RNA–Protein interactions for RNA: ENST00000307972.8

FOXP4-201, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-201ENST00000307972 A0A0U1RRA0 63 aa8.64□□□□□ -1.03
FOXP4-201ENST00000307972 ODF3Q96PU9 254 aa8.64□□□□□ -1.03
FOXP4-201ENST00000307972 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.64□□□□□ -1.03
FOXP4-201ENST00000307972 IGKV2-29A2NJV5 120 aaPredicted RBP8.64□□□□□ -1.03
FOXP4-201ENST00000307972 K7EQG2 157 aa8.64□□□□□ -1.03
FOXP4-201ENST00000307972 CRLF1O75462 422 aa8.64□□□□□ -1.03
FOXP4-201ENST00000307972 IGHV3-38A0A0C4DH36 116 aa8.63□□□□□ -1.03
FOXP4-201ENST00000307972 MSMBP08118 114 aa8.63□□□□□ -1.03
FOXP4-201ENST00000307972 NDUFV3P56181 108 aaKnown RBP8.63□□□□□ -1.03
FOXP4-201ENST00000307972 Q6ZSV7 163 aa8.63□□□□□ -1.03
FOXP4-201ENST00000307972 DAND5Q8N907 189 aa8.63□□□□□ -1.03
FOXP4-201ENST00000307972 BRI3O95415 125 aa8.63□□□□□ -1.03
FOXP4-201ENST00000307972 YAE1D1Q9NRH1 226 aa8.63□□□□□ -1.03
FOXP4-201ENST00000307972 RPL13AP40429 203 aaKnown RBP8.63□□□□□ -1.03
FOXP4-201ENST00000307972 ADAMTSL4-AS1Q5T5F5 129 aa8.63□□□□□ -1.03
FOXP4-201ENST00000307972 IGHV4-59P01825 116 aa8.62□□□□□ -1.03
FOXP4-201ENST00000307972 CIRBPQ14011 172 aaKnown RBP8.62□□□□□ -1.03
FOXP4-201ENST00000307972 CITED1Q99966 193 aa8.62□□□□□ -1.03
FOXP4-201ENST00000307972 M0QXV9 152 aa8.62□□□□□ -1.03
FOXP4-201ENST00000307972 PRM2P04554 102 aa8.62□□□□□ -1.03
FOXP4-201ENST00000307972 DEFB131AP59861 70 aa8.62□□□□□ -1.03
FOXP4-201ENST00000307972 MRPS36P82909 103 aaKnown RBP8.62□□□□□ -1.03
FOXP4-201ENST00000307972 ZNF625Q96I27 306 aaPredicted RBP8.62□□□□□ -1.03
FOXP4-201ENST00000307972 IGHV4-30-2A0A087WSY4 118 aa8.61□□□□□ -1.03
FOXP4-201ENST00000307972 GAGE12JA6NER3 117 aa8.61□□□□□ -1.03
FOXP4-201ENST00000307972 GAGE7O76087 117 aa8.61□□□□□ -1.03
FOXP4-201ENST00000307972 GAGE12FP0CL80 117 aa8.61□□□□□ -1.03
FOXP4-201ENST00000307972 GAGE12GP0CL81 117 aa8.61□□□□□ -1.03
FOXP4-201ENST00000307972 GAGE12IP0CL82 117 aa8.61□□□□□ -1.03
FOXP4-201ENST00000307972 GAGE4Q13068 117 aa8.61□□□□□ -1.03
FOXP4-201ENST00000307972 MIAQ16674 131 aa8.61□□□□□ -1.03
FOXP4-201ENST00000307972 C10orf105Q8TEF2 133 aa8.61□□□□□ -1.03
FOXP4-201ENST00000307972 PYGO1Q9Y3Y4 419 aa8.61□□□□□ -1.03
FOXP4-201ENST00000307972 VSIG2Q96IQ7 327 aa8.6□□□□□ -1.03
FOXP4-201ENST00000307972 H7C423 109 aa8.6□□□□□ -1.03
FOXP4-201ENST00000307972 GNLYP22749 145 aa8.6□□□□□ -1.03
FOXP4-201ENST00000307972 PSMB8P28062 276 aa8.6□□□□□ -1.03
FOXP4-201ENST00000307972 H3BT86 120 aa8.59□□□□□ -1.03
FOXP4-201ENST00000307972 KHDC1LQ5JSQ8 128 aa8.59□□□□□ -1.03
FOXP4-201ENST00000307972 LINC01587Q99440 93 aa8.59□□□□□ -1.03
FOXP4-201ENST00000307972 C2CD3Q4AC94 2353 aa8.59□□□□□ -1.03
FOXP4-201ENST00000307972 SPANXDQ9BXN6 97 aa8.59□□□□□ -1.03
FOXP4-201ENST00000307972 SPANXCQ9NY87 97 aa8.59□□□□□ -1.03
FOXP4-201ENST00000307972 USP9YO00507 2555 aaPredicted RBP8.59□□□□□ -1.03
FOXP4-201ENST00000307972 TINCRA0A1B0GVN0 87 aa8.58□□□□□ -1.04
FOXP4-201ENST00000307972 HOXD3P31249 432 aaPredicted RBP8.58□□□□□ -1.04
FOXP4-201ENST00000307972 ZNF415Q09FC8 603 aa8.58□□□□□ -1.04
FOXP4-201ENST00000307972 DEFB112Q30KQ8 113 aa8.58□□□□□ -1.04
FOXP4-201ENST00000307972 SPANXA1Q9NS26 97 aa8.58□□□□□ -1.04
FOXP4-201ENST00000307972 B4DSR2 109 aa8.58□□□□□ -1.04
FOXP4-201ENST00000307972 AVPP01185 164 aa8.58□□□□□ -1.04
FOXP4-201ENST00000307972 LITAFQ99732 161 aa8.58□□□□□ -1.04
FOXP4-201ENST00000307972 Q9UF83 564 aa8.58□□□□□ -1.04
FOXP4-201ENST00000307972 CFHR3Q02985 330 aa8.58□□□□□ -1.04
FOXP4-201ENST00000307972 MEIG1Q5JSS6 88 aa8.58□□□□□ -1.04
FOXP4-201ENST00000307972 CDKN2A-AS1Q9UH64 79 aa8.58□□□□□ -1.04
FOXP4-201ENST00000307972 CCDC179H3BU77 68 aa8.57□□□□□ -1.04
FOXP4-201ENST00000307972 TMEM61Q8N0U2 210 aa8.57□□□□□ -1.04
FOXP4-201ENST00000307972 LINC00467Q9BRT7 94 aa8.57□□□□□ -1.04
FOXP4-201ENST00000307972 IGHV3OR16-12A0A075B7B8 117 aa8.57□□□□□ -1.04
FOXP4-201ENST00000307972 UBE2D4Q9Y2X8 147 aa8.57□□□□□ -1.04
FOXP4-201ENST00000307972 NHLRC4P0CG21 123 aaPredicted RBP8.56□□□□□ -1.04
FOXP4-201ENST00000307972 RBMY1A1P0DJD3 496 aaKnown RBP8.56□□□□□ -1.04
FOXP4-201ENST00000307972 RBMY1CP0DJD4 496 aa8.56□□□□□ -1.04
FOXP4-201ENST00000307972 RBMY1FQ15415 496 aaKnown RBP8.56□□□□□ -1.04
FOXP4-201ENST00000307972 LST1O00453 97 aa8.56□□□□□ -1.04
FOXP4-201ENST00000307972 CFAP161Q6P656 301 aa8.56□□□□□ -1.04
FOXP4-201ENST00000307972 Q9H8V8 135 aa8.56□□□□□ -1.04
FOXP4-201ENST00000307972 ZFHX3Q15911 3703 aa8.56□□□□□ -1.04
FOXP4-201ENST00000307972 DEFB136Q30KP8 78 aa8.55□□□□□ -1.04
FOXP4-201ENST00000307972 Q6ZSN1 163 aa8.55□□□□□ -1.04
FOXP4-201ENST00000307972 DYNLRB2Q8TF09 96 aa8.55□□□□□ -1.04
FOXP4-201ENST00000307972 CHCHD7Q9BUK0 85 aa8.55□□□□□ -1.04
FOXP4-201ENST00000307972 TRAV13-1A0A0B4J241 112 aa8.54□□□□□ -1.04
FOXP4-201ENST00000307972 MYO9AB2RTY4 2548 aa8.54□□□□□ -1.04
FOXP4-201ENST00000307972 SLURP1P55000 103 aa8.54□□□□□ -1.04
FOXP4-201ENST00000307972 Q6Q795 121 aa8.54□□□□□ -1.04
FOXP4-201ENST00000307972 MAPK1IP1LQ8NDC0 245 aa8.54□□□□□ -1.04
FOXP4-201ENST00000307972 PRIMA1Q86XR5 153 aa8.53□□□□□ -1.04
FOXP4-201ENST00000307972 TMEM101Q96IK0 257 aa8.53□□□□□ -1.04
FOXP4-201ENST00000307972 WNK1Q9H4A3 2382 aa8.52□□□□□ -1.04
FOXP4-201ENST00000307972 FAM104AQ969W3 186 aa8.52□□□□□ -1.05
FOXP4-201ENST00000307972 USP9XQ93008 2570 aaPredicted RBP8.52□□□□□ -1.05
FOXP4-201ENST00000307972 COPS9Q8WXC6 57 aa8.52□□□□□ -1.05
FOXP4-201ENST00000307972 NDUFA1O15239 70 aa8.52□□□□□ -1.05
FOXP4-201ENST00000307972 LINC00308Q8TCZ7 52 aa8.52□□□□□ -1.05
FOXP4-201ENST00000307972 CHCHD5Q9BSY4 110 aa8.52□□□□□ -1.05
FOXP4-201ENST00000307972 HERVK_113P63121 156 aa8.51□□□□□ -1.05
FOXP4-201ENST00000307972 TMEM89A2RUT3 159 aa8.51□□□□□ -1.05
FOXP4-201ENST00000307972 TIMM17BO60830 172 aa8.51□□□□□ -1.05
FOXP4-201ENST00000307972 IGHV3-53P01767 116 aa8.51□□□□□ -1.05
FOXP4-201ENST00000307972 XCL2Q9UBD3 114 aa8.51□□□□□ -1.05
FOXP4-201ENST00000307972 TRGV1A0A0A0MS02 117 aa8.51□□□□□ -1.05
FOXP4-201ENST00000307972 SMIM20Q8N5G0 67 aa8.51□□□□□ -1.05
FOXP4-201ENST00000307972 NRGNQ92686 78 aa8.51□□□□□ -1.05
FOXP4-201ENST00000307972 DNAJC30Q96LL9 226 aa8.51□□□□□ -1.05
FOXP4-201ENST00000307972 UBE2E2Q96LR5 201 aa8.51□□□□□ -1.05
FOXP4-201ENST00000307972 INSP01308 110 aa8.5□□□□□ -1.05
FOXP4-201ENST00000307972 MRPL23Q16540 153 aaKnown RBP8.5□□□□□ -1.05
FOXP4-201ENST00000307972 C3orf56Q8N813 242 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms