RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 IGLV2-18A0A075B6J9 118 aa8.22□□□□□ -1.09
LSM3-201ENST00000306024 DNAJC9-AS1A6NH13 148 aa8.22□□□□□ -1.09
LSM3-201ENST00000306024 FAM223BA6NKX1 122 aa8.22□□□□□ -1.09
LSM3-201ENST00000306024 FAM223AQ8IWN6 122 aa8.22□□□□□ -1.09
LSM3-201ENST00000306024 TEX15Q9BXT5 2789 aa8.21□□□□□ -1.09
LSM3-201ENST00000306024 VCYO14598 125 aa8.21□□□□□ -1.09
LSM3-201ENST00000306024 TRACP01848 142 aa8.21□□□□□ -1.09
LSM3-201ENST00000306024 C3orf22Q8N5N4 141 aa8.21□□□□□ -1.09
LSM3-201ENST00000306024 FANCD2OSQ96PS1 177 aa8.21□□□□□ -1.09
LSM3-201ENST00000306024 A0A0U1RRA0 63 aa8.21□□□□□ -1.1
LSM3-201ENST00000306024 UQCRQO14949 82 aa8.21□□□□□ -1.1
LSM3-201ENST00000306024 KLK5Q9Y337 293 aaPredicted RBP8.21□□□□□ -1.1
LSM3-201ENST00000306024 H3BT86 120 aa8.21□□□□□ -1.1
LSM3-201ENST00000306024 ICOSQ9Y6W8 199 aa8.21□□□□□ -1.1
LSM3-201ENST00000306024 KRTAP1-3Q8IUG1 177 aa8.2□□□□□ -1.1
LSM3-201ENST00000306024 CNFNQ9BYD5 112 aa8.2□□□□□ -1.1
LSM3-201ENST00000306024 C2CD3Q4AC94 2353 aa8.2□□□□□ -1.1
LSM3-201ENST00000306024 A0A087WWL8 130 aa8.2□□□□□ -1.1
LSM3-201ENST00000306024 TRIAP1O43715 76 aa8.2□□□□□ -1.1
LSM3-201ENST00000306024 TMEM141Q96I45 108 aa8.2□□□□□ -1.1
LSM3-201ENST00000306024 P0DMU3 169 aa8.2□□□□□ -1.1
LSM3-201ENST00000306024 FAM231AP0DMU4 169 aa8.2□□□□□ -1.1
LSM3-201ENST00000306024 FAM231CP0DMU5 169 aa8.2□□□□□ -1.1
LSM3-201ENST00000306024 SBSPONQ8IVN8 264 aa8.2□□□□□ -1.1
LSM3-201ENST00000306024 SORL1Q92673 2214 aa8.2□□□□□ -1.1
LSM3-201ENST00000306024 TEP1Q99973 2627 aaKnown RBP8.19□□□□□ -1.1
LSM3-201ENST00000306024 FAM19A5Q7Z5A7 132 aaPredicted RBP8.19□□□□□ -1.1
LSM3-201ENST00000306024 A0A0B4J2C4 111 aa8.19□□□□□ -1.1
LSM3-201ENST00000306024 RBAKDNA6NC62 111 aa8.19□□□□□ -1.1
LSM3-201ENST00000306024 SRSF2Q01130 221 aaKnown RBP8.19□□□□□ -1.1
LSM3-201ENST00000306024 TIMM21Q9BVV7 248 aa8.19□□□□□ -1.1
LSM3-201ENST00000306024 MDFICQ9P1T7 246 aa8.19□□□□□ -1.1
LSM3-201ENST00000306024 SDHAF1A6NFY7 115 aa8.19□□□□□ -1.1
LSM3-201ENST00000306024 ZANQ9Y493 2812 aa8.18□□□□□ -1.1
LSM3-201ENST00000306024 DYNLRB2Q8TF09 96 aa8.18□□□□□ -1.1
LSM3-201ENST00000306024 C11orf21Q9P2W6 132 aa8.18□□□□□ -1.1
LSM3-201ENST00000306024 CIRBPQ14011 172 aaKnown RBP8.18□□□□□ -1.1
LSM3-201ENST00000306024 MRGPRG-AS1Q2M3A8 158 aa8.18□□□□□ -1.1
LSM3-201ENST00000306024 TMEM86BQ8N661 226 aa8.18□□□□□ -1.1
LSM3-201ENST00000306024 TENM4Q6N022 2769 aa8.18□□□□□ -1.1
LSM3-201ENST00000306024 ZNF22P17026 224 aaPredicted RBP8.18□□□□□ -1.1
LSM3-201ENST00000306024 ASH1LQ9NR48 2969 aaKnown RBP8.17□□□□□ -1.1
LSM3-201ENST00000306024 LEPROTO15243 131 aa8.17□□□□□ -1.1
LSM3-201ENST00000306024 DNAL4O96015 105 aa8.17□□□□□ -1.1
LSM3-201ENST00000306024 IGF1P05019 195 aa8.17□□□□□ -1.1
LSM3-201ENST00000306024 ELANEP08246 267 aa8.17□□□□□ -1.1
LSM3-201ENST00000306024 TRAV13-1A0A0B4J241 112 aa8.17□□□□□ -1.1
LSM3-201ENST00000306024 ACYP1P07311 99 aa8.17□□□□□ -1.1
LSM3-201ENST00000306024 LINC01546A6NGU7 62 aa8.17□□□□□ -1.1
LSM3-201ENST00000306024 H3BUA1 57 aa8.17□□□□□ -1.1
LSM3-201ENST00000306024 CD28P10747 220 aa8.17□□□□□ -1.1
LSM3-201ENST00000306024 TSPEAR-AS2P59090 65 aa8.17□□□□□ -1.1
LSM3-201ENST00000306024 NSUN5P1Q3KNT7 163 aa8.17□□□□□ -1.1
LSM3-201ENST00000306024 TMEM263Q8WUH6 116 aaKnown RBP8.17□□□□□ -1.1
LSM3-201ENST00000306024 hADV29S1A0JD25 119 aa8.16□□□□□ -1.1
LSM3-201ENST00000306024 DGAT2L7PQ6IED9 249 aa8.16□□□□□ -1.1
LSM3-201ENST00000306024 C9orf139Q6ZV77 190 aa8.16□□□□□ -1.1
LSM3-201ENST00000306024 SPANXDQ9BXN6 97 aa8.16□□□□□ -1.1
LSM3-201ENST00000306024 CTSGP08311 255 aa8.16□□□□□ -1.1
LSM3-201ENST00000306024 NDUFA12Q9UI09 145 aa8.16□□□□□ -1.1
LSM3-201ENST00000306024 A0A0J9YXV3 536 aa8.16□□□□□ -1.1
LSM3-201ENST00000306024 H7C423 109 aa8.16□□□□□ -1.1
LSM3-201ENST00000306024 C10orf99Q6UWK7 81 aa8.16□□□□□ -1.1
LSM3-201ENST00000306024 LINC00643Q86TS7 51 aa8.16□□□□□ -1.1
LSM3-201ENST00000306024 SYNJ2BPP57105 145 aa8.15□□□□□ -1.1
LSM3-201ENST00000306024 OPRPNQ99935 248 aaPredicted RBP8.15□□□□□ -1.1
LSM3-201ENST00000306024 CR1P17927 2039 aa8.15□□□□□ -1.1
LSM3-201ENST00000306024 PF4P02776 101 aa8.15□□□□□ -1.1
LSM3-201ENST00000306024 HTN1P15515 57 aa8.15□□□□□ -1.1
LSM3-201ENST00000306024 LINC01587Q99440 93 aa8.15□□□□□ -1.1
LSM3-201ENST00000306024 TRBV30A0A0K0K1B3 111 aa8.15□□□□□ -1.11
LSM3-201ENST00000306024 GNRH2O43555 120 aa8.15□□□□□ -1.11
LSM3-201ENST00000306024 IGHV7-4-1A0A0J9YVY3 117 aa8.14□□□□□ -1.11
LSM3-201ENST00000306024 Q6ZSV7 163 aa8.14□□□□□ -1.11
LSM3-201ENST00000306024 SMAD5-AS1Q9Y6J3 95 aa8.14□□□□□ -1.11
LSM3-201ENST00000306024 DEFB136Q30KP8 78 aa8.14□□□□□ -1.11
LSM3-201ENST00000306024 A0A1B0GX51 115 aa8.14□□□□□ -1.11
LSM3-201ENST00000306024 ATOX1O00244 68 aa8.14□□□□□ -1.11
LSM3-201ENST00000306024 ZNF702PQ9H963 129 aa8.14□□□□□ -1.11
LSM3-201ENST00000306024 IGKV3-20P01619 116 aa8.13□□□□□ -1.11
LSM3-201ENST00000306024 ZNF876PQ49A33 203 aa8.13□□□□□ -1.11
LSM3-201ENST00000306024 CEMP1Q6PRD7 247 aaPredicted RBP8.13□□□□□ -1.11
LSM3-201ENST00000306024 TRBV12-3P01733 135 aa8.13□□□□□ -1.11
LSM3-201ENST00000306024 HIST1H4AP62805 103 aaKnown RBP8.13□□□□□ -1.11
LSM3-201ENST00000306024 LINC00477Q96M19 166 aa8.13□□□□□ -1.11
LSM3-201ENST00000306024 FSHBP01225 129 aa8.13□□□□□ -1.11
LSM3-201ENST00000306024 RHOHQ15669 191 aa8.13□□□□□ -1.11
LSM3-201ENST00000306024 ZNF625Q96I27 306 aaPredicted RBP8.13□□□□□ -1.11
LSM3-201ENST00000306024 CCDC140Q96MF4 163 aa8.13□□□□□ -1.11
LSM3-201ENST00000306024 TIMM17AQ99595 171 aa8.13□□□□□ -1.11
LSM3-201ENST00000306024 PEMTQ9UBM1 199 aa8.13□□□□□ -1.11
LSM3-201ENST00000306024 A0A0J9YXY3 114 aa8.12□□□□□ -1.11
LSM3-201ENST00000306024 F5H768 121 aa8.12□□□□□ -1.11
LSM3-201ENST00000306024 COX8CQ7Z4L0 72 aa8.12□□□□□ -1.11
LSM3-201ENST00000306024 IMUPQ9GZP8 106 aa8.12□□□□□ -1.11
LSM3-201ENST00000306024 DAZ1Q9NQZ3 744 aaKnown RBP8.12□□□□□ -1.11
LSM3-201ENST00000306024 SPANXCQ9NY87 97 aa8.12□□□□□ -1.11
LSM3-201ENST00000306024 BUB3O43684 328 aa8.12□□□□□ -1.11
LSM3-201ENST00000306024 HILS1P60008 231 aa8.12□□□□□ -1.11
LSM3-201ENST00000306024 RHPN1-AS1Q9BWJ2 59 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms