RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 BAGE2Q86Y30 109 aa5.87□□□□□ -1.47
CNOT9-202ENST00000295701 IGHV1-24A0A0C4DH33 117 aa5.86□□□□□ -1.47
CNOT9-202ENST00000295701 CXCL1P09341 107 aa5.86□□□□□ -1.47
CNOT9-202ENST00000295701 PKIAP61925 76 aa5.86□□□□□ -1.47
CNOT9-202ENST00000295701 IQCJQ1A5X6 159 aa5.86□□□□□ -1.47
CNOT9-202ENST00000295701 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.86□□□□□ -1.47
CNOT9-202ENST00000295701 CLRN3Q8NCR9 226 aa5.86□□□□□ -1.47
CNOT9-202ENST00000295701 IGHV3-64A0A075B6Q5 118 aa5.85□□□□□ -1.47
CNOT9-202ENST00000295701 SMLR1H3BR10 107 aa5.85□□□□□ -1.47
CNOT9-202ENST00000295701 M0QY20 66 aa5.85□□□□□ -1.47
CNOT9-202ENST00000295701 PHOX2AO14813 284 aa5.85□□□□□ -1.47
CNOT9-202ENST00000295701 MGPP08493 103 aa5.85□□□□□ -1.47
CNOT9-202ENST00000295701 TMEM97Q5BJF2 176 aa5.85□□□□□ -1.47
CNOT9-202ENST00000295701 SUMO4Q6EEV6 95 aa5.85□□□□□ -1.47
CNOT9-202ENST00000295701 SPACA4Q8TDM5 124 aa5.85□□□□□ -1.47
CNOT9-202ENST00000295701 SFT2D1Q8WV19 159 aa5.85□□□□□ -1.47
CNOT9-202ENST00000295701 ARPC5O15511 151 aa5.84□□□□□ -1.47
CNOT9-202ENST00000295701 SMIM17P0DL12 118 aa5.84□□□□□ -1.47
CNOT9-202ENST00000295701 NKX2-5P52952 324 aaPredicted RBP5.84□□□□□ -1.47
CNOT9-202ENST00000295701 TMUB2Q71RG4 321 aa5.84□□□□□ -1.47
CNOT9-202ENST00000295701 PRSS3P2Q8NHM4 247 aa5.84□□□□□ -1.47
CNOT9-202ENST00000295701 FAM213BQ8TBF2 198 aa5.84□□□□□ -1.47
CNOT9-202ENST00000295701 MBD3L1Q8WWY6 194 aa5.84□□□□□ -1.47
CNOT9-202ENST00000295701 TCEAL7Q9BRU2 100 aa5.84□□□□□ -1.47
CNOT9-202ENST00000295701 TPPP3Q9BW30 176 aa5.84□□□□□ -1.47
CNOT9-202ENST00000295701 PLAC8Q9NZF1 115 aa5.84□□□□□ -1.47
CNOT9-202ENST00000295701 LPAP08519 4548 aa5.83□□□□□ -1.48
CNOT9-202ENST00000295701 TRAV8-4A0A0B4J246 113 aa5.83□□□□□ -1.48
CNOT9-202ENST00000295701 P01737 135 aa5.83□□□□□ -1.48
CNOT9-202ENST00000295701 S100A9P06702 114 aaKnown RBP5.83□□□□□ -1.48
CNOT9-202ENST00000295701 COX6A2Q02221 97 aa5.83□□□□□ -1.48
CNOT9-202ENST00000295701 HIGD2BQ4VC39 106 aa5.83□□□□□ -1.48
CNOT9-202ENST00000295701 C15orf56Q8N910 161 aa5.83□□□□□ -1.48
CNOT9-202ENST00000295701 AP1S3Q96PC3 154 aa5.83□□□□□ -1.48
CNOT9-202ENST00000295701 TMEM243Q9BU79 118 aa5.83□□□□□ -1.48
CNOT9-202ENST00000295701 IGKV2-24A0A0C4DH68 120 aa5.82□□□□□ -1.48
CNOT9-202ENST00000295701 IGKV3OR2-268A0A0C4DH90 116 aa5.82□□□□□ -1.48
CNOT9-202ENST00000295701 A0A1B0GUV1 79 aa5.82□□□□□ -1.48
CNOT9-202ENST00000295701 GAGE12HA6NDE8 117 aa5.82□□□□□ -1.48
CNOT9-202ENST00000295701 IGLC6P0CF74 106 aa5.82□□□□□ -1.48
CNOT9-202ENST00000295701 RPL35P42766 123 aaKnown RBP5.82□□□□□ -1.48
CNOT9-202ENST00000295701 CCL20P78556 96 aa5.82□□□□□ -1.48
CNOT9-202ENST00000295701 MAJINQ3KP22 176 aa5.82□□□□□ -1.48
CNOT9-202ENST00000295701 LYPD6BQ8NI32 183 aa5.82□□□□□ -1.48
CNOT9-202ENST00000295701 GTSF1Q8WW33 167 aa5.82□□□□□ -1.48
CNOT9-202ENST00000295701 RNF185Q96GF1 192 aa5.82□□□□□ -1.48
CNOT9-202ENST00000295701 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.81□□□□□ -1.48
CNOT9-202ENST00000295701 RAB19A4D1S5 217 aa5.81□□□□□ -1.48
CNOT9-202ENST00000295701 PFDN1O60925 122 aa5.81□□□□□ -1.48
CNOT9-202ENST00000295701 RASL11AQ6T310 242 aa5.81□□□□□ -1.48
CNOT9-202ENST00000295701 KCNRGQ8N5I3 272 aa5.81□□□□□ -1.48
CNOT9-202ENST00000295701 FER1L6-AS1Q8NA97 138 aa5.81□□□□□ -1.48
CNOT9-202ENST00000295701 OR2D3Q8NGH3 330 aa5.81□□□□□ -1.48
CNOT9-202ENST00000295701 LINC01600Q96MT4 127 aa5.81□□□□□ -1.48
CNOT9-202ENST00000295701 DPH3P1Q9H4G8 78 aa5.81□□□□□ -1.48
CNOT9-202ENST00000295701 RPS10P46783 165 aaKnown RBP5.8□□□□□ -1.48
CNOT9-202ENST00000295701 SULT1A2P50226 295 aa5.8□□□□□ -1.48
CNOT9-202ENST00000295701 CENPWQ5EE01 88 aa5.8□□□□□ -1.48
CNOT9-202ENST00000295701 LYZL1Q6UWQ5 148 aa5.8□□□□□ -1.48
CNOT9-202ENST00000295701 STPG4Q8N801 248 aa5.8□□□□□ -1.48
CNOT9-202ENST00000295701 C19orf71A6NCJ1 209 aa5.79□□□□□ -1.48
CNOT9-202ENST00000295701 H7C1H1 209 aa5.79□□□□□ -1.48
CNOT9-202ENST00000295701 UBE2L6O14933 153 aa5.79□□□□□ -1.48
CNOT9-202ENST00000295701 NDUFS6O75380 124 aaKnown RBP5.79□□□□□ -1.48
CNOT9-202ENST00000295701 NTF3P20783 257 aa5.79□□□□□ -1.48
CNOT9-202ENST00000295701 AMTP48728 403 aa5.79□□□□□ -1.48
CNOT9-202ENST00000295701 KRTAP10-8P60410 259 aa5.79□□□□□ -1.48
CNOT9-202ENST00000295701 PRR3P79522 188 aaKnown RBP5.79□□□□□ -1.48
CNOT9-202ENST00000295701 C7orf33Q8WU49 177 aa5.79□□□□□ -1.48
CNOT9-202ENST00000295701 NIT2Q9NQR4 276 aa5.79□□□□□ -1.48
CNOT9-202ENST00000295701 A0A096LNI7 61 aa5.78□□□□□ -1.48
CNOT9-202ENST00000295701 TRAV26-2A0A0B4J265 109 aa5.78□□□□□ -1.48
CNOT9-202ENST00000295701 CACNG7P62955 275 aa5.78□□□□□ -1.48
CNOT9-202ENST00000295701 COTL1Q14019 142 aa5.78□□□□□ -1.48
CNOT9-202ENST00000295701 WDR73Q6P4I2 378 aa5.78□□□□□ -1.48
CNOT9-202ENST00000295701 GATD1Q8NB37 220 aa5.78□□□□□ -1.48
CNOT9-202ENST00000295701 C11orf52Q96A22 123 aa5.78□□□□□ -1.48
CNOT9-202ENST00000295701 LINC00526Q96FQ7 95 aa5.78□□□□□ -1.48
CNOT9-202ENST00000295701 PGLYRP4Q96LB8 373 aa5.78□□□□□ -1.48
CNOT9-202ENST00000295701 GNG13Q9P2W3 67 aa5.78□□□□□ -1.48
CNOT9-202ENST00000295701 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.77□□□□□ -1.49
CNOT9-202ENST00000295701 A0A0J9YXV3 536 aa5.77□□□□□ -1.49
CNOT9-202ENST00000295701 IGKV2-29A2NJV5 120 aaPredicted RBP5.77□□□□□ -1.49
CNOT9-202ENST00000295701 UMAD1C9J7I0 102 aa5.77□□□□□ -1.49
CNOT9-202ENST00000295701 IFNA1P01562 189 aa5.77□□□□□ -1.49
CNOT9-202ENST00000295701 FOXA3P55318 350 aaPredicted RBP5.77□□□□□ -1.49
CNOT9-202ENST00000295701 RPS20P60866 119 aaKnown RBP5.77□□□□□ -1.49
CNOT9-202ENST00000295701 CFAP161Q6P656 301 aa5.77□□□□□ -1.49
CNOT9-202ENST00000295701 Q6ZNX1 250 aa5.77□□□□□ -1.49
CNOT9-202ENST00000295701 CHCHD10Q8WYQ3 142 aaPredicted RBP5.77□□□□□ -1.49
CNOT9-202ENST00000295701 RPL39LQ96EH5 51 aaKnown RBP5.77□□□□□ -1.49
CNOT9-202ENST00000295701 TRBV20OR9-2A0A075B6H5 130 aa5.76□□□□□ -1.49
CNOT9-202ENST00000295701 TRGC1P0CF51 173 aa5.76□□□□□ -1.49
CNOT9-202ENST00000295701 FOXI1Q12951 378 aa5.76□□□□□ -1.49
CNOT9-202ENST00000295701 RNASEKQ6P5S7 137 aaKnown RBP5.76□□□□□ -1.49
CNOT9-202ENST00000295701 GVQW2A0A096LPI5 108 aaPredicted RBP5.75□□□□□ -1.49
CNOT9-202ENST00000295701 F2Z2F3 143 aa5.75□□□□□ -1.49
CNOT9-202ENST00000295701 BCL2L11O43521 198 aa5.75□□□□□ -1.49
CNOT9-202ENST00000295701 SRSF9Q13242 221 aaKnown RBP eCLIP5.75□□□□□ -1.49
CNOT9-202ENST00000295701 ZNF345Q14585 488 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms