RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 RNF183Q96D59 192 aa5.83□□□□□ -1.48
SF3B3-201ENST00000302516 CHD8Q9HCK8 2581 aa5.82□□□□□ -1.48
SF3B3-201ENST00000302516 IGKV1D-37A0A075B6S9 117 aa5.82□□□□□ -1.48
SF3B3-201ENST00000302516 IGLV2-8P01709 118 aa5.82□□□□□ -1.48
SF3B3-201ENST00000302516 IGHV4-28A0A0C4DH34 117 aa5.82□□□□□ -1.48
SF3B3-201ENST00000302516 BPY2O14599 106 aa5.82□□□□□ -1.48
SF3B3-201ENST00000302516 DEFB136Q30KP8 78 aa5.82□□□□□ -1.48
SF3B3-201ENST00000302516 TMEM223A0PJW6 202 aa5.82□□□□□ -1.48
SF3B3-201ENST00000302516 ZFAND2AQ8N6M9 145 aa5.82□□□□□ -1.48
SF3B3-201ENST00000302516 MLST8Q9BVC4 326 aa5.82□□□□□ -1.48
SF3B3-201ENST00000302516 MT-ATP8P03928 68 aa5.82□□□□□ -1.48
SF3B3-201ENST00000302516 IGLV10-54A0A075B6I4 117 aa5.82□□□□□ -1.48
SF3B3-201ENST00000302516 IGHV4OR15-8A0A075B7B6 117 aa5.82□□□□□ -1.48
SF3B3-201ENST00000302516 A0A087WW49 117 aa5.82□□□□□ -1.48
SF3B3-201ENST00000302516 PRAC2D3DTV9 90 aa5.82□□□□□ -1.48
SF3B3-201ENST00000302516 CLPSL1A2RUU4 121 aa5.82□□□□□ -1.48
SF3B3-201ENST00000302516 ODF3BA8MYP8 253 aa5.82□□□□□ -1.48
SF3B3-201ENST00000302516 WT1P19544 449 aaPredicted RBP5.82□□□□□ -1.48
SF3B3-201ENST00000302516 MRPS36P82909 103 aaKnown RBP5.82□□□□□ -1.48
SF3B3-201ENST00000302516 MRPL55Q7Z7F7 128 aaKnown RBP5.82□□□□□ -1.48
SF3B3-201ENST00000302516 MYCNOSP40205 109 aa5.81□□□□□ -1.48
SF3B3-201ENST00000302516 DAZAP2Q15038 168 aaPredicted RBP5.81□□□□□ -1.48
SF3B3-201ENST00000302516 SPRNQ5BIV9 151 aa5.81□□□□□ -1.48
SF3B3-201ENST00000302516 FANCD2OSQ96PS1 177 aa5.81□□□□□ -1.48
SF3B3-201ENST00000302516 SMIM9A6NGZ8 99 aa5.81□□□□□ -1.48
SF3B3-201ENST00000302516 IGHV4-38-2P0DP08 117 aa5.81□□□□□ -1.48
SF3B3-201ENST00000302516 FAM110AQ9BQ89 295 aa5.81□□□□□ -1.48
SF3B3-201ENST00000302516 DEFB113Q30KQ7 82 aa5.81□□□□□ -1.48
SF3B3-201ENST00000302516 SEM1Q6ZVN7 128 aa5.81□□□□□ -1.48
SF3B3-201ENST00000302516 MBD6Q96DN6 1003 aa5.81□□□□□ -1.48
SF3B3-201ENST00000302516 EIF4EBP1Q13541 118 aaPredicted RBP5.81□□□□□ -1.48
SF3B3-201ENST00000302516 Q9HAA7 133 aa5.81□□□□□ -1.48
SF3B3-201ENST00000302516 MUC7Q8TAX7 377 aa5.81□□□□□ -1.48
SF3B3-201ENST00000302516 PTPN13Q12923 2485 aa5.8□□□□□ -1.48
SF3B3-201ENST00000302516 TRAV23DV6A0A075B6W5 121 aa5.8□□□□□ -1.48
SF3B3-201ENST00000302516 FBXL19-AS1Q494R0 122 aa5.8□□□□□ -1.48
SF3B3-201ENST00000302516 SERP2Q8N6R1 65 aa5.8□□□□□ -1.48
SF3B3-201ENST00000302516 MAPK1IP1LQ8NDC0 245 aa5.8□□□□□ -1.48
SF3B3-201ENST00000302516 PRO0255Q9UI72 69 aa5.8□□□□□ -1.48
SF3B3-201ENST00000302516 LRRK2Q5S007 2527 aa5.8□□□□□ -1.48
SF3B3-201ENST00000302516 PYGO1Q9Y3Y4 419 aa5.79□□□□□ -1.48
SF3B3-201ENST00000302516 LYRM9A8MSI8 78 aa5.79□□□□□ -1.48
SF3B3-201ENST00000302516 CCDC140Q96MF4 163 aa5.79□□□□□ -1.48
SF3B3-201ENST00000302516 C4orf48Q5BLP8 95 aa5.79□□□□□ -1.48
SF3B3-201ENST00000302516 SIRPDQ9H106 197 aa5.79□□□□□ -1.48
SF3B3-201ENST00000302516 ZFYVE26Q68DK2 2539 aa5.79□□□□□ -1.48
SF3B3-201ENST00000302516 TECTAO75443 2155 aa5.79□□□□□ -1.48
SF3B3-201ENST00000302516 SVIPQ8NHG7 77 aa5.79□□□□□ -1.48
SF3B3-201ENST00000302516 GDF5OSQ5U4N7 250 aa5.79□□□□□ -1.48
SF3B3-201ENST00000302516 HIVEP3Q5T1R4 2406 aa5.79□□□□□ -1.48
SF3B3-201ENST00000302516 IGHV3-30P01768 117 aa5.79□□□□□ -1.48
SF3B3-201ENST00000302516 IGHV3-33P01772 117 aa5.79□□□□□ -1.48
SF3B3-201ENST00000302516 IGHV3-30-5P0DP03 117 aa5.79□□□□□ -1.48
SF3B3-201ENST00000302516 TRIAP1O43715 76 aa5.79□□□□□ -1.48
SF3B3-201ENST00000302516 COX17Q14061 63 aa5.79□□□□□ -1.48
SF3B3-201ENST00000302516 SDIM1Q6ZPB5 146 aa5.79□□□□□ -1.48
SF3B3-201ENST00000302516 TTTY13Q9BZ97 58 aa5.79□□□□□ -1.48
SF3B3-201ENST00000302516 OTOGLQ3ZCN5 2332 aa5.79□□□□□ -1.48
SF3B3-201ENST00000302516 F8W735 103 aaPredicted RBP5.78□□□□□ -1.48
SF3B3-201ENST00000302516 IGHV4-61A0A0C4DH41 118 aa5.78□□□□□ -1.48
SF3B3-201ENST00000302516 H0Y9J4 135 aa5.78□□□□□ -1.48
SF3B3-201ENST00000302516 LINC00308Q8TCZ7 52 aa5.78□□□□□ -1.48
SF3B3-201ENST00000302516 HIVEP2P31629 2446 aa5.78□□□□□ -1.48
SF3B3-201ENST00000302516 Q6Q795 121 aa5.78□□□□□ -1.48
SF3B3-201ENST00000302516 Q8N7P7 452 aa5.78□□□□□ -1.48
SF3B3-201ENST00000302516 PTH2Q96A98 100 aa5.78□□□□□ -1.48
SF3B3-201ENST00000302516 RBX1P62877 108 aa5.78□□□□□ -1.48
SF3B3-201ENST00000302516 MAP6D1Q9H9H5 199 aa5.78□□□□□ -1.48
SF3B3-201ENST00000302516 BLCAPP62952 87 aa5.78□□□□□ -1.48
SF3B3-201ENST00000302516 K7ERS5 55 aa5.77□□□□□ -1.49
SF3B3-201ENST00000302516 IGKV2D-26A0A0A0MRZ7 120 aa5.77□□□□□ -1.49
SF3B3-201ENST00000302516 USP17L23D6RBM5 183 aa5.77□□□□□ -1.49
SF3B3-201ENST00000302516 MYO9AB2RTY4 2548 aa5.77□□□□□ -1.49
SF3B3-201ENST00000302516 E7EUB6 86 aa5.77□□□□□ -1.49
SF3B3-201ENST00000302516 J3QKU1 62 aa5.77□□□□□ -1.49
SF3B3-201ENST00000302516 ZNF22P17026 224 aaPredicted RBP5.77□□□□□ -1.49
SF3B3-201ENST00000302516 PIK3CD-AS1Q5SR53 167 aa5.77□□□□□ -1.49
SF3B3-201ENST00000302516 LRRC75A-AS1Q8N1F1 130 aa5.77□□□□□ -1.49
SF3B3-201ENST00000302516 DOPEY1Q5JWR5 2465 aa5.77□□□□□ -1.49
SF3B3-201ENST00000302516 A6NDX4 124 aa5.77□□□□□ -1.49
SF3B3-201ENST00000302516 IGF1P05019 195 aa5.77□□□□□ -1.49
SF3B3-201ENST00000302516 IGKV4-1P06312 121 aa5.77□□□□□ -1.49
SF3B3-201ENST00000302516 IGLV4-3A0A075B6K6 122 aa5.76□□□□□ -1.49
SF3B3-201ENST00000302516 ZNF295-AS1Q8N0V1 137 aa5.76□□□□□ -1.49
SF3B3-201ENST00000302516 IL17DQ8TAD2 202 aa5.76□□□□□ -1.49
SF3B3-201ENST00000302516 IGHV4-30-2A0A087WSY4 118 aa5.76□□□□□ -1.49
SF3B3-201ENST00000302516 TRBV27A0A0K0K1C4 114 aa5.76□□□□□ -1.49
SF3B3-201ENST00000302516 KLK5Q9Y337 293 aaPredicted RBP5.76□□□□□ -1.49
SF3B3-201ENST00000302516 REG3AQ06141 175 aa5.76□□□□□ -1.49
SF3B3-201ENST00000302516 CFAP126Q5VTH2 177 aa5.76□□□□□ -1.49
SF3B3-201ENST00000302516 LINC00467Q9BRT7 94 aa5.76□□□□□ -1.49
SF3B3-201ENST00000302516 FRMD6-AS1P0C7T7 363 aa5.76□□□□□ -1.49
SF3B3-201ENST00000302516 DHRS4-AS1Q9P1J3 65 aa5.76□□□□□ -1.49
SF3B3-201ENST00000302516 TRBV6-5A0A0K0K1A5 114 aa5.76□□□□□ -1.49
SF3B3-201ENST00000302516 M0QY20 66 aa5.76□□□□□ -1.49
SF3B3-201ENST00000302516 LST1O00453 97 aa5.76□□□□□ -1.49
SF3B3-201ENST00000302516 SPRY2O43597 315 aa5.76□□□□□ -1.49
SF3B3-201ENST00000302516 ZFP36P26651 326 aaKnown RBP5.76□□□□□ -1.49
SF3B3-201ENST00000302516 ENHOQ6UWT2 76 aa5.76□□□□□ -1.49
SF3B3-201ENST00000302516 LOXL1Q08397 574 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms