RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 TRAV8-4A0A0B4J246 113 aa7.46□□□□□ -1.22
CCDC36-201ENST00000296449 H3BMM0 161 aa7.46□□□□□ -1.22
CCDC36-201ENST00000296449 H3BT86 120 aa7.46□□□□□ -1.22
CCDC36-201ENST00000296449 PROK1P58294 105 aa7.46□□□□□ -1.22
CCDC36-201ENST00000296449 UBE2WQ96B02 151 aa7.46□□□□□ -1.22
CCDC36-201ENST00000296449 NDUFA12Q9UI09 145 aa7.46□□□□□ -1.22
CCDC36-201ENST00000296449 ICOSQ9Y6W8 199 aa7.46□□□□□ -1.22
CCDC36-201ENST00000296449 RBMY1A1P0DJD3 496 aaKnown RBP7.46□□□□□ -1.22
CCDC36-201ENST00000296449 RBMY1CP0DJD4 496 aa7.46□□□□□ -1.22
CCDC36-201ENST00000296449 ATP5J2P56134 94 aa7.46□□□□□ -1.22
CCDC36-201ENST00000296449 NDUFV3P56181 108 aaKnown RBP7.46□□□□□ -1.22
CCDC36-201ENST00000296449 RBMY1FQ15415 496 aaKnown RBP7.46□□□□□ -1.22
CCDC36-201ENST00000296449 C10orf105Q8TEF2 133 aa7.46□□□□□ -1.22
CCDC36-201ENST00000296449 MAP1AP78559 2803 aaPredicted RBP7.45□□□□□ -1.22
CCDC36-201ENST00000296449 A8MZ25 164 aa7.45□□□□□ -1.22
CCDC36-201ENST00000296449 COX6CP09669 75 aa7.45□□□□□ -1.22
CCDC36-201ENST00000296449 MRPL23Q16540 153 aaKnown RBP7.45□□□□□ -1.22
CCDC36-201ENST00000296449 MIAQ16674 131 aa7.45□□□□□ -1.22
CCDC36-201ENST00000296449 Q6ZSV7 163 aa7.45□□□□□ -1.22
CCDC36-201ENST00000296449 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.45□□□□□ -1.22
CCDC36-201ENST00000296449 PKD1L2Q7Z442 2459 aa7.45□□□□□ -1.22
CCDC36-201ENST00000296449 H7C423 109 aa7.45□□□□□ -1.22
CCDC36-201ENST00000296449 C2orf82Q6UX34 121 aa7.45□□□□□ -1.22
CCDC36-201ENST00000296449 VSIG2Q96IQ7 327 aa7.45□□□□□ -1.22
CCDC36-201ENST00000296449 Q9UF83 564 aa7.45□□□□□ -1.22
CCDC36-201ENST00000296449 ZFYVE26Q68DK2 2539 aa7.44□□□□□ -1.22
CCDC36-201ENST00000296449 TINCRA0A1B0GVN0 87 aa7.44□□□□□ -1.22
CCDC36-201ENST00000296449 AVPP01185 164 aa7.44□□□□□ -1.22
CCDC36-201ENST00000296449 TMEM89A2RUT3 159 aa7.44□□□□□ -1.22
CCDC36-201ENST00000296449 TIMM17BO60830 172 aa7.44□□□□□ -1.22
CCDC36-201ENST00000296449 IFITM1P13164 125 aa7.44□□□□□ -1.22
CCDC36-201ENST00000296449 HTN1P15515 57 aa7.44□□□□□ -1.22
CCDC36-201ENST00000296449 SYNJ2BPP57105 145 aa7.44□□□□□ -1.22
CCDC36-201ENST00000296449 NPC2P61916 151 aa7.44□□□□□ -1.22
CCDC36-201ENST00000296449 YAE1D1Q9NRH1 226 aa7.44□□□□□ -1.22
CCDC36-201ENST00000296449 SPANXA1Q9NS26 97 aa7.44□□□□□ -1.22
CCDC36-201ENST00000296449 CFAP46Q8IYW2 2715 aa7.43□□□□□ -1.22
CCDC36-201ENST00000296449 IGHV4-30-2A0A087WSY4 118 aa7.43□□□□□ -1.22
CCDC36-201ENST00000296449 FAM240AA0A1B0GVK7 77 aa7.43□□□□□ -1.22
CCDC36-201ENST00000296449 MSMBP08118 114 aa7.43□□□□□ -1.22
CCDC36-201ENST00000296449 TTC32Q5I0X7 151 aa7.43□□□□□ -1.22
CCDC36-201ENST00000296449 DEFB121Q5J5C9 76 aa7.43□□□□□ -1.22
CCDC36-201ENST00000296449 CRYBG3Q68DQ2 2970 aa7.43□□□□□ -1.22
CCDC36-201ENST00000296449 SMIM20Q8N5G0 67 aa7.43□□□□□ -1.22
CCDC36-201ENST00000296449 CHCHD7Q9BUK0 85 aa7.43□□□□□ -1.22
CCDC36-201ENST00000296449 KNCNA6PVL3 124 aa7.43□□□□□ -1.22
CCDC36-201ENST00000296449 LST1O00453 97 aa7.43□□□□□ -1.22
CCDC36-201ENST00000296449 LY6DQ14210 128 aa7.43□□□□□ -1.22
CCDC36-201ENST00000296449 PIK3CD-AS1Q5SR53 167 aa7.43□□□□□ -1.22
CCDC36-201ENST00000296449 TMEM61Q8N0U2 210 aa7.43□□□□□ -1.22
CCDC36-201ENST00000296449 C15orf53Q8NAA6 179 aa7.43□□□□□ -1.22
CCDC36-201ENST00000296449 CLEC2BQ92478 149 aa7.43□□□□□ -1.22
CCDC36-201ENST00000296449 UBE2D4Q9Y2X8 147 aa7.43□□□□□ -1.22
CCDC36-201ENST00000296449 CSPG4Q6UVK1 2322 aa7.42□□□□□ -1.22
CCDC36-201ENST00000296449 B5MCH6 92 aa7.42□□□□□ -1.22
CCDC36-201ENST00000296449 Q6ZSN1 163 aa7.42□□□□□ -1.22
CCDC36-201ENST00000296449 DUX5Q96PT3 197 aa7.42□□□□□ -1.22
CCDC36-201ENST00000296449 EPG5Q9HCE0 2579 aa7.42□□□□□ -1.22
CCDC36-201ENST00000296449 GAGE12JA6NER3 117 aa7.42□□□□□ -1.22
CCDC36-201ENST00000296449 GAGE7O76087 117 aa7.42□□□□□ -1.22
CCDC36-201ENST00000296449 IGHV4-59P01825 116 aa7.42□□□□□ -1.22
CCDC36-201ENST00000296449 PRM2P04554 102 aa7.42□□□□□ -1.22
CCDC36-201ENST00000296449 GAGE12FP0CL80 117 aa7.42□□□□□ -1.22
CCDC36-201ENST00000296449 GAGE12GP0CL81 117 aa7.42□□□□□ -1.22
CCDC36-201ENST00000296449 GAGE12IP0CL82 117 aa7.42□□□□□ -1.22
CCDC36-201ENST00000296449 GAGE4Q13068 117 aa7.42□□□□□ -1.22
CCDC36-201ENST00000296449 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.41□□□□□ -1.22
CCDC36-201ENST00000296449 IGKV2-29A2NJV5 120 aaPredicted RBP7.41□□□□□ -1.22
CCDC36-201ENST00000296449 CCL19Q99731 98 aa7.41□□□□□ -1.22
CCDC36-201ENST00000296449 CELSR2Q9HCU4 2923 aa7.41□□□□□ -1.22
CCDC36-201ENST00000296449 CREBBPQ92793 2442 aa7.41□□□□□ -1.22
CCDC36-201ENST00000296449 SPG11Q96JI7 2443 aa7.41□□□□□ -1.22
CCDC36-201ENST00000296449 IGSF10Q6WRI0 2623 aa7.41□□□□□ -1.22
CCDC36-201ENST00000296449 NACAE9PAV3 2078 aa7.4□□□□□ -1.22
CCDC36-201ENST00000296449 A8MTW9 85 aa7.4□□□□□ -1.22
CCDC36-201ENST00000296449 DAND5Q8N907 189 aa7.4□□□□□ -1.22
CCDC36-201ENST00000296449 LINC00467Q9BRT7 94 aa7.4□□□□□ -1.22
CCDC36-201ENST00000296449 TRAV25A0A0B4J276 109 aa7.4□□□□□ -1.23
CCDC36-201ENST00000296449 CCDC179H3BU77 68 aa7.4□□□□□ -1.23
CCDC36-201ENST00000296449 IGLV5-45A0A087WSX0 123 aa7.39□□□□□ -1.23
CCDC36-201ENST00000296449 HOXD3P31249 432 aaPredicted RBP7.39□□□□□ -1.23
CCDC36-201ENST00000296449 DEFB112Q30KQ8 113 aa7.39□□□□□ -1.23
CCDC36-201ENST00000296449 CDKN2A-AS1Q9UH64 79 aa7.39□□□□□ -1.23
CCDC36-201ENST00000296449 NDUFA1O15239 70 aa7.39□□□□□ -1.23
CCDC36-201ENST00000296449 GNLYP22749 145 aa7.39□□□□□ -1.23
CCDC36-201ENST00000296449 TIRAPP58753 221 aa7.39□□□□□ -1.23
CCDC36-201ENST00000296449 DUX3Q96PT4 197 aa7.39□□□□□ -1.23
CCDC36-201ENST00000296449 UTP20O75691 2785 aaKnown RBP7.38□□□□□ -1.23
CCDC36-201ENST00000296449 IGHV3-38A0A0C4DH36 116 aa7.38□□□□□ -1.23
CCDC36-201ENST00000296449 RBMY1BA6NDE4 496 aaKnown RBP7.38□□□□□ -1.23
CCDC36-201ENST00000296449 RBMY1EA6NEQ0 496 aaKnown RBP7.38□□□□□ -1.23
CCDC36-201ENST00000296449 RBMY1DP0C7P1 496 aaKnown RBP7.38□□□□□ -1.23
CCDC36-201ENST00000296449 DEFB131AP59861 70 aa7.38□□□□□ -1.23
CCDC36-201ENST00000296449 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.38□□□□□ -1.23
CCDC36-201ENST00000296449 DNAJC30Q96LL9 226 aa7.38□□□□□ -1.23
CCDC36-201ENST00000296449 B4DSR2 109 aa7.38□□□□□ -1.23
CCDC36-201ENST00000296449 TMEM101Q96IK0 257 aa7.38□□□□□ -1.23
CCDC36-201ENST00000296449 USP24Q9UPU5 2620 aa7.37□□□□□ -1.23
CCDC36-201ENST00000296449 TRBV7-7A0A0K0K1E9 115 aa7.37□□□□□ -1.23
CCDC36-201ENST00000296449 KMT2BQ9UMN6 2715 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms