RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 MUC4Q99102 2169 aa9.4□□□□□ -0.9
SLX4-201ENST00000294008 PARP14Q460N5 1801 aa9.4□□□□□ -0.9
SLX4-201ENST00000294008 I3L2K1 104 aa9.4□□□□□ -0.9
SLX4-201ENST00000294008 LOC107984640A0A0U1RRK4 108 aa9.4□□□□□ -0.9
SLX4-201ENST00000294008 PCOTHQ58A44 107 aa9.4□□□□□ -0.9
SLX4-201ENST00000294008 CELA1Q9UNI1 258 aa9.4□□□□□ -0.9
SLX4-201ENST00000294008 IGLV11-55A0A075B6I3 123 aa9.4□□□□□ -0.91
SLX4-201ENST00000294008 K7EIM0 57 aa9.4□□□□□ -0.91
SLX4-201ENST00000294008 XIRP1Q702N8 1843 aaKnown RBP9.4□□□□□ -0.91
SLX4-201ENST00000294008 LINC01556Q5JQF7 62 aa9.39□□□□□ -0.91
SLX4-201ENST00000294008 Q8N976 141 aa9.39□□□□□ -0.91
SLX4-201ENST00000294008 ANK1P16157 1881 aa9.39□□□□□ -0.91
SLX4-201ENST00000294008 WDR81Q562E7 1941 aa9.39□□□□□ -0.91
SLX4-201ENST00000294008 LINC01548A6NM66 108 aa9.39□□□□□ -0.91
SLX4-201ENST00000294008 C6orf99Q4VX62 202 aa9.39□□□□□ -0.91
SLX4-201ENST00000294008 C1orf137Q5JT78 98 aa9.39□□□□□ -0.91
SLX4-201ENST00000294008 TICRRQ7Z2Z1 1910 aa9.38□□□□□ -0.91
SLX4-201ENST00000294008 COL4A5P29400 1685 aa9.38□□□□□ -0.91
SLX4-201ENST00000294008 MIAQ16674 131 aa9.38□□□□□ -0.91
SLX4-201ENST00000294008 MYLKQ15746 1914 aa9.38□□□□□ -0.91
SLX4-201ENST00000294008 IGLC6P0CF74 106 aa9.38□□□□□ -0.91
SLX4-201ENST00000294008 OXLD1Q5BKU9 147 aa9.37□□□□□ -0.91
SLX4-201ENST00000294008 NYNRINQ9P2P1 1898 aaKnown RBP9.37□□□□□ -0.91
SLX4-201ENST00000294008 WFDC10AQ9H1F0 79 aa9.37□□□□□ -0.91
SLX4-201ENST00000294008 CSDC2Q9Y534 153 aaKnown RBP9.37□□□□□ -0.91
SLX4-201ENST00000294008 BRWD3Q6RI45 1802 aa9.37□□□□□ -0.91
SLX4-201ENST00000294008 C17orf82Q86X59 251 aaPredicted RBP9.37□□□□□ -0.91
SLX4-201ENST00000294008 XGP55808 180 aa9.36□□□□□ -0.91
SLX4-201ENST00000294008 A0A0J9YX75 114 aa9.36□□□□□ -0.91
SLX4-201ENST00000294008 MED13Q9UHV7 2174 aa9.36□□□□□ -0.91
SLX4-201ENST00000294008 RPL28P46779 137 aaKnown RBP9.35□□□□□ -0.91
SLX4-201ENST00000294008 PCNX1Q96RV3 2341 aa9.35□□□□□ -0.91
SLX4-201ENST00000294008 M0QXV9 152 aa9.35□□□□□ -0.91
SLX4-201ENST00000294008 FOXL2NBQ6ZUU3 175 aa9.35□□□□□ -0.91
SLX4-201ENST00000294008 PROK2Q9HC23 129 aa9.35□□□□□ -0.91
SLX4-201ENST00000294008 E9PLD3 99 aa9.35□□□□□ -0.91
SLX4-201ENST00000294008 K7EMT4 169 aa9.35□□□□□ -0.91
SLX4-201ENST00000294008 BEAN1Q3B7T3 259 aa9.35□□□□□ -0.91
SLX4-201ENST00000294008 COL4A6Q14031 1691 aa9.34□□□□□ -0.91
SLX4-201ENST00000294008 PLA2G2CQ5R387 149 aa9.34□□□□□ -0.91
SLX4-201ENST00000294008 FAM19A3Q7Z5A8 133 aa9.34□□□□□ -0.91
SLX4-201ENST00000294008 LINC00474Q9P2X8 69 aa9.34□□□□□ -0.91
SLX4-201ENST00000294008 PROK1P58294 105 aa9.34□□□□□ -0.91
SLX4-201ENST00000294008 SBSPONQ8IVN8 264 aa9.34□□□□□ -0.91
SLX4-201ENST00000294008 IGLV4-69A0A075B6H9 119 aa9.33□□□□□ -0.92
SLX4-201ENST00000294008 LST1O00453 97 aa9.33□□□□□ -0.92
SLX4-201ENST00000294008 SPANXB1Q9NS25 103 aaPredicted RBP9.33□□□□□ -0.92
SLX4-201ENST00000294008 DHRS4-AS1Q9P1J3 65 aa9.33□□□□□ -0.92
SLX4-201ENST00000294008 A0A0J9YXY3 114 aa9.33□□□□□ -0.92
SLX4-201ENST00000294008 SMIM9A6NGZ8 99 aa9.33□□□□□ -0.92
SLX4-201ENST00000294008 LINC00643Q86TS7 51 aa9.33□□□□□ -0.92
SLX4-201ENST00000294008 DEFB116Q30KQ4 102 aa9.33□□□□□ -0.92
SLX4-201ENST00000294008 BRCA1P38398 1863 aaKnown RBP9.33□□□□□ -0.92
SLX4-201ENST00000294008 WNK1Q9H4A3 2382 aa9.33□□□□□ -0.92
SLX4-201ENST00000294008 NRXN2Q9P2S2 1712 aa9.32□□□□□ -0.92
SLX4-201ENST00000294008 NCOR1P1Q9H4R4 102 aa9.32□□□□□ -0.92
SLX4-201ENST00000294008 C20orf203Q8NBC4 194 aa9.32□□□□□ -0.92
SLX4-201ENST00000294008 Q6ZQY7 126 aa9.32□□□□□ -0.92
SLX4-201ENST00000294008 H3BT86 120 aa9.32□□□□□ -0.92
SLX4-201ENST00000294008 Q6ZSR3 168 aa9.32□□□□□ -0.92
SLX4-201ENST00000294008 TRBV6-8A0A0A6YYG3 113 aa9.32□□□□□ -0.92
SLX4-201ENST00000294008 TRBV6-5A0A0K0K1A5 114 aa9.32□□□□□ -0.92
SLX4-201ENST00000294008 IGKV2D-30A0A075B6S6 120 aa9.31□□□□□ -0.92
SLX4-201ENST00000294008 IGKV2-30P06310 120 aa9.31□□□□□ -0.92
SLX4-201ENST00000294008 Q8N7P7 452 aa9.31□□□□□ -0.92
SLX4-201ENST00000294008 CREBBPQ92793 2442 aa9.31□□□□□ -0.92
SLX4-201ENST00000294008 THSD7AQ9UPZ6 1657 aa9.31□□□□□ -0.92
SLX4-201ENST00000294008 PLA2G5P39877 138 aa9.31□□□□□ -0.92
SLX4-201ENST00000294008 CDKN2A-AS1Q9UH64 79 aa9.31□□□□□ -0.92
SLX4-201ENST00000294008 U3KQA8 63 aa9.31□□□□□ -0.92
SLX4-201ENST00000294008 LCTP09848 1927 aa9.31□□□□□ -0.92
SLX4-201ENST00000294008 C19orf84I3L1E1 186 aa9.31□□□□□ -0.92
SLX4-201ENST00000294008 MT-ATP8P03928 68 aa9.31□□□□□ -0.92
SLX4-201ENST00000294008 LINC00208Q96KT6 92 aa9.31□□□□□ -0.92
SLX4-201ENST00000294008 DEFB114Q30KQ6 69 aa9.3□□□□□ -0.92
SLX4-201ENST00000294008 PIP4P1Q86T03 277 aa9.3□□□□□ -0.92
SLX4-201ENST00000294008 M0R378 163 aa9.3□□□□□ -0.92
SLX4-201ENST00000294008 PATE2Q6UY27 113 aa9.3□□□□□ -0.92
SLX4-201ENST00000294008 NEXN-AS1Q8NBZ9 246 aa9.3□□□□□ -0.92
SLX4-201ENST00000294008 SMR3AQ99954 134 aa9.3□□□□□ -0.92
SLX4-201ENST00000294008 TNRC6AQ8NDV7 1962 aaKnown RBP9.3□□□□□ -0.92
SLX4-201ENST00000294008 BRI3O95415 125 aa9.29□□□□□ -0.92
SLX4-201ENST00000294008 SOSTDC1Q6X4U4 206 aa9.29□□□□□ -0.92
SLX4-201ENST00000294008 CRIP2P52943 208 aaPredicted RBP9.29□□□□□ -0.92
SLX4-201ENST00000294008 PMAIP1Q13794 54 aa9.29□□□□□ -0.92
SLX4-201ENST00000294008 C7orf65Q6ZTY9 151 aa9.29□□□□□ -0.92
SLX4-201ENST00000294008 Q6YL49 198 aa9.29□□□□□ -0.92
SLX4-201ENST00000294008 LRRC37AA6NMS7 1700 aa9.29□□□□□ -0.92
SLX4-201ENST00000294008 C1orf134Q5TEV5 83 aa9.29□□□□□ -0.92
SLX4-201ENST00000294008 A8MZ25 164 aa9.28□□□□□ -0.92
SLX4-201ENST00000294008 C10orf99Q6UWK7 81 aa9.28□□□□□ -0.92
SLX4-201ENST00000294008 PRRC2AP48634 2157 aaKnown RBP9.28□□□□□ -0.92
SLX4-201ENST00000294008 CFAP126Q5VTH2 177 aa9.28□□□□□ -0.92
SLX4-201ENST00000294008 J3QL48 77 aa9.28□□□□□ -0.92
SLX4-201ENST00000294008 SCN10AQ9Y5Y9 1956 aa9.27□□□□□ -0.92
SLX4-201ENST00000294008 C2orf48Q96LS8 159 aa9.27□□□□□ -0.93
SLX4-201ENST00000294008 ZNF73O43830 326 aaPredicted RBP9.27□□□□□ -0.93
SLX4-201ENST00000294008 C6orf223Q8N319 242 aa9.27□□□□□ -0.93
SLX4-201ENST00000294008 C1orf195Q5TG92 126 aa9.27□□□□□ -0.93
SLX4-201ENST00000294008 KIAA1671Q9BY89 1806 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms