RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 A8MZ25 164 aa3.9□□□□□ -1.79
VPS50-202ENST00000305866 I3L3M4 83 aa3.9□□□□□ -1.79
VPS50-202ENST00000305866 TIRAPP58753 221 aa3.9□□□□□ -1.79
VPS50-202ENST00000305866 ZFAND6Q6FIF0 208 aa3.9□□□□□ -1.79
VPS50-202ENST00000305866 UBR5O95071 2799 aaPredicted RBP3.9□□□□□ -1.79
VPS50-202ENST00000305866 SPTBN1Q01082 2364 aaKnown RBP3.9□□□□□ -1.79
VPS50-202ENST00000305866 A0A0J9YXV3 536 aa3.9□□□□□ -1.79
VPS50-202ENST00000305866 COX6A2Q02221 97 aa3.9□□□□□ -1.79
VPS50-202ENST00000305866 C9orf129Q5T035 196 aaKnown RBP3.9□□□□□ -1.79
VPS50-202ENST00000305866 ZNF625Q96I27 306 aaPredicted RBP3.9□□□□□ -1.79
VPS50-202ENST00000305866 C16orf95Q9H693 158 aa3.9□□□□□ -1.79
VPS50-202ENST00000305866 SPANXA1Q9NS26 97 aa3.9□□□□□ -1.79
VPS50-202ENST00000305866 H3BMM0 161 aa3.89□□□□□ -1.79
VPS50-202ENST00000305866 MIAQ16674 131 aa3.89□□□□□ -1.79
VPS50-202ENST00000305866 DEFB112Q30KQ8 113 aa3.89□□□□□ -1.79
VPS50-202ENST00000305866 SFTA2Q6UW10 78 aa3.89□□□□□ -1.79
VPS50-202ENST00000305866 FAM159AQ6UWV7 190 aa3.89□□□□□ -1.79
VPS50-202ENST00000305866 BRD3OSQ6XYD6 125 aa3.89□□□□□ -1.79
VPS50-202ENST00000305866 FAM218AQ96MZ4 157 aa3.89□□□□□ -1.79
VPS50-202ENST00000305866 ANKHD1Q8IWZ3 2542 aaKnown RBP3.89□□□□□ -1.79
VPS50-202ENST00000305866 MAP1AP78559 2803 aaPredicted RBP3.89□□□□□ -1.79
VPS50-202ENST00000305866 TMEM262E9PQX1 116 aa3.89□□□□□ -1.79
VPS50-202ENST00000305866 SNRPD3P62318 126 aaKnown RBP3.89□□□□□ -1.79
VPS50-202ENST00000305866 SPXQ9BT56 116 aa3.89□□□□□ -1.79
VPS50-202ENST00000305866 A0A087WWL8 130 aa3.89□□□□□ -1.79
VPS50-202ENST00000305866 TRAV8-3A0A0A6YYJ7 113 aa3.89□□□□□ -1.79
VPS50-202ENST00000305866 IGHV1-58A0A0C4DH39 117 aa3.89□□□□□ -1.79
VPS50-202ENST00000305866 A8MWV9 139 aa3.89□□□□□ -1.79
VPS50-202ENST00000305866 GAGE5Q13069 117 aa3.89□□□□□ -1.79
VPS50-202ENST00000305866 GAGE6Q13070 117 aa3.89□□□□□ -1.79
VPS50-202ENST00000305866 CEMP1Q6PRD7 247 aaPredicted RBP3.89□□□□□ -1.79
VPS50-202ENST00000305866 C10orf99Q6UWK7 81 aa3.89□□□□□ -1.79
VPS50-202ENST00000305866 DEFB104AQ8WTQ1 72 aa3.89□□□□□ -1.79
VPS50-202ENST00000305866 UPK3BQ9BT76 320 aa3.89□□□□□ -1.79
VPS50-202ENST00000305866 SS18L2Q9UHA2 77 aa3.89□□□□□ -1.79
VPS50-202ENST00000305866 KLK5Q9Y337 293 aaPredicted RBP3.89□□□□□ -1.79
VPS50-202ENST00000305866 IGHV3-53P01767 116 aa3.88□□□□□ -1.79
VPS50-202ENST00000305866 LINC00527Q9UJ94 153 aa3.88□□□□□ -1.79
VPS50-202ENST00000305866 ICOSQ9Y6W8 199 aa3.88□□□□□ -1.79
VPS50-202ENST00000305866 TLN1Q9Y490 2541 aaKnown RBP3.88□□□□□ -1.79
VPS50-202ENST00000305866 EP300Q09472 2414 aaPredicted RBP3.88□□□□□ -1.79
VPS50-202ENST00000305866 NTN5Q8WTR8 489 aaPredicted RBP3.88□□□□□ -1.79
VPS50-202ENST00000305866 Q96MF0 132 aa3.88□□□□□ -1.79
VPS50-202ENST00000305866 CACNA1BQ00975 2339 aa3.88□□□□□ -1.79
VPS50-202ENST00000305866 C9JAW5 83 aa3.88□□□□□ -1.79
VPS50-202ENST00000305866 J3QR89 54 aa3.88□□□□□ -1.79
VPS50-202ENST00000305866 IGHV4-59P01825 116 aa3.88□□□□□ -1.79
VPS50-202ENST00000305866 HERVK_113P61574 105 aa3.88□□□□□ -1.79
VPS50-202ENST00000305866 TNFRSF18Q9Y5U5 241 aa3.88□□□□□ -1.79
VPS50-202ENST00000305866 PDZD2O15018 2839 aa3.87□□□□□ -1.79
VPS50-202ENST00000305866 H3BT86 120 aa3.87□□□□□ -1.79
VPS50-202ENST00000305866 NDUFA1O15239 70 aa3.87□□□□□ -1.79
VPS50-202ENST00000305866 HOXD3P31249 432 aaPredicted RBP3.87□□□□□ -1.79
VPS50-202ENST00000305866 TEX29Q8N6K0 151 aa3.87□□□□□ -1.79
VPS50-202ENST00000305866 RAX2Q96IS3 184 aa3.87□□□□□ -1.79
VPS50-202ENST00000305866 FLNCQ14315 2725 aa3.87□□□□□ -1.79
VPS50-202ENST00000305866 IGHV3OR16-12A0A075B7B8 117 aa3.87□□□□□ -1.79
VPS50-202ENST00000305866 PRM2P04554 102 aa3.87□□□□□ -1.79
VPS50-202ENST00000305866 PF4V1P10720 104 aa3.87□□□□□ -1.79
VPS50-202ENST00000305866 ATP5J2P56134 94 aa3.87□□□□□ -1.79
VPS50-202ENST00000305866 LINC00612Q8N6U2 182 aa3.87□□□□□ -1.79
VPS50-202ENST00000305866 IGKV2-28A0A075B6P5 120 aa3.87□□□□□ -1.79
VPS50-202ENST00000305866 OXTP01178 125 aa3.87□□□□□ -1.79
VPS50-202ENST00000305866 IGKV2D-28P01615 120 aa3.87□□□□□ -1.79
VPS50-202ENST00000305866 LYRM7Q5U5X0 104 aa3.87□□□□□ -1.79
VPS50-202ENST00000305866 NTM-AS1Q6ZSK4 140 aa3.87□□□□□ -1.79
VPS50-202ENST00000305866 TRAV8-4A0A0B4J246 113 aa3.86□□□□□ -1.79
VPS50-202ENST00000305866 PLAC8L1A1L4L8 177 aa3.86□□□□□ -1.79
VPS50-202ENST00000305866 EPM2AB3EWF7 344 aa3.86□□□□□ -1.79
VPS50-202ENST00000305866 CLEC2BQ92478 149 aa3.86□□□□□ -1.79
VPS50-202ENST00000305866 TMEM101Q96IK0 257 aa3.86□□□□□ -1.79
VPS50-202ENST00000305866 TRBV10-1A0A0K0K1A3 114 aa3.86□□□□□ -1.79
VPS50-202ENST00000305866 S100A4P26447 101 aaKnown RBP3.86□□□□□ -1.79
VPS50-202ENST00000305866 SRSF9Q13242 221 aaKnown RBP eCLIP3.86□□□□□ -1.79
VPS50-202ENST00000305866 DEFB114Q30KQ6 69 aa3.86□□□□□ -1.79
VPS50-202ENST00000305866 OVOL2Q9BRP0 275 aa3.86□□□□□ -1.79
VPS50-202ENST00000305866 DYNC2H1Q8NCM8 4307 aaKnown RBP3.86□□□□□ -1.79
VPS50-202ENST00000305866 LOC107984156A0A0G2JMH3 177 aa3.85□□□□□ -1.79
VPS50-202ENST00000305866 DAZ2Q13117 558 aaKnown RBP3.85□□□□□ -1.79
VPS50-202ENST00000305866 ARL17AQ8IVW1 177 aa3.85□□□□□ -1.79
VPS50-202ENST00000305866 LINC00167Q96N53 147 aa3.85□□□□□ -1.79
VPS50-202ENST00000305866 PTPRQQ9UMZ3 2332 aa3.85□□□□□ -1.79
VPS50-202ENST00000305866 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.85□□□□□ -1.79
VPS50-202ENST00000305866 B5MCH6 92 aa3.85□□□□□ -1.79
VPS50-202ENST00000305866 CMC4P56277 68 aaPredicted RBP3.85□□□□□ -1.79
VPS50-202ENST00000305866 RPL11P62913 178 aaKnown RBP3.85□□□□□ -1.79
VPS50-202ENST00000305866 ATXN8Q156A1 80 aa3.85□□□□□ -1.79
VPS50-202ENST00000305866 LINC00242Q5T6M2 205 aa3.85□□□□□ -1.79
VPS50-202ENST00000305866 C2orf82Q6UX34 121 aa3.85□□□□□ -1.79
VPS50-202ENST00000305866 MAP6D1Q9H9H5 199 aa3.85□□□□□ -1.79
VPS50-202ENST00000305866 PEMTQ9UBM1 199 aa3.85□□□□□ -1.79
VPS50-202ENST00000305866 CACNA1HO95180 2353 aa3.85□□□□□ -1.79
VPS50-202ENST00000305866 HIVEP3Q5T1R4 2406 aa3.85□□□□□ -1.79
VPS50-202ENST00000305866 TRAV12-2A0A075B6T6 113 aa3.85□□□□□ -1.79
VPS50-202ENST00000305866 TRAV12-3A0A0B4J271 114 aa3.85□□□□□ -1.79
VPS50-202ENST00000305866 ADARB2-AS1A8MUL3 147 aa3.85□□□□□ -1.79
VPS50-202ENST00000305866 SMIM1B2RUZ4 78 aa3.85□□□□□ -1.79
VPS50-202ENST00000305866 TGFAP01135 160 aa3.85□□□□□ -1.79
VPS50-202ENST00000305866 MGPP08493 103 aa3.85□□□□□ -1.79
VPS50-202ENST00000305866 GIG44P09565 113 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms