RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 PRM2P04554 102 aa10.21□□□□□ -0.78
CHRFAM7A-201ENST00000299847 LINC00526Q96FQ7 95 aa10.21□□□□□ -0.78
CHRFAM7A-201ENST00000299847 A8MZ25 164 aa10.2□□□□□ -0.78
CHRFAM7A-201ENST00000299847 TRBV10-1A0A0K0K1A3 114 aa10.2□□□□□ -0.78
CHRFAM7A-201ENST00000299847 BRWD1-AS2P59051 145 aa10.2□□□□□ -0.78
CHRFAM7A-201ENST00000299847 XAGE1AQ9HD64 81 aa10.2□□□□□ -0.78
CHRFAM7A-201ENST00000299847 KIAA1549LQ6ZVL6 1849 aa10.19□□□□□ -0.78
CHRFAM7A-201ENST00000299847 M0R2N4 97 aa10.19□□□□□ -0.78
CHRFAM7A-201ENST00000299847 C11orf1Q9H5F2 150 aa10.19□□□□□ -0.78
CHRFAM7A-201ENST00000299847 NOTCH3Q9UM47 2321 aa10.19□□□□□ -0.78
CHRFAM7A-201ENST00000299847 IGLV2-18A0A075B6J9 118 aa10.19□□□□□ -0.78
CHRFAM7A-201ENST00000299847 WFDC10BQ8IUB3 73 aa10.19□□□□□ -0.78
CHRFAM7A-201ENST00000299847 ODF3BA8MYP8 253 aa10.19□□□□□ -0.78
CHRFAM7A-201ENST00000299847 NEXN-AS1Q8NBZ9 246 aa10.19□□□□□ -0.78
CHRFAM7A-201ENST00000299847 LMO4P61968 165 aa10.19□□□□□ -0.78
CHRFAM7A-201ENST00000299847 SPTSSBQ8NFR3 76 aa10.19□□□□□ -0.78
CHRFAM7A-201ENST00000299847 DEFB131BA0A096LNP1 70 aa10.18□□□□□ -0.78
CHRFAM7A-201ENST00000299847 C18orf65Q6ZTR6 163 aa10.18□□□□□ -0.78
CHRFAM7A-201ENST00000299847 CDKN2A-AS1Q9UH64 79 aa10.18□□□□□ -0.78
CHRFAM7A-201ENST00000299847 SPRY4Q9C004 299 aa10.18□□□□□ -0.78
CHRFAM7A-201ENST00000299847 DSCAML1Q8TD84 2053 aa10.18□□□□□ -0.78
CHRFAM7A-201ENST00000299847 TMEM131Q92545 1883 aa10.17□□□□□ -0.78
CHRFAM7A-201ENST00000299847 Q6YL49 198 aa10.17□□□□□ -0.78
CHRFAM7A-201ENST00000299847 J3KT08 172 aa10.17□□□□□ -0.78
CHRFAM7A-201ENST00000299847 SEC61GP60059 68 aa10.17□□□□□ -0.78
CHRFAM7A-201ENST00000299847 WFDC10AQ9H1F0 79 aa10.17□□□□□ -0.78
CHRFAM7A-201ENST00000299847 BPY2O14599 106 aa10.17□□□□□ -0.78
CHRFAM7A-201ENST00000299847 PLCE1Q9P212 2302 aa10.17□□□□□ -0.78
CHRFAM7A-201ENST00000299847 PPDPFQ9H3Y8 114 aa10.17□□□□□ -0.78
CHRFAM7A-201ENST00000299847 NDUFC2O95298 119 aa10.16□□□□□ -0.78
CHRFAM7A-201ENST00000299847 ENHOQ6UWT2 76 aa10.16□□□□□ -0.78
CHRFAM7A-201ENST00000299847 SHANK1Q9Y566 2161 aa10.16□□□□□ -0.78
CHRFAM7A-201ENST00000299847 MT-ATP8P03928 68 aa10.16□□□□□ -0.78
CHRFAM7A-201ENST00000299847 DEFB114Q30KQ6 69 aa10.16□□□□□ -0.78
CHRFAM7A-201ENST00000299847 A0A1B0GXF2 115 aa10.16□□□□□ -0.78
CHRFAM7A-201ENST00000299847 TNFRSF13BO14836 293 aaPredicted RBP10.16□□□□□ -0.78
CHRFAM7A-201ENST00000299847 MAPKAPK5-AS1Q8N8E1 139 aa10.16□□□□□ -0.78
CHRFAM7A-201ENST00000299847 IGKV2-28A0A075B6P5 120 aa10.15□□□□□ -0.78
CHRFAM7A-201ENST00000299847 TMEM89A2RUT3 159 aa10.15□□□□□ -0.78
CHRFAM7A-201ENST00000299847 IGKV2D-28P01615 120 aa10.15□□□□□ -0.78
CHRFAM7A-201ENST00000299847 LOC100131303A0A0U1RQF7 123 aa10.15□□□□□ -0.78
CHRFAM7A-201ENST00000299847 Q8N976 141 aa10.15□□□□□ -0.78
CHRFAM7A-201ENST00000299847 RIF1Q5UIP0 2472 aaKnown RBP10.15□□□□□ -0.79
CHRFAM7A-201ENST00000299847 H3BQ85 93 aa10.15□□□□□ -0.79
CHRFAM7A-201ENST00000299847 NBASA2RRP1 2371 aa10.15□□□□□ -0.79
CHRFAM7A-201ENST00000299847 H3BT86 120 aa10.14□□□□□ -0.79
CHRFAM7A-201ENST00000299847 CFAP126Q5VTH2 177 aa10.14□□□□□ -0.79
CHRFAM7A-201ENST00000299847 CRIP1P50238 77 aa10.14□□□□□ -0.79
CHRFAM7A-201ENST00000299847 PRORYQ9H606 182 aa10.14□□□□□ -0.79
CHRFAM7A-201ENST00000299847 NUP210LQ5VU65 1888 aa10.14□□□□□ -0.79
CHRFAM7A-201ENST00000299847 C3orf84H3BNL1 204 aa10.14□□□□□ -0.79
CHRFAM7A-201ENST00000299847 CASC2Q6XLA1 102 aa10.14□□□□□ -0.79
CHRFAM7A-201ENST00000299847 SPTAN1Q13813 2472 aaKnown RBP10.14□□□□□ -0.79
CHRFAM7A-201ENST00000299847 TMEM223A0PJW6 202 aa10.14□□□□□ -0.79
CHRFAM7A-201ENST00000299847 ZNF295-AS1Q8N0V1 137 aa10.14□□□□□ -0.79
CHRFAM7A-201ENST00000299847 UFSP1Q6NVU6 142 aa10.14□□□□□ -0.79
CHRFAM7A-201ENST00000299847 IGLV4-3A0A075B6K6 122 aa10.13□□□□□ -0.79
CHRFAM7A-201ENST00000299847 TANC2Q9HCD6 1990 aa10.13□□□□□ -0.79
CHRFAM7A-201ENST00000299847 BBC3Q96PG8 261 aaPredicted RBP10.13□□□□□ -0.79
CHRFAM7A-201ENST00000299847 P0C879 139 aa10.13□□□□□ -0.79
CHRFAM7A-201ENST00000299847 INSL3P51460 131 aa10.12□□□□□ -0.79
CHRFAM7A-201ENST00000299847 IGLC6P0CF74 106 aa10.12□□□□□ -0.79
CHRFAM7A-201ENST00000299847 NCOA6Q14686 2063 aaPredicted RBP10.12□□□□□ -0.79
CHRFAM7A-201ENST00000299847 ZNF22P17026 224 aaPredicted RBP10.12□□□□□ -0.79
CHRFAM7A-201ENST00000299847 C20orf197Q8N268 126 aa10.12□□□□□ -0.79
CHRFAM7A-201ENST00000299847 SPANXCQ9NY87 97 aa10.12□□□□□ -0.79
CHRFAM7A-201ENST00000299847 K7EQG2 157 aa10.12□□□□□ -0.79
CHRFAM7A-201ENST00000299847 C1orf158Q8N1D5 194 aa10.12□□□□□ -0.79
CHRFAM7A-201ENST00000299847 SPINK6Q6UWN8 80 aa10.11□□□□□ -0.79
CHRFAM7A-201ENST00000299847 HILS1P60008 231 aa10.11□□□□□ -0.79
CHRFAM7A-201ENST00000299847 TRIAP1O43715 76 aa10.1□□□□□ -0.79
CHRFAM7A-201ENST00000299847 NDUFV3P56181 108 aaKnown RBP10.1□□□□□ -0.79
CHRFAM7A-201ENST00000299847 PCNX2A6NKB5 2137 aa10.1□□□□□ -0.79
CHRFAM7A-201ENST00000299847 RPL37AP8A6NKH3 93 aa10.1□□□□□ -0.79
CHRFAM7A-201ENST00000299847 CRIP3Q6Q6R5 217 aa10.1□□□□□ -0.79
CHRFAM7A-201ENST00000299847 Q6ZSV7 163 aa10.1□□□□□ -0.79
CHRFAM7A-201ENST00000299847 Q6ZS46 218 aa10.1□□□□□ -0.79
CHRFAM7A-201ENST00000299847 MED13LQ71F56 2210 aa10.1□□□□□ -0.79
CHRFAM7A-201ENST00000299847 RNF185Q96GF1 192 aa10.09□□□□□ -0.79
CHRFAM7A-201ENST00000299847 LINC00308Q8TCZ7 52 aa10.09□□□□□ -0.79
CHRFAM7A-201ENST00000299847 KIAA1549Q9HCM3 1950 aa10.09□□□□□ -0.79
CHRFAM7A-201ENST00000299847 FBXL19-AS1Q494R0 122 aa10.09□□□□□ -0.79
CHRFAM7A-201ENST00000299847 TRBV6-8A0A0A6YYG3 113 aa10.08□□□□□ -0.8
CHRFAM7A-201ENST00000299847 A0A0U1RQV1 116 aa10.08□□□□□ -0.8
CHRFAM7A-201ENST00000299847 LY6G6DO95868 133 aa10.08□□□□□ -0.8
CHRFAM7A-201ENST00000299847 ZFAND3Q9H8U3 227 aa10.08□□□□□ -0.8
CHRFAM7A-201ENST00000299847 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.08□□□□□ -0.8
CHRFAM7A-201ENST00000299847 MBD6Q96DN6 1003 aa10.08□□□□□ -0.8
CHRFAM7A-201ENST00000299847 LYRM9A8MSI8 78 aa10.08□□□□□ -0.8
CHRFAM7A-201ENST00000299847 M0QY20 66 aa10.08□□□□□ -0.8
CHRFAM7A-201ENST00000299847 IGHV4-30-4P0DP06 118 aa10.08□□□□□ -0.8
CHRFAM7A-201ENST00000299847 LINC00643Q86TS7 51 aa10.08□□□□□ -0.8
CHRFAM7A-201ENST00000299847 C14orf177Q52M58 125 aa10.08□□□□□ -0.8
CHRFAM7A-201ENST00000299847 USP17L23D6RBM5 183 aa10.07□□□□□ -0.8
CHRFAM7A-201ENST00000299847 PRR9Q5T870 116 aa10.07□□□□□ -0.8
CHRFAM7A-201ENST00000299847 CLUHP3Q96NS8 147 aa10.07□□□□□ -0.8
CHRFAM7A-201ENST00000299847 SNURFQ9Y675 71 aa10.07□□□□□ -0.8
CHRFAM7A-201ENST00000299847 C6orf99Q4VX62 202 aa10.07□□□□□ -0.8
CHRFAM7A-201ENST00000299847 EDN2P20800 178 aa10.06□□□□□ -0.8
CHRFAM7A-201ENST00000299847 PRR4Q16378 134 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms