RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 C11orf44Q8N8P7 122 aa4.95□□□□□ -1.62
TMC1-201ENST00000297784 ODF3Q96PU9 254 aa4.95□□□□□ -1.62
TMC1-201ENST00000297784 IGKV3D-20A0A0C4DH25 116 aa4.95□□□□□ -1.62
TMC1-201ENST00000297784 IGHV7-4-1A0A0J9YVY3 117 aa4.95□□□□□ -1.62
TMC1-201ENST00000297784 J3KRW8 73 aa4.95□□□□□ -1.62
TMC1-201ENST00000297784 NDUFA7O95182 113 aa4.95□□□□□ -1.62
TMC1-201ENST00000297784 FAM159AQ6UWV7 190 aa4.95□□□□□ -1.62
TMC1-201ENST00000297784 Q8N1Y9 231 aa4.95□□□□□ -1.62
TMC1-201ENST00000297784 SLC25A29Q8N8R3 303 aa4.95□□□□□ -1.62
TMC1-201ENST00000297784 DUX3Q96PT4 197 aa4.95□□□□□ -1.62
TMC1-201ENST00000297784 PKD1L1Q8TDX9 2849 aa4.95□□□□□ -1.62
TMC1-201ENST00000297784 ADARB2-AS1A8MUL3 147 aa4.95□□□□□ -1.62
TMC1-201ENST00000297784 HERVK_113P61574 105 aa4.95□□□□□ -1.62
TMC1-201ENST00000297784 A0A0B4J2C4 111 aa4.94□□□□□ -1.62
TMC1-201ENST00000297784 C4orf3Q8WVX3 66 aa4.94□□□□□ -1.62
TMC1-201ENST00000297784 CITED2Q99967 270 aaPredicted RBP4.94□□□□□ -1.62
TMC1-201ENST00000297784 WNK1Q9H4A3 2382 aa4.94□□□□□ -1.62
TMC1-201ENST00000297784 TRAV8-4A0A0B4J246 113 aa4.94□□□□□ -1.62
TMC1-201ENST00000297784 C9JAW5 83 aa4.94□□□□□ -1.62
TMC1-201ENST00000297784 HOXD3P31249 432 aaPredicted RBP4.94□□□□□ -1.62
TMC1-201ENST00000297784 IGFL4Q6B9Z1 124 aa4.94□□□□□ -1.62
TMC1-201ENST00000297784 SFTA2Q6UW10 78 aa4.94□□□□□ -1.62
TMC1-201ENST00000297784 SPANXDQ9BXN6 97 aa4.94□□□□□ -1.62
TMC1-201ENST00000297784 FAM240AA0A1B0GVK7 77 aa4.93□□□□□ -1.62
TMC1-201ENST00000297784 M0R381 172 aa4.93□□□□□ -1.62
TMC1-201ENST00000297784 SCGB2A1O75556 95 aa4.93□□□□□ -1.62
TMC1-201ENST00000297784 IGHV3-33P01772 117 aa4.93□□□□□ -1.62
TMC1-201ENST00000297784 SLURP1P55000 103 aa4.93□□□□□ -1.62
TMC1-201ENST00000297784 SUMO2P61956 95 aaKnown RBP4.93□□□□□ -1.62
TMC1-201ENST00000297784 MEIG1Q5JSS6 88 aa4.93□□□□□ -1.62
TMC1-201ENST00000297784 C15orf53Q8NAA6 179 aa4.93□□□□□ -1.62
TMC1-201ENST00000297784 TRAV26-2A0A0B4J265 109 aa4.93□□□□□ -1.62
TMC1-201ENST00000297784 SYNJ2BPP57105 145 aa4.93□□□□□ -1.62
TMC1-201ENST00000297784 ATXN8Q156A1 80 aa4.93□□□□□ -1.62
TMC1-201ENST00000297784 ANXA2RQ3ZCQ2 193 aa4.93□□□□□ -1.62
TMC1-201ENST00000297784 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.93□□□□□ -1.62
TMC1-201ENST00000297784 NTN5Q8WTR8 489 aaPredicted RBP4.93□□□□□ -1.62
TMC1-201ENST00000297784 TMEM263Q8WUH6 116 aaKnown RBP4.93□□□□□ -1.62
TMC1-201ENST00000297784 METTL26Q96S19 204 aa4.93□□□□□ -1.62
TMC1-201ENST00000297784 DAZ1Q9NQZ3 744 aaKnown RBP4.93□□□□□ -1.62
TMC1-201ENST00000297784 TRBV7-7A0A0K0K1E9 115 aa4.93□□□□□ -1.62
TMC1-201ENST00000297784 TRBV10-2A0A0K0K1G8 114 aa4.93□□□□□ -1.62
TMC1-201ENST00000297784 K7EMT4 169 aa4.93□□□□□ -1.62
TMC1-201ENST00000297784 LGALS9O00182 355 aa4.93□□□□□ -1.62
TMC1-201ENST00000297784 C2orf66Q6UXQ4 117 aa4.93□□□□□ -1.62
TMC1-201ENST00000297784 AMELXQ99217 191 aa4.93□□□□□ -1.62
TMC1-201ENST00000297784 LINC01587Q99440 93 aa4.93□□□□□ -1.62
TMC1-201ENST00000297784 C11orf21Q9P2W6 132 aa4.93□□□□□ -1.62
TMC1-201ENST00000297784 DNAH3Q8TD57 4116 aa4.92□□□□□ -1.62
TMC1-201ENST00000297784 IGLV4-69A0A075B6H9 119 aa4.92□□□□□ -1.62
TMC1-201ENST00000297784 C11orf86A6NJI1 115 aa4.92□□□□□ -1.62
TMC1-201ENST00000297784 CRYGDP07320 174 aa4.92□□□□□ -1.62
TMC1-201ENST00000297784 LINC01620Q4KN68 170 aa4.92□□□□□ -1.62
TMC1-201ENST00000297784 DEFB121Q5J5C9 76 aa4.92□□□□□ -1.62
TMC1-201ENST00000297784 Q6ZQT7 251 aa4.92□□□□□ -1.62
TMC1-201ENST00000297784 KLHL30-AS1Q8NEE0 82 aa4.92□□□□□ -1.62
TMC1-201ENST00000297784 MRPL53Q96EL3 112 aaKnown RBP4.92□□□□□ -1.62
TMC1-201ENST00000297784 SOCS3O14543 225 aa4.92□□□□□ -1.62
TMC1-201ENST00000297784 RHPN1-AS1Q9BWJ2 59 aa4.92□□□□□ -1.62
TMC1-201ENST00000297784 A0A1W2PRX2 142 aa4.91□□□□□ -1.62
TMC1-201ENST00000297784 PPP1R17O96001 155 aa4.91□□□□□ -1.62
TMC1-201ENST00000297784 RNF182Q8N6D2 247 aa4.91□□□□□ -1.62
TMC1-201ENST00000297784 TRAV2A0A0B4J234 112 aa4.91□□□□□ -1.62
TMC1-201ENST00000297784 TRBV30A0A0K0K1B3 111 aa4.91□□□□□ -1.62
TMC1-201ENST00000297784 H3BMM0 161 aa4.91□□□□□ -1.62
TMC1-201ENST00000297784 DUSP14O95147 198 aaKnown RBP4.91□□□□□ -1.62
TMC1-201ENST00000297784 SPANXN1Q5VSR9 72 aa4.91□□□□□ -1.62
TMC1-201ENST00000297784 TRPT1Q86TN4 253 aaKnown RBP4.91□□□□□ -1.62
TMC1-201ENST00000297784 POM121L12Q8N7R1 296 aa4.91□□□□□ -1.62
TMC1-201ENST00000297784 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.91□□□□□ -1.62
TMC1-201ENST00000297784 UBE2WQ96B02 151 aa4.91□□□□□ -1.62
TMC1-201ENST00000297784 SORL1Q92673 2214 aa4.91□□□□□ -1.62
TMC1-201ENST00000297784 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.91□□□□□ -1.62
TMC1-201ENST00000297784 PRAC2D3DTV9 90 aa4.91□□□□□ -1.62
TMC1-201ENST00000297784 EIF4EBP3O60516 100 aaPredicted RBP4.91□□□□□ -1.62
TMC1-201ENST00000297784 TMEM141Q96I45 108 aa4.91□□□□□ -1.62
TMC1-201ENST00000297784 DNAJC30Q96LL9 226 aa4.91□□□□□ -1.62
TMC1-201ENST00000297784 C20orf173Q96LM9 149 aa4.91□□□□□ -1.62
TMC1-201ENST00000297784 IMUPQ9GZP8 106 aa4.91□□□□□ -1.62
TMC1-201ENST00000297784 STAB1Q9NY15 2570 aa4.91□□□□□ -1.62
TMC1-201ENST00000297784 H3BT86 120 aa4.9□□□□□ -1.62
TMC1-201ENST00000297784 M0R2P5 195 aa4.9□□□□□ -1.62
TMC1-201ENST00000297784 PMVKQ15126 192 aa4.9□□□□□ -1.62
TMC1-201ENST00000297784 KHDC1LQ5JSQ8 128 aa4.9□□□□□ -1.62
TMC1-201ENST00000297784 PRIMA1Q86XR5 153 aa4.9□□□□□ -1.62
TMC1-201ENST00000297784 DCANP1Q8TF63 244 aa4.9□□□□□ -1.62
TMC1-201ENST00000297784 AGPAT4-IT1Q9H0P7 198 aa4.9□□□□□ -1.62
TMC1-201ENST00000297784 A0A0J9YX75 114 aa4.9□□□□□ -1.63
TMC1-201ENST00000297784 A4D1N5 150 aa4.9□□□□□ -1.63
TMC1-201ENST00000297784 IGIPA6NJ69 53 aa4.9□□□□□ -1.63
TMC1-201ENST00000297784 TSHBP01222 138 aa4.9□□□□□ -1.63
TMC1-201ENST00000297784 MED14OSP0DP75 135 aa4.9□□□□□ -1.63
TMC1-201ENST00000297784 TSPEAR-AS2P59090 65 aa4.9□□□□□ -1.63
TMC1-201ENST00000297784 C9orf47Q6ZRZ4 202 aa4.9□□□□□ -1.63
TMC1-201ENST00000297784 DPH3P1Q9H4G8 78 aa4.9□□□□□ -1.63
TMC1-201ENST00000297784 CCL24O00175 119 aa4.89□□□□□ -1.63
TMC1-201ENST00000297784 SPATA3Q8NHX4 192 aa4.89□□□□□ -1.63
TMC1-201ENST00000297784 TIMM17AQ99595 171 aa4.89□□□□□ -1.63
TMC1-201ENST00000297784 PPDPFQ9H3Y8 114 aa4.89□□□□□ -1.63
TMC1-201ENST00000297784 SPANXCQ9NY87 97 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms