RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 AP5S1Q9NUS5 200 aa12.53□□□□□ -0.4
CXCL3-201ENST00000296026 AMTP48728 403 aa12.52□□□□□ -0.41
CXCL3-201ENST00000296026 SULT1A2P50226 295 aa12.52□□□□□ -0.41
CXCL3-201ENST00000296026 CIRBPQ14011 172 aaKnown RBP12.52□□□□□ -0.41
CXCL3-201ENST00000296026 COTL1Q14019 142 aa12.52□□□□□ -0.41
CXCL3-201ENST00000296026 C9orf62Q8N4C0 152 aa12.52□□□□□ -0.41
CXCL3-201ENST00000296026 PLA2G2DQ9UNK4 145 aa12.52□□□□□ -0.41
CXCL3-201ENST00000296026 FAT3Q8TDW7 4589 aa12.52□□□□□ -0.41
CXCL3-201ENST00000296026 IGHV3-64A0A075B6Q5 118 aa12.51□□□□□ -0.41
CXCL3-201ENST00000296026 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.51□□□□□ -0.41
CXCL3-201ENST00000296026 SLPIP03973 132 aa12.51□□□□□ -0.41
CXCL3-201ENST00000296026 WDR73Q6P4I2 378 aa12.51□□□□□ -0.41
CXCL3-201ENST00000296026 NUDT10Q8NFP7 164 aa12.51□□□□□ -0.41
CXCL3-201ENST00000296026 DPH3Q96FX2 82 aa12.51□□□□□ -0.41
CXCL3-201ENST00000296026 NUDT11Q96G61 164 aa12.51□□□□□ -0.41
CXCL3-201ENST00000296026 BCL2P10415 239 aa12.5□□□□□ -0.41
CXCL3-201ENST00000296026 CTRLP40313 264 aa12.5□□□□□ -0.41
CXCL3-201ENST00000296026 KRTAP3-3Q9BYR6 98 aa12.5□□□□□ -0.41
CXCL3-201ENST00000296026 KRTAP3-2Q9BYR7 98 aa12.5□□□□□ -0.41
CXCL3-201ENST00000296026 TWIST1Q15672 202 aa12.49□□□□□ -0.41
CXCL3-201ENST00000296026 CHTF8P0CG12 524 aa12.48□□□□□ -0.41
CXCL3-201ENST00000296026 GATD1Q8NB37 220 aa12.48□□□□□ -0.41
CXCL3-201ENST00000296026 CNFNQ9BYD5 112 aa12.48□□□□□ -0.41
CXCL3-201ENST00000296026 A0A087WYN8 130 aa12.47□□□□□ -0.41
CXCL3-201ENST00000296026 TRAV26-2A0A0B4J265 109 aa12.47□□□□□ -0.41
CXCL3-201ENST00000296026 IGKV3OR2-268A0A0C4DH90 116 aa12.47□□□□□ -0.41
CXCL3-201ENST00000296026 GAGE12HA6NDE8 117 aa12.47□□□□□ -0.41
CXCL3-201ENST00000296026 RNF185Q96GF1 192 aa12.47□□□□□ -0.41
CXCL3-201ENST00000296026 RPP21Q9H633 154 aaKnown RBP12.47□□□□□ -0.41
CXCL3-201ENST00000296026 HMCN2Q8NDA2 5059 aa12.47□□□□□ -0.41
CXCL3-201ENST00000296026 PKHD1L1Q86WI1 4243 aa12.47□□□□□ -0.41
CXCL3-201ENST00000296026 C15orf56Q8N910 161 aa12.46□□□□□ -0.41
CXCL3-201ENST00000296026 SPACA4Q8TDM5 124 aa12.46□□□□□ -0.41
CXCL3-201ENST00000296026 RNASE7Q9H1E1 156 aaKnown RBP12.46□□□□□ -0.41
CXCL3-201ENST00000296026 CFAP161Q6P656 301 aa12.45□□□□□ -0.42
CXCL3-201ENST00000296026 Q6ZRU5 148 aa12.45□□□□□ -0.42
CXCL3-201ENST00000296026 K7EN84 100 aa12.44□□□□□ -0.42
CXCL3-201ENST00000296026 AMMECR1LQ6DCA0 310 aa12.44□□□□□ -0.42
CXCL3-201ENST00000296026 OCC1Q8TAD7 63 aa12.44□□□□□ -0.42
CXCL3-201ENST00000296026 RPL39LQ96EH5 51 aaKnown RBP12.44□□□□□ -0.42
CXCL3-201ENST00000296026 MT1HL1P0DM35 61 aa12.43□□□□□ -0.42
CXCL3-201ENST00000296026 TAGLN2P37802 199 aaKnown RBP12.43□□□□□ -0.42
CXCL3-201ENST00000296026 Q6ZNX1 250 aa12.43□□□□□ -0.42
CXCL3-201ENST00000296026 HIGD2BQ4VC39 106 aa12.42□□□□□ -0.42
CXCL3-201ENST00000296026 SMIM15Q7Z3B0 74 aa12.42□□□□□ -0.42
CXCL3-201ENST00000296026 SLC51BQ86UW2 128 aa12.42□□□□□ -0.42
CXCL3-201ENST00000296026 GTSF1Q8WW33 167 aa12.42□□□□□ -0.42
CXCL3-201ENST00000296026 PLAC8Q9NZF1 115 aa12.42□□□□□ -0.42
CXCL3-201ENST00000296026 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.41□□□□□ -0.42
CXCL3-201ENST00000296026 IGKV2-29A2NJV5 120 aaPredicted RBP12.41□□□□□ -0.42
CXCL3-201ENST00000296026 NCR2O95944 276 aa12.41□□□□□ -0.42
CXCL3-201ENST00000296026 RPS10P46783 165 aaKnown RBP12.41□□□□□ -0.42
CXCL3-201ENST00000296026 FOXA3P55318 350 aaPredicted RBP12.41□□□□□ -0.42
CXCL3-201ENST00000296026 COX6A2Q02221 97 aa12.41□□□□□ -0.42
CXCL3-201ENST00000296026 RNASEKQ6P5S7 137 aaKnown RBP12.41□□□□□ -0.42
CXCL3-201ENST00000296026 CHCHD10Q8WYQ3 142 aaPredicted RBP12.41□□□□□ -0.42
CXCL3-201ENST00000296026 APCSP02743 223 aa12.4□□□□□ -0.42
CXCL3-201ENST00000296026 TCTE3Q8IZS6 198 aa12.4□□□□□ -0.42
CXCL3-201ENST00000296026 SDHAF1A6NFY7 115 aa12.39□□□□□ -0.43
CXCL3-201ENST00000296026 H7C423 109 aa12.39□□□□□ -0.43
CXCL3-201ENST00000296026 PHOX2AO14813 284 aa12.39□□□□□ -0.43
CXCL3-201ENST00000296026 FGF6P10767 208 aa12.39□□□□□ -0.43
CXCL3-201ENST00000296026 TEX261Q6UWH6 196 aa12.39□□□□□ -0.43
CXCL3-201ENST00000296026 PRSS3P2Q8NHM4 247 aa12.39□□□□□ -0.43
CXCL3-201ENST00000296026 NDUFS6O75380 124 aaKnown RBP12.38□□□□□ -0.43
CXCL3-201ENST00000296026 C7orf33Q8WU49 177 aa12.38□□□□□ -0.43
CXCL3-201ENST00000296026 GVQW2A0A096LPI5 108 aaPredicted RBP12.37□□□□□ -0.43
CXCL3-201ENST00000296026 IGKV2-24A0A0C4DH68 120 aa12.37□□□□□ -0.43
CXCL3-201ENST00000296026 GATCO43716 136 aaKnown RBP12.37□□□□□ -0.43
CXCL3-201ENST00000296026 MAJINQ3KP22 176 aa12.37□□□□□ -0.43
CXCL3-201ENST00000296026 A8MWL6 223 aa12.35□□□□□ -0.43
CXCL3-201ENST00000296026 I3L3M4 83 aa12.35□□□□□ -0.43
CXCL3-201ENST00000296026 ZNF25P17030 456 aaPredicted RBP12.35□□□□□ -0.43
CXCL3-201ENST00000296026 PMCHP20382 165 aa12.35□□□□□ -0.43
CXCL3-201ENST00000296026 FOXI1Q12951 378 aa12.35□□□□□ -0.43
CXCL3-201ENST00000296026 FAM231DQ6ZW35 169 aa12.35□□□□□ -0.43
CXCL3-201ENST00000296026 OR5A1Q8NGJ0 315 aa12.35□□□□□ -0.43
CXCL3-201ENST00000296026 FAM231BA6NCW3 169 aa12.34□□□□□ -0.43
CXCL3-201ENST00000296026 TMEM250H0YL14 139 aa12.34□□□□□ -0.43
CXCL3-201ENST00000296026 BTF3L4Q96K17 158 aa12.34□□□□□ -0.43
CXCL3-201ENST00000296026 TRBV6-5A0A0K0K1A5 114 aa12.33□□□□□ -0.44
CXCL3-201ENST00000296026 XCL1P47992 114 aa12.33□□□□□ -0.44
CXCL3-201ENST00000296026 STPG4Q8N801 248 aa12.33□□□□□ -0.44
CXCL3-201ENST00000296026 TMEM101Q96IK0 257 aa12.33□□□□□ -0.44
CXCL3-201ENST00000296026 UBR4Q5T4S7 5183 aa12.33□□□□□ -0.44
CXCL3-201ENST00000296026 A0A096LNI7 61 aa12.32□□□□□ -0.44
CXCL3-201ENST00000296026 GAS8-AS1O95177 125 aa12.32□□□□□ -0.44
CXCL3-201ENST00000296026 LYPD6BQ8NI32 183 aa12.32□□□□□ -0.44
CXCL3-201ENST00000296026 LINC00959A0A1B0GUT2 108 aa12.31□□□□□ -0.44
CXCL3-201ENST00000296026 CCL25O15444 150 aa12.31□□□□□ -0.44
CXCL3-201ENST00000296026 TSHBP01222 138 aa12.31□□□□□ -0.44
CXCL3-201ENST00000296026 ESDP10768 282 aa12.31□□□□□ -0.44
CXCL3-201ENST00000296026 CEBPGP53567 150 aa12.31□□□□□ -0.44
CXCL3-201ENST00000296026 CT83Q5H943 113 aa12.31□□□□□ -0.44
CXCL3-201ENST00000296026 BORCS7Q96B45 105 aa12.31□□□□□ -0.44
CXCL3-201ENST00000296026 ST20Q9HBF5 79 aa12.31□□□□□ -0.44
CXCL3-201ENST00000296026 TMEM242Q9NWH2 141 aa12.31□□□□□ -0.44
CXCL3-201ENST00000296026 BLOC1S1P78537 153 aa12.3□□□□□ -0.44
CXCL3-201ENST00000296026 PRR3P79522 188 aaKnown RBP12.3□□□□□ -0.44
CXCL3-201ENST00000296026 ALKAL2Q6UX46 152 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 205 ms