RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 TEN1Q86WV5 123 aa4.21□□□□□ -1.73
ZNF440-201ENST00000304060 PHLDA3Q9Y5J5 127 aa4.21□□□□□ -1.73
ZNF440-201ENST00000304060 TRGV1A0A0A0MS02 117 aa4.21□□□□□ -1.74
ZNF440-201ENST00000304060 TRAV21A0A0B4J279 112 aa4.21□□□□□ -1.74
ZNF440-201ENST00000304060 RNASE2P10153 161 aaKnown RBP4.21□□□□□ -1.74
ZNF440-201ENST00000304060 GCSHP23434 173 aa4.21□□□□□ -1.74
ZNF440-201ENST00000304060 SPANXN1Q5VSR9 72 aa4.21□□□□□ -1.74
ZNF440-201ENST00000304060 CEND1Q8N111 149 aa4.21□□□□□ -1.74
ZNF440-201ENST00000304060 TMEM101Q96IK0 257 aa4.21□□□□□ -1.74
ZNF440-201ENST00000304060 NAA38Q9BRA0 125 aaKnown RBP4.21□□□□□ -1.74
ZNF440-201ENST00000304060 SRRM4A7MD48 611 aaKnown RBP4.21□□□□□ -1.74
ZNF440-201ENST00000304060 K7EQG2 157 aa4.21□□□□□ -1.74
ZNF440-201ENST00000304060 APOHP02749 345 aaPredicted RBP4.21□□□□□ -1.74
ZNF440-201ENST00000304060 TP73-AS1Q9UF72 201 aa4.21□□□□□ -1.74
ZNF440-201ENST00000304060 WDR83OSQ9Y284 106 aa4.21□□□□□ -1.74
ZNF440-201ENST00000304060 RTL8CO15255 209 aa4.2□□□□□ -1.74
ZNF440-201ENST00000304060 IGLV2-14P01704 120 aa4.2□□□□□ -1.74
ZNF440-201ENST00000304060 PRELID3AQ96N28 172 aa4.2□□□□□ -1.74
ZNF440-201ENST00000304060 IGKV1-6A0A0C4DH72 117 aa4.2□□□□□ -1.74
ZNF440-201ENST00000304060 HSBP1O75506 76 aa4.2□□□□□ -1.74
ZNF440-201ENST00000304060 RNASEKQ6P5S7 137 aaKnown RBP4.2□□□□□ -1.74
ZNF440-201ENST00000304060 TRBV6-1A0A0K0K1D8 114 aa4.2□□□□□ -1.74
ZNF440-201ENST00000304060 LEPROTL1O95214 131 aa4.2□□□□□ -1.74
ZNF440-201ENST00000304060 APOMO95445 188 aa4.2□□□□□ -1.74
ZNF440-201ENST00000304060 CRYGAP11844 174 aa4.2□□□□□ -1.74
ZNF440-201ENST00000304060 C16orf74Q96GX8 76 aa4.2□□□□□ -1.74
ZNF440-201ENST00000304060 IGKV1-39P01597 117 aa4.19□□□□□ -1.74
ZNF440-201ENST00000304060 IGKV1D-39P04432 117 aa4.19□□□□□ -1.74
ZNF440-201ENST00000304060 HIST1H4AP62805 103 aaKnown RBP4.19□□□□□ -1.74
ZNF440-201ENST00000304060 NTN5Q8WTR8 489 aaPredicted RBP4.19□□□□□ -1.74
ZNF440-201ENST00000304060 LINC00526Q96FQ7 95 aa4.19□□□□□ -1.74
ZNF440-201ENST00000304060 Q9H8V8 135 aa4.19□□□□□ -1.74
ZNF440-201ENST00000304060 TRBV7-3A0A075B6L6 115 aa4.19□□□□□ -1.74
ZNF440-201ENST00000304060 A0A096LNJ9 63 aa4.19□□□□□ -1.74
ZNF440-201ENST00000304060 A0A0G2JRQ6 117 aa4.19□□□□□ -1.74
ZNF440-201ENST00000304060 RNASE4P34096 147 aaKnown RBP4.19□□□□□ -1.74
ZNF440-201ENST00000304060 PRR20EP86478 221 aa4.19□□□□□ -1.74
ZNF440-201ENST00000304060 PRR20CP86479 221 aa4.19□□□□□ -1.74
ZNF440-201ENST00000304060 PRR20DP86480 221 aa4.19□□□□□ -1.74
ZNF440-201ENST00000304060 PRR20BP86481 221 aa4.19□□□□□ -1.74
ZNF440-201ENST00000304060 PRR20AP86496 221 aa4.19□□□□□ -1.74
ZNF440-201ENST00000304060 Q5XG85 94 aa4.19□□□□□ -1.74
ZNF440-201ENST00000304060 MIC13Q5XKP0 118 aa4.19□□□□□ -1.74
ZNF440-201ENST00000304060 ZNF492Q9P255 531 aa4.19□□□□□ -1.74
ZNF440-201ENST00000304060 DKK2Q9UBU2 259 aa4.19□□□□□ -1.74
ZNF440-201ENST00000304060 OR13C6PQ8NH95 151 aa4.19□□□□□ -1.74
ZNF440-201ENST00000304060 PAX4O43316 350 aa4.18□□□□□ -1.74
ZNF440-201ENST00000304060 FXYD7P58549 80 aa4.18□□□□□ -1.74
ZNF440-201ENST00000304060 WT1-ASQ06250 92 aa4.18□□□□□ -1.74
ZNF440-201ENST00000304060 FAM19A5Q7Z5A7 132 aaPredicted RBP4.18□□□□□ -1.74
ZNF440-201ENST00000304060 RAB37Q96AX2 223 aa4.18□□□□□ -1.74
ZNF440-201ENST00000304060 SLC25A2Q9BXI2 301 aa4.18□□□□□ -1.74
ZNF440-201ENST00000304060 SCO2A0A1W2PP80 73 aa4.18□□□□□ -1.74
ZNF440-201ENST00000304060 RS1O15537 224 aa4.18□□□□□ -1.74
ZNF440-201ENST00000304060 CTSGP08311 255 aa4.18□□□□□ -1.74
ZNF440-201ENST00000304060 SEC61GP60059 68 aa4.18□□□□□ -1.74
ZNF440-201ENST00000304060 DEFB104AQ8WTQ1 72 aa4.18□□□□□ -1.74
ZNF440-201ENST00000304060 ICOSQ9Y6W8 199 aa4.18□□□□□ -1.74
ZNF440-201ENST00000304060 LINC00205P59089 165 aa4.18□□□□□ -1.74
ZNF440-201ENST00000304060 Q6ZR54 194 aa4.18□□□□□ -1.74
ZNF440-201ENST00000304060 ZNF503Q96F45 646 aa4.18□□□□□ -1.74
ZNF440-201ENST00000304060 SLC25A39Q9BZJ4 359 aaPredicted RBP4.18□□□□□ -1.74
ZNF440-201ENST00000304060 A0A1B0GVY2 172 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 RPL36AP83881 106 aaKnown RBP4.17□□□□□ -1.74
ZNF440-201ENST00000304060 PDE6HQ13956 83 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 KLK9Q2XQG4 91 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 ETDBQ3ZM63 59 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 IBA57Q5T440 356 aaKnown RBP4.17□□□□□ -1.74
ZNF440-201ENST00000304060 LCE2DQ5TA82 110 aaPredicted RBP4.17□□□□□ -1.74
ZNF440-201ENST00000304060 OR8A1Q8NGG7 326 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 RPL36ALQ969Q0 106 aaKnown RBP4.17□□□□□ -1.74
ZNF440-201ENST00000304060 KLK9Q9UKQ9 250 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 IGKV1-5P01602 117 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 ZNF138P52744 262 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 FXYD2P54710 66 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 SPINK13Q1W4C9 94 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 PRNTQ86SH4 94 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 KLF12Q9Y4X4 402 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 H3BMM0 161 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 MGPP08493 103 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 UBE2D1P51668 147 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 Q5VSD8 79 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 LYPD1Q8N2G4 141 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 ZNF331Q9NQX6 463 aaPredicted RBP4.17□□□□□ -1.74
ZNF440-201ENST00000304060 HHLA3Q9XRX5 114 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 TRBV20-1A0A075B6N2 111 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 IGLV5-52A0A0A0MRZ9 124 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 C9JAW5 83 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 ZNF56Q15929 161 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 LINC00173Q6ZV60 143 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 ZNF414Q96IQ9 312 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 ODF3Q96PU9 254 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 SHANK2-AS3Q9BTD1 123 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 OTORQ9NRC9 128 aa4.17□□□□□ -1.74
ZNF440-201ENST00000304060 C19orf71A6NCJ1 209 aa4.16□□□□□ -1.74
ZNF440-201ENST00000304060 SGK494Q96LW2 274 aa4.16□□□□□ -1.74
ZNF440-201ENST00000304060 TRAV12-3A0A0B4J271 114 aa4.16□□□□□ -1.74
ZNF440-201ENST00000304060 K7EIM0 57 aa4.16□□□□□ -1.74
ZNF440-201ENST00000304060 GOLT1AQ6ZVE7 132 aa4.16□□□□□ -1.74
ZNF440-201ENST00000304060 C3orf22Q8N5N4 141 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 193.7 ms