RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 HERVK_113P61574 105 aa13.54□□□□□ -0.24
RNF139-201ENST00000303545 IGLV4-3A0A075B6K6 122 aa13.53□□□□□ -0.24
RNF139-201ENST00000303545 IGLL5B9A064 214 aa13.53□□□□□ -0.24
RNF139-201ENST00000303545 A8MWV9 139 aa13.53□□□□□ -0.24
RNF139-201ENST00000303545 PLA2G2AP14555 144 aa13.53□□□□□ -0.24
RNF139-201ENST00000303545 TAL2Q16559 108 aa13.53□□□□□ -0.24
RNF139-201ENST00000303545 HECTD1Q9ULT8 2610 aa13.53□□□□□ -0.24
RNF139-201ENST00000303545 SFTA2Q6UW10 78 aa13.52□□□□□ -0.24
RNF139-201ENST00000303545 VCX2Q9H322 139 aa13.52□□□□□ -0.24
RNF139-201ENST00000303545 GCN1Q92616 2671 aaKnown RBP13.52□□□□□ -0.25
RNF139-201ENST00000303545 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.52□□□□□ -0.25
RNF139-201ENST00000303545 IGKV2-29A2NJV5 120 aaPredicted RBP13.52□□□□□ -0.25
RNF139-201ENST00000303545 TMEM238C9JI98 176 aa13.52□□□□□ -0.25
RNF139-201ENST00000303545 FHL3Q13643 280 aa13.52□□□□□ -0.25
RNF139-201ENST00000303545 PAPPA-AS1Q5QFB9 102 aa13.51□□□□□ -0.25
RNF139-201ENST00000303545 LINC01549A6NIU2 74 aa13.51□□□□□ -0.25
RNF139-201ENST00000303545 IGHV3-53P01767 116 aa13.51□□□□□ -0.25
RNF139-201ENST00000303545 C1orf158Q8N1D5 194 aa13.51□□□□□ -0.25
RNF139-201ENST00000303545 ZNF479Q96JC4 524 aa13.5□□□□□ -0.25
RNF139-201ENST00000303545 G3V4G9 280 aa13.5□□□□□ -0.25
RNF139-201ENST00000303545 FAM104AQ969W3 186 aa13.5□□□□□ -0.25
RNF139-201ENST00000303545 NOTCH2Q04721 2471 aa13.49□□□□□ -0.25
RNF139-201ENST00000303545 C2CD3Q4AC94 2353 aa13.49□□□□□ -0.25
RNF139-201ENST00000303545 TRGV1A0A0A0MS02 117 aa13.49□□□□□ -0.25
RNF139-201ENST00000303545 MTURNQ8N3F0 131 aa13.49□□□□□ -0.25
RNF139-201ENST00000303545 J3QKU1 62 aa13.49□□□□□ -0.25
RNF139-201ENST00000303545 J3QQQ9 107 aa13.49□□□□□ -0.25
RNF139-201ENST00000303545 KMT2BQ9UMN6 2715 aaPredicted RBP13.49□□□□□ -0.25
RNF139-201ENST00000303545 A0A0J9YY99 117 aa13.48□□□□□ -0.25
RNF139-201ENST00000303545 TSSC4Q9Y5U2 329 aaPredicted RBP13.48□□□□□ -0.25
RNF139-201ENST00000303545 APOMO95445 188 aa13.48□□□□□ -0.25
RNF139-201ENST00000303545 ZNF22P17026 224 aaPredicted RBP13.48□□□□□ -0.25
RNF139-201ENST00000303545 SPXQ9BT56 116 aa13.48□□□□□ -0.25
RNF139-201ENST00000303545 ADARB2-AS1A8MUL3 147 aa13.47□□□□□ -0.25
RNF139-201ENST00000303545 LGALS3P17931 250 aaKnown RBP13.47□□□□□ -0.25
RNF139-201ENST00000303545 TEX29Q8N6K0 151 aa13.47□□□□□ -0.25
RNF139-201ENST00000303545 RPL35AP18077 110 aaKnown RBP13.47□□□□□ -0.25
RNF139-201ENST00000303545 TMEM223A0PJW6 202 aa13.46□□□□□ -0.25
RNF139-201ENST00000303545 RHODO00212 210 aa13.46□□□□□ -0.25
RNF139-201ENST00000303545 NFE4Q86UQ8 179 aa13.46□□□□□ -0.25
RNF139-201ENST00000303545 LINC00467Q9BRT7 94 aa13.46□□□□□ -0.25
RNF139-201ENST00000303545 CHCHD7Q9BUK0 85 aa13.46□□□□□ -0.25
RNF139-201ENST00000303545 AMELXQ99217 191 aa13.46□□□□□ -0.25
RNF139-201ENST00000303545 Q6ZTI0 123 aa13.45□□□□□ -0.26
RNF139-201ENST00000303545 OR5A1Q8NGJ0 315 aa13.45□□□□□ -0.26
RNF139-201ENST00000303545 PGPEP1Q9NXJ5 209 aa13.45□□□□□ -0.26
RNF139-201ENST00000303545 H3BMG7 143 aa13.45□□□□□ -0.26
RNF139-201ENST00000303545 HIVEP2P31629 2446 aa13.45□□□□□ -0.26
RNF139-201ENST00000303545 TRAV8-3A0A0A6YYJ7 113 aa13.44□□□□□ -0.26
RNF139-201ENST00000303545 RNASE1P07998 156 aaKnown RBP13.44□□□□□ -0.26
RNF139-201ENST00000303545 RRN3P1Q2M238 152 aa13.44□□□□□ -0.26
RNF139-201ENST00000303545 TRAV25A0A0B4J276 109 aa13.44□□□□□ -0.26
RNF139-201ENST00000303545 A8MZ25 164 aa13.43□□□□□ -0.26
RNF139-201ENST00000303545 RS1O15537 224 aa13.43□□□□□ -0.26
RNF139-201ENST00000303545 EDA2RQ9HAV5 297 aa13.43□□□□□ -0.26
RNF139-201ENST00000303545 BEAN1Q3B7T3 259 aa13.43□□□□□ -0.26
RNF139-201ENST00000303545 Q6ZUT4 128 aa13.43□□□□□ -0.26
RNF139-201ENST00000303545 NOP10Q9NPE3 64 aaKnown RBP13.42□□□□□ -0.26
RNF139-201ENST00000303545 UBE2D4Q9Y2X8 147 aa13.42□□□□□ -0.26
RNF139-201ENST00000303545 LEPROTO15243 131 aa13.42□□□□□ -0.26
RNF139-201ENST00000303545 A0A1B0GWB2 263 aa13.41□□□□□ -0.26
RNF139-201ENST00000303545 RPL24P83731 157 aaKnown RBP13.41□□□□□ -0.26
RNF139-201ENST00000303545 VWFP04275 2813 aa13.41□□□□□ -0.26
RNF139-201ENST00000303545 FN1P02751 2386 aaKnown RBP13.4□□□□□ -0.26
RNF139-201ENST00000303545 IGHV3-30P01768 117 aa13.4□□□□□ -0.26
RNF139-201ENST00000303545 GIG44P09565 113 aaPredicted RBP13.4□□□□□ -0.26
RNF139-201ENST00000303545 IGHV3-30-5P0DP03 117 aa13.4□□□□□ -0.26
RNF139-201ENST00000303545 SLC25A29Q8N8R3 303 aa13.4□□□□□ -0.26
RNF139-201ENST00000303545 PYGO1Q9Y3Y4 419 aa13.4□□□□□ -0.26
RNF139-201ENST00000303545 WFDC2Q14508 124 aa13.4□□□□□ -0.26
RNF139-201ENST00000303545 SPINK8P0C7L1 97 aa13.39□□□□□ -0.27
RNF139-201ENST00000303545 C16orf95Q9H693 158 aa13.39□□□□□ -0.27
RNF139-201ENST00000303545 LOC107984156A0A0G2JMH3 177 aa13.39□□□□□ -0.27
RNF139-201ENST00000303545 TMEM238LA0A1B0GVL6 79 aa13.39□□□□□ -0.27
RNF139-201ENST00000303545 A6NJY4 79 aa13.39□□□□□ -0.27
RNF139-201ENST00000303545 IGHV3-30-3P0DP02 117 aa13.39□□□□□ -0.27
RNF139-201ENST00000303545 PIK3CD-AS1Q5SR53 167 aa13.39□□□□□ -0.27
RNF139-201ENST00000303545 ARL17AQ8IVW1 177 aa13.39□□□□□ -0.27
RNF139-201ENST00000303545 ZNF418Q8TF45 676 aaPredicted RBP13.39□□□□□ -0.27
RNF139-201ENST00000303545 NBEAL2Q6ZNJ1 2754 aa13.38□□□□□ -0.27
RNF139-201ENST00000303545 TSPAN13O95857 204 aa13.38□□□□□ -0.27
RNF139-201ENST00000303545 UBE2D1P51668 147 aa13.38□□□□□ -0.27
RNF139-201ENST00000303545 C10orf126Q8N4M7 172 aa13.38□□□□□ -0.27
RNF139-201ENST00000303545 PTH2Q96A98 100 aa13.38□□□□□ -0.27
RNF139-201ENST00000303545 TIMM21Q9BVV7 248 aa13.38□□□□□ -0.27
RNF139-201ENST00000303545 NDUFA7O95182 113 aa13.37□□□□□ -0.27
RNF139-201ENST00000303545 OTOGQ6ZRI0 2925 aa13.37□□□□□ -0.27
RNF139-201ENST00000303545 GAGE12JA6NER3 117 aa13.37□□□□□ -0.27
RNF139-201ENST00000303545 CFC1BP0CG36 223 aa13.37□□□□□ -0.27
RNF139-201ENST00000303545 CFC1P0CG37 223 aa13.37□□□□□ -0.27
RNF139-201ENST00000303545 MRPS36P82909 103 aaKnown RBP13.37□□□□□ -0.27
RNF139-201ENST00000303545 GAGE4Q13068 117 aa13.37□□□□□ -0.27
RNF139-201ENST00000303545 GAGE5Q13069 117 aa13.37□□□□□ -0.27
RNF139-201ENST00000303545 GAGE13Q4V321 117 aa13.37□□□□□ -0.27
RNF139-201ENST00000303545 LINC00694P0DN24 101 aa13.36□□□□□ -0.27
RNF139-201ENST00000303545 KRTAP10-3P60369 221 aa13.36□□□□□ -0.27
RNF139-201ENST00000303545 NDUFA11Q86Y39 141 aa13.36□□□□□ -0.27
RNF139-201ENST00000303545 IL17DQ8TAD2 202 aa13.36□□□□□ -0.27
RNF139-201ENST00000303545 CLUHP3Q96NS8 147 aa13.36□□□□□ -0.27
RNF139-201ENST00000303545 GAGE7O76087 117 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms