□□□ 0.35
RFWD2-201ENST00000308769 ATRQ13535 2644 aa17.2■□□□□ 0.34
RFWD2-201ENST00000308769 C9orf66Q5T8R8 295 aa17.2■□□□□ 0.34
RFWD2-201ENST00000308769 CITED1Q99966 193 aa17.2■□□□□ 0.34
RFWD2-201ENST00000308769 UBE2D4Q9Y2X8 147 aa17.2■□□□□ 0.34
RFWD2-201ENST00000308769 TRBV7-3A0A075B6L6 115 aa17.2■□□□□ 0.34
RFWD2-201ENST00000308769 ZNF815PA8K554 130 aa17.2■□□□□ 0.34
RFWD2-201ENST00000308769 INSL3P51460 131 aa17.2■□□□□ 0.34
RFWD2-201ENST00000308769 SLC25A29Q8N8R3 303 aa17.2■□□□□ 0.34
RFWD2-201ENST00000308769 A0A0J9YXV3 536 aa17.19■□□□□ 0.34
RFWD2-201ENST00000308769 AMELXQ99217 191 aa17.19■□□□□ 0.34
RFWD2-201ENST00000308769 TRGV2A0A075B6R0 118 aa17.18■□□□□ 0.34
RFWD2-201ENST00000308769 CEND1Q8N111 149 aa17.18■□□□□ 0.34
RFWD2-201ENST00000308769 TEP1Q99973 2627 aaKnown RBP17.18■□□□□ 0.34
RFWD2-201ENST00000308769 VAMP3Q15836 100 aa17.18■□□□□ 0.34
RFWD2-201ENST00000308769 F8P00451 2351 aa17.17■□□□□ 0.34
RFWD2-201ENST00000308769 TSPEAR-AS2P59090 65 aa17.17■□□□□ 0.34
RFWD2-201ENST00000308769 OVOL2Q9BRP0 275 aa17.17■□□□□ 0.34
RFWD2-201ENST00000308769 TRBV10-1A0A0K0K1A3 114 aa17.16■□□□□ 0.34
RFWD2-201ENST00000308769 RPL36AP83881 106 aaKnown RBP17.16■□□□□ 0.34
RFWD2-201ENST00000308769 RPL36ALQ969Q0 106 aaKnown RBP17.16■□□□□ 0.34
RFWD2-201ENST00000308769 SPANXA1Q9NS26 97 aa17.16■□□□□ 0.34
RFWD2-201ENST00000308769 H3BRM9 83 aa17.15■□□□□ 0.34
RFWD2-201ENST00000308769 CCL25O15444 150 aa17.15■□□□□ 0.34
RFWD2-201ENST00000308769 ZNF22P17026 224 aaPredicted RBP17.15■□□□□ 0.34
RFWD2-201ENST00000308769 RAB37Q96AX2 223 aa17.15■□□□□ 0.34
RFWD2-201ENST00000308769 PLEKHB2Q96CS7 222 aa17.15■□□□□ 0.34
RFWD2-201ENST00000308769 TM2D2Q9BX73 214 aa17.15■□□□□ 0.34
RFWD2-201ENST00000308769 HIST1H4GQ99525 98 aa17.15■□□□□ 0.34
RFWD2-201ENST00000308769 GAGE12JA6NER3 117 aa17.14■□□□□ 0.33
RFWD2-201ENST00000308769 PTTG1IPP53801 180 aa17.14■□□□□ 0.33
RFWD2-201ENST00000308769 GAGE4Q13068 117 aa17.14■□□□□ 0.33
RFWD2-201ENST00000308769 GAGE5Q13069 117 aa17.14■□□□□ 0.33
RFWD2-201ENST00000308769 UBE2V1Q13404 147 aa17.14■□□□□ 0.33
RFWD2-201ENST00000308769 GAGE13Q4V321 117 aa17.14■□□□□ 0.33
RFWD2-201ENST00000308769 Q6ZUT4 128 aa17.14■□□□□ 0.33
RFWD2-201ENST00000308769 TMEM223A0PJW6 202 aa17.13■□□□□ 0.33
RFWD2-201ENST00000308769 CRYBA4P53673 196 aa17.13■□□□□ 0.33
RFWD2-201ENST00000308769 TAL2Q16559 108 aa17.13■□□□□ 0.33
RFWD2-201ENST00000308769 SCGB1D4Q6XE38 83 aa17.13■□□□□ 0.33
RFWD2-201ENST00000308769 NAA38Q9BRA0 125 aaKnown RBP17.13■□□□□ 0.33
RFWD2-201ENST00000308769 UBE2D3P61077 147 aa17.12■□□□□ 0.33
RFWD2-201ENST00000308769 UBE2D2P62837 147 aa17.12■□□□□ 0.33
RFWD2-201ENST00000308769 AMMECR1LQ6DCA0 310 aa17.12■□□□□ 0.33
RFWD2-201ENST00000308769 TRRAPQ9Y4A5 3859 aa17.12■□□□□ 0.33
RFWD2-201ENST00000308769 IGHV3-64A0A075B6Q5 118 aa17.11■□□□□ 0.33
RFWD2-201ENST00000308769 K7ERJ3 54 aa17.11■□□□□ 0.33
RFWD2-201ENST00000308769 MRPS36P82909 103 aaKnown RBP17.11■□□□□ 0.33
RFWD2-201ENST00000308769 FLNBO75369 2602 aaKnown RBP17.11■□□□□ 0.33
RFWD2-201ENST00000308769 C9orf118A6NHY6 69 aa17.11■□□□□ 0.33
RFWD2-201ENST00000308769 NTM-AS1Q6ZSK4 140 aa17.11■□□□□ 0.33
RFWD2-201ENST00000308769 NHP2Q9NX24 153 aaKnown RBP17.11■□□□□ 0.33
RFWD2-201ENST00000308769 LOC100131303A0A0U1RQF7 123 aa17.1■□□□□ 0.33
RFWD2-201ENST00000308769 J3QQQ9 107 aa17.1■□□□□ 0.33
RFWD2-201ENST00000308769 DAZ4Q86SG3 579 aaKnown RBP17.1■□□□□ 0.33
RFWD2-201ENST00000308769 DAZ3Q9NR90 486 aaKnown RBP17.1■□□□□ 0.33
RFWD2-201ENST00000308769 H3BUT2 72 aa17.09■□□□□ 0.33
RFWD2-201ENST00000308769 SMIM13P0DJ93 91 aa17.09■□□□□ 0.33
RFWD2-201ENST00000308769 LINC00694P0DN24 101 aa17.09■□□□□ 0.33
RFWD2-201ENST00000308769 TRGV4A0A0C4DH28 118 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 190.5 ms