RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 F8VRH5 84 aa6.82□□□□□ -1.32
PTPRE-202ENST00000306042 GATD1Q8NB37 220 aa6.82□□□□□ -1.32
PTPRE-202ENST00000306042 NHP2Q9NX24 153 aaKnown RBP6.82□□□□□ -1.32
PTPRE-202ENST00000306042 CTAG1AP78358 180 aa6.81□□□□□ -1.32
PTPRE-202ENST00000306042 MRPL35Q9NZE8 188 aaKnown RBP6.81□□□□□ -1.32
PTPRE-202ENST00000306042 TRBV6-4A0A1B0GX49 114 aa6.81□□□□□ -1.32
PTPRE-202ENST00000306042 GAGE10A6NGK3 116 aa6.81□□□□□ -1.32
PTPRE-202ENST00000306042 SIVA1O15304 175 aa6.81□□□□□ -1.32
PTPRE-202ENST00000306042 CITED1Q99966 193 aa6.81□□□□□ -1.32
PTPRE-202ENST00000306042 SLC25A29Q8N8R3 303 aa6.81□□□□□ -1.32
PTPRE-202ENST00000306042 KLLNB2CW77 178 aa6.81□□□□□ -1.32
PTPRE-202ENST00000306042 CFAP126Q5VTH2 177 aa6.81□□□□□ -1.32
PTPRE-202ENST00000306042 TET2Q6N021 2002 aaPredicted RBP6.81□□□□□ -1.32
PTPRE-202ENST00000306042 M0R2N4 97 aa6.8□□□□□ -1.32
PTPRE-202ENST00000306042 DDTP30046 118 aa6.8□□□□□ -1.32
PTPRE-202ENST00000306042 C10orf91Q5T1B1 145 aa6.8□□□□□ -1.32
PTPRE-202ENST00000306042 A0A096LNT2 108 aa6.8□□□□□ -1.32
PTPRE-202ENST00000306042 STPG4Q8N801 248 aa6.8□□□□□ -1.32
PTPRE-202ENST00000306042 NDUFA1O15239 70 aa6.79□□□□□ -1.32
PTPRE-202ENST00000306042 RNF151Q2KHN1 245 aa6.79□□□□□ -1.32
PTPRE-202ENST00000306042 MLST8Q9BVC4 326 aa6.79□□□□□ -1.32
PTPRE-202ENST00000306042 GAGE2EQ4V326 116 aa6.79□□□□□ -1.32
PTPRE-202ENST00000306042 LINC00322Q6ZN03 302 aaPredicted RBP6.79□□□□□ -1.32
PTPRE-202ENST00000306042 GAGE2DQ9UEU5 116 aa6.79□□□□□ -1.32
PTPRE-202ENST00000306042 ERG28Q9UKR5 140 aa6.79□□□□□ -1.32
PTPRE-202ENST00000306042 CCL25O15444 150 aa6.79□□□□□ -1.32
PTPRE-202ENST00000306042 RS1O15537 224 aa6.79□□□□□ -1.32
PTPRE-202ENST00000306042 RPL39P62891 51 aaKnown RBP6.79□□□□□ -1.32
PTPRE-202ENST00000306042 ZNF664Q8N3J9 261 aa6.79□□□□□ -1.32
PTPRE-202ENST00000306042 PGPEP1Q9NXJ5 209 aa6.79□□□□□ -1.32
PTPRE-202ENST00000306042 PRM2P04554 102 aa6.79□□□□□ -1.32
PTPRE-202ENST00000306042 TIRAPP58753 221 aa6.79□□□□□ -1.32
PTPRE-202ENST00000306042 GAGE2BQ13066 116 aa6.78□□□□□ -1.32
PTPRE-202ENST00000306042 LINC00269Q8N2A0 174 aa6.78□□□□□ -1.32
PTPRE-202ENST00000306042 MGAQ8IWI9 3026 aa6.78□□□□□ -1.32
PTPRE-202ENST00000306042 IGLC6P0CF74 106 aa6.78□□□□□ -1.32
PTPRE-202ENST00000306042 TRIOO75962 3097 aa6.78□□□□□ -1.32
PTPRE-202ENST00000306042 REG3AQ06141 175 aa6.78□□□□□ -1.32
PTPRE-202ENST00000306042 SPAG11BQ08648 103 aa6.78□□□□□ -1.32
PTPRE-202ENST00000306042 TSPAN13O95857 204 aa6.78□□□□□ -1.32
PTPRE-202ENST00000306042 BAHCC1Q9P281 2608 aa6.77□□□□□ -1.33
PTPRE-202ENST00000306042 DSPP15924 2871 aaKnown RBP6.77□□□□□ -1.33
PTPRE-202ENST00000306042 A0A0J9YXV3 536 aa6.77□□□□□ -1.33
PTPRE-202ENST00000306042 GAGE12HA6NDE8 117 aa6.77□□□□□ -1.33
PTPRE-202ENST00000306042 HSD52Q0P140 79 aa6.77□□□□□ -1.33
PTPRE-202ENST00000306042 MGAM2Q2M2H8 2515 aa6.77□□□□□ -1.33
PTPRE-202ENST00000306042 DSCAML1Q8TD84 2053 aa6.77□□□□□ -1.33
PTPRE-202ENST00000306042 J3QQQ9 107 aa6.77□□□□□ -1.33
PTPRE-202ENST00000306042 MRGPRG-AS1Q2M3A8 158 aa6.77□□□□□ -1.33
PTPRE-202ENST00000306042 LGALS9CQ6DKI2 356 aa6.77□□□□□ -1.33
PTPRE-202ENST00000306042 ATRQ13535 2644 aa6.77□□□□□ -1.33
PTPRE-202ENST00000306042 IGLV2-8P01709 118 aa6.77□□□□□ -1.33
PTPRE-202ENST00000306042 PRR9Q5T870 116 aa6.77□□□□□ -1.33
PTPRE-202ENST00000306042 C20orf203Q8NBC4 194 aa6.77□□□□□ -1.33
PTPRE-202ENST00000306042 VPS25Q9BRG1 176 aa6.77□□□□□ -1.33
PTPRE-202ENST00000306042 Q9H8V8 135 aa6.77□□□□□ -1.33
PTPRE-202ENST00000306042 NEXN-AS1Q8NBZ9 246 aa6.76□□□□□ -1.33
PTPRE-202ENST00000306042 FHL3Q13643 280 aa6.76□□□□□ -1.33
PTPRE-202ENST00000306042 TRBV6-8A0A0A6YYG3 113 aa6.76□□□□□ -1.33
PTPRE-202ENST00000306042 CRIP1P50238 77 aa6.76□□□□□ -1.33
PTPRE-202ENST00000306042 Q6ZTC4 211 aa6.76□□□□□ -1.33
PTPRE-202ENST00000306042 KRTAP1-3Q8IUG1 177 aa6.76□□□□□ -1.33
PTPRE-202ENST00000306042 BOD1L2Q8IYS8 172 aa6.75□□□□□ -1.33
PTPRE-202ENST00000306042 COL27A1Q8IZC6 1860 aaPredicted RBP6.75□□□□□ -1.33
PTPRE-202ENST00000306042 CLUHP3Q96NS8 147 aa6.75□□□□□ -1.33
PTPRE-202ENST00000306042 DKK2Q9UBU2 259 aa6.75□□□□□ -1.33
PTPRE-202ENST00000306042 SZT2Q5T011 3432 aa6.75□□□□□ -1.33
PTPRE-202ENST00000306042 IGLV2-11P01706 119 aa6.75□□□□□ -1.33
PTPRE-202ENST00000306042 HERV-K104P63124 156 aa6.75□□□□□ -1.33
PTPRE-202ENST00000306042 TIMM17AQ99595 171 aa6.75□□□□□ -1.33
PTPRE-202ENST00000306042 TNRC18O15417 2968 aaPredicted RBP6.75□□□□□ -1.33
PTPRE-202ENST00000306042 AKAP13Q12802 2813 aa6.75□□□□□ -1.33
PTPRE-202ENST00000306042 C1orf134Q5TEV5 83 aa6.75□□□□□ -1.33
PTPRE-202ENST00000306042 LINC00518Q8N0U6 118 aa6.75□□□□□ -1.33
PTPRE-202ENST00000306042 MUC7Q8TAX7 377 aa6.75□□□□□ -1.33
PTPRE-202ENST00000306042 COX7B2Q8TF08 81 aa6.75□□□□□ -1.33
PTPRE-202ENST00000306042 MRPS12O15235 138 aaKnown RBP6.74□□□□□ -1.33
PTPRE-202ENST00000306042 RNASE3P12724 160 aaKnown RBP6.74□□□□□ -1.33
PTPRE-202ENST00000306042 BEAN1Q3B7T3 259 aa6.74□□□□□ -1.33
PTPRE-202ENST00000306042 LAMTOR3Q9UHA4 124 aa6.74□□□□□ -1.33
PTPRE-202ENST00000306042 IGSF10Q6WRI0 2623 aa6.74□□□□□ -1.33
PTPRE-202ENST00000306042 CXCL5P42830 114 aa6.74□□□□□ -1.33
PTPRE-202ENST00000306042 HIGD2BQ4VC39 106 aa6.74□□□□□ -1.33
PTPRE-202ENST00000306042 LELP1Q5T871 98 aa6.74□□□□□ -1.33
PTPRE-202ENST00000306042 C1orf158Q8N1D5 194 aa6.74□□□□□ -1.33
PTPRE-202ENST00000306042 TMEM126AQ9H061 195 aa6.74□□□□□ -1.33
PTPRE-202ENST00000306042 WDFY4Q6ZS81 3184 aa6.74□□□□□ -1.33
PTPRE-202ENST00000306042 IGKV2-24A0A0C4DH68 120 aa6.74□□□□□ -1.33
PTPRE-202ENST00000306042 H7C423 109 aa6.74□□□□□ -1.33
PTPRE-202ENST00000306042 CEMP1Q6PRD7 247 aaPredicted RBP6.74□□□□□ -1.33
PTPRE-202ENST00000306042 LINC00474Q9P2X8 69 aa6.74□□□□□ -1.33
PTPRE-202ENST00000306042 B9D2Q9BPU9 175 aa6.73□□□□□ -1.33
PTPRE-202ENST00000306042 M0QY20 66 aa6.73□□□□□ -1.33
PTPRE-202ENST00000306042 OVOL2Q9BRP0 275 aa6.73□□□□□ -1.33
PTPRE-202ENST00000306042 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.73□□□□□ -1.33
PTPRE-202ENST00000306042 Q8N976 141 aa6.73□□□□□ -1.33
PTPRE-202ENST00000306042 CHCHD10Q8WYQ3 142 aaPredicted RBP6.73□□□□□ -1.33
PTPRE-202ENST00000306042 C9orf85Q96MD7 179 aa6.73□□□□□ -1.33
PTPRE-202ENST00000306042 C11orf21Q9P2W6 132 aa6.73□□□□□ -1.33
PTPRE-202ENST00000306042 MAST4O15021 2626 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms