RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 UBE2L6O14933 153 aa10.06□□□□□ -0.8
TMEM41A-201ENST00000296254 COX6A2Q02221 97 aa10.06□□□□□ -0.8
TMEM41A-201ENST00000296254 NIT2Q9NQR4 276 aa10.06□□□□□ -0.8
TMEM41A-201ENST00000296254 TRGC1P0CF51 173 aa10.05□□□□□ -0.8
TMEM41A-201ENST00000296254 AMTP48728 403 aa10.05□□□□□ -0.8
TMEM41A-201ENST00000296254 PRR3P79522 188 aaKnown RBP10.05□□□□□ -0.8
TMEM41A-201ENST00000296254 COTL1Q14019 142 aa10.05□□□□□ -0.8
TMEM41A-201ENST00000296254 DPH3P1Q9H4G8 78 aa10.05□□□□□ -0.8
TMEM41A-201ENST00000296254 MANBALQ9NQG1 85 aa10.05□□□□□ -0.8
TMEM41A-201ENST00000296254 GAGE12HA6NDE8 117 aa10.04□□□□□ -0.8
TMEM41A-201ENST00000296254 F2Z2F3 143 aa10.04□□□□□ -0.8
TMEM41A-201ENST00000296254 NDUFS6O75380 124 aaKnown RBP10.04□□□□□ -0.8
TMEM41A-201ENST00000296254 RPS10P46783 165 aaKnown RBP10.04□□□□□ -0.8
TMEM41A-201ENST00000296254 CFAP161Q6P656 301 aa10.04□□□□□ -0.8
TMEM41A-201ENST00000296254 SMIM12Q96EX1 92 aa10.04□□□□□ -0.8
TMEM41A-201ENST00000296254 LINC01600Q96MT4 127 aa10.04□□□□□ -0.8
TMEM41A-201ENST00000296254 BATF3Q9NR55 127 aa10.04□□□□□ -0.8
TMEM41A-201ENST00000296254 GNG13Q9P2W3 67 aa10.04□□□□□ -0.8
TMEM41A-201ENST00000296254 IGKV2-24A0A0C4DH68 120 aa10.03□□□□□ -0.8
TMEM41A-201ENST00000296254 XKRY2A2RUG3 117 aa10.03□□□□□ -0.8
TMEM41A-201ENST00000296254 BCL2L11O43521 198 aa10.03□□□□□ -0.8
TMEM41A-201ENST00000296254 MAJINQ3KP22 176 aa10.03□□□□□ -0.8
TMEM41A-201ENST00000296254 HIGD2BQ4VC39 106 aa10.03□□□□□ -0.8
TMEM41A-201ENST00000296254 PRSS3P2Q8NHM4 247 aa10.03□□□□□ -0.8
TMEM41A-201ENST00000296254 GVQW2A0A096LPI5 108 aaPredicted RBP10.02□□□□□ -0.81
TMEM41A-201ENST00000296254 CTRLP40313 264 aa10.02□□□□□ -0.81
TMEM41A-201ENST00000296254 CCL20P78556 96 aa10.02□□□□□ -0.81
TMEM41A-201ENST00000296254 LYZL1Q6UWQ5 148 aa10.02□□□□□ -0.81
TMEM41A-201ENST00000296254 GTSF1Q8WW33 167 aa10.02□□□□□ -0.81
TMEM41A-201ENST00000296254 IGKV3OR2-268A0A0C4DH90 116 aa10.01□□□□□ -0.81
TMEM41A-201ENST00000296254 KANTRA0A1W2PQU2 76 aa10.01□□□□□ -0.81
TMEM41A-201ENST00000296254 NTF3P20783 257 aa10.01□□□□□ -0.81
TMEM41A-201ENST00000296254 GNG4P50150 75 aa10.01□□□□□ -0.81
TMEM41A-201ENST00000296254 STPG4Q8N801 248 aa10.01□□□□□ -0.81
TMEM41A-201ENST00000296254 CHCHD10Q8WYQ3 142 aaPredicted RBP10.01□□□□□ -0.81
TMEM41A-201ENST00000296254 CNFNQ9BYD5 112 aa10.01□□□□□ -0.81
TMEM41A-201ENST00000296254 TRBV20OR9-2A0A075B6H5 130 aa10□□□□□ -0.81
TMEM41A-201ENST00000296254 TRAV1-1A0A0B4J248 108 aa10□□□□□ -0.81
TMEM41A-201ENST00000296254 RAB19A4D1S5 217 aa10□□□□□ -0.81
TMEM41A-201ENST00000296254 HMSDA8MTL9 139 aa10□□□□□ -0.81
TMEM41A-201ENST00000296254 IFNA1P01562 189 aa10□□□□□ -0.81
TMEM41A-201ENST00000296254 RGS21Q2M5E4 152 aa10□□□□□ -0.81
TMEM41A-201ENST00000296254 A0A096LNI7 61 aa9.99□□□□□ -0.81
TMEM41A-201ENST00000296254 EIF5AP63241 154 aaKnown RBP9.99□□□□□ -0.81
TMEM41A-201ENST00000296254 ODF1Q14990 250 aa9.99□□□□□ -0.81
TMEM41A-201ENST00000296254 Q6ZNX1 250 aa9.99□□□□□ -0.81
TMEM41A-201ENST00000296254 C9orf62Q8N4C0 152 aa9.99□□□□□ -0.81
TMEM41A-201ENST00000296254 GATD1Q8NB37 220 aa9.99□□□□□ -0.81
TMEM41A-201ENST00000296254 TRAV26-2A0A0B4J265 109 aa9.98□□□□□ -0.81
TMEM41A-201ENST00000296254 A0A0J9YXV3 536 aa9.98□□□□□ -0.81
TMEM41A-201ENST00000296254 AMMECR1LQ6DCA0 310 aa9.98□□□□□ -0.81
TMEM41A-201ENST00000296254 NCR2O95944 276 aa9.97□□□□□ -0.81
TMEM41A-201ENST00000296254 MEF2BQ02080 365 aaPredicted RBP9.97□□□□□ -0.81
TMEM41A-201ENST00000296254 FOXI1Q12951 378 aa9.97□□□□□ -0.81
TMEM41A-201ENST00000296254 TWIST1Q15672 202 aa9.97□□□□□ -0.81
TMEM41A-201ENST00000296254 LYPD6BQ8NI32 183 aa9.97□□□□□ -0.81
TMEM41A-201ENST00000296254 BIN3Q9NQY0 253 aa9.97□□□□□ -0.81
TMEM41A-201ENST00000296254 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.96□□□□□ -0.82
TMEM41A-201ENST00000296254 IGKV2-29A2NJV5 120 aaPredicted RBP9.96□□□□□ -0.82
TMEM41A-201ENST00000296254 H7C423 109 aa9.96□□□□□ -0.82
TMEM41A-201ENST00000296254 PDE6DO43924 150 aa9.96□□□□□ -0.82
TMEM41A-201ENST00000296254 APCSP02743 223 aa9.96□□□□□ -0.82
TMEM41A-201ENST00000296254 RNASEKQ6P5S7 137 aaKnown RBP9.96□□□□□ -0.82
TMEM41A-201ENST00000296254 RPL39LQ96EH5 51 aaKnown RBP9.96□□□□□ -0.82
TMEM41A-201ENST00000296254 LINC00474Q9P2X8 69 aa9.96□□□□□ -0.82
TMEM41A-201ENST00000296254 FGF6P10767 208 aa9.95□□□□□ -0.82
TMEM41A-201ENST00000296254 SPINK6Q6UWN8 80 aa9.95□□□□□ -0.82
TMEM41A-201ENST00000296254 PKIGQ9Y2B9 76 aa9.95□□□□□ -0.82
TMEM41A-201ENST00000296254 TEX46H3BTG2 121 aa9.94□□□□□ -0.82
TMEM41A-201ENST00000296254 ZNF25P17030 456 aaPredicted RBP9.94□□□□□ -0.82
TMEM41A-201ENST00000296254 KRTAP10-8P60410 259 aa9.94□□□□□ -0.82
TMEM41A-201ENST00000296254 REG3GQ6UW15 175 aa9.94□□□□□ -0.82
TMEM41A-201ENST00000296254 NUDT10Q8NFP7 164 aa9.94□□□□□ -0.82
TMEM41A-201ENST00000296254 NUDT11Q96G61 164 aa9.94□□□□□ -0.82
TMEM41A-201ENST00000296254 MED9Q9NWA0 146 aa9.94□□□□□ -0.82
TMEM41A-201ENST00000296254 BCL2P10415 239 aa9.93□□□□□ -0.82
TMEM41A-201ENST00000296254 XCL1P47992 114 aa9.93□□□□□ -0.82
TMEM41A-201ENST00000296254 OR5A1Q8NGJ0 315 aa9.93□□□□□ -0.82
TMEM41A-201ENST00000296254 CARD19Q96LW7 228 aa9.93□□□□□ -0.82
TMEM41A-201ENST00000296254 RPP21Q9H633 154 aaKnown RBP9.93□□□□□ -0.82
TMEM41A-201ENST00000296254 SDHAF1A6NFY7 115 aa9.92□□□□□ -0.82
TMEM41A-201ENST00000296254 IGHV1-58A0A0C4DH39 117 aa9.91□□□□□ -0.82
TMEM41A-201ENST00000296254 TEX261Q6UWH6 196 aa9.91□□□□□ -0.82
TMEM41A-201ENST00000296254 LINC00526Q96FQ7 95 aa9.91□□□□□ -0.82
TMEM41A-201ENST00000296254 RNASE7Q9H1E1 156 aaKnown RBP9.91□□□□□ -0.82
TMEM41A-201ENST00000296254 LINC00959A0A1B0GUT2 108 aa9.9□□□□□ -0.82
TMEM41A-201ENST00000296254 K7EN84 100 aa9.9□□□□□ -0.82
TMEM41A-201ENST00000296254 CCL25O15444 150 aa9.9□□□□□ -0.82
TMEM41A-201ENST00000296254 FOXA3P55318 350 aaPredicted RBP9.9□□□□□ -0.82
TMEM41A-201ENST00000296254 SRSF9Q13242 221 aaKnown RBP eCLIP9.9□□□□□ -0.82
TMEM41A-201ENST00000296254 EIF5AL1Q6IS14 154 aaKnown RBP9.9□□□□□ -0.82
TMEM41A-201ENST00000296254 Q6ZRP5 223 aa9.9□□□□□ -0.82
TMEM41A-201ENST00000296254 SMIM15Q7Z3B0 74 aa9.9□□□□□ -0.82
TMEM41A-201ENST00000296254 BTF3L4Q96K17 158 aa9.9□□□□□ -0.82
TMEM41A-201ENST00000296254 FAM231BA6NCW3 169 aa9.89□□□□□ -0.83
TMEM41A-201ENST00000296254 TRBV6-5A0A0K0K1A5 114 aa9.88□□□□□ -0.83
TMEM41A-201ENST00000296254 I3L3M4 83 aa9.88□□□□□ -0.83
TMEM41A-201ENST00000296254 TMEM101Q96IK0 257 aa9.88□□□□□ -0.83
TMEM41A-201ENST00000296254 LPAP08519 4548 aa9.88□□□□□ -0.83
TMEM41A-201ENST00000296254 TSHBP01222 138 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 240.9 ms