RNA–Protein interactions for RNA: ENST00000293922.1

PTX4-201, Transcript of pentraxin 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTX4, Length 1,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-201ENST00000293922 HIST1H2BBP33778 126 aa12.58□□□□□ -0.4
PTX4-201ENST00000293922 HIST1H2BDP58876 126 aa12.58□□□□□ -0.4
PTX4-201ENST00000293922 HIST1H2BCP62807 126 aa12.58□□□□□ -0.4
PTX4-201ENST00000293922 HIST2H2BEQ16778 126 aa12.58□□□□□ -0.4
PTX4-201ENST00000293922 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.58□□□□□ -0.4
PTX4-201ENST00000293922 DAZ4Q86SG3 579 aaKnown RBP12.58□□□□□ -0.4
PTX4-201ENST00000293922 HIST1H2BHQ93079 126 aa12.58□□□□□ -0.4
PTX4-201ENST00000293922 HIST1H2BNQ99877 126 aa12.58□□□□□ -0.4
PTX4-201ENST00000293922 HIST1H2BMQ99879 126 aa12.58□□□□□ -0.4
PTX4-201ENST00000293922 DAZ3Q9NR90 486 aaKnown RBP12.58□□□□□ -0.4
PTX4-201ENST00000293922 DYNC1H1Q14204 4646 aaKnown RBP12.58□□□□□ -0.4
PTX4-201ENST00000293922 VCYO14598 125 aa12.57□□□□□ -0.4
PTX4-201ENST00000293922 Q0VG73 95 aa12.57□□□□□ -0.4
PTX4-201ENST00000293922 SH2D6Q7Z4S9 175 aa12.57□□□□□ -0.4
PTX4-201ENST00000293922 LOC389332A0A1B0GUA5 103 aa12.56□□□□□ -0.4
PTX4-201ENST00000293922 IQCJQ1A5X6 159 aa12.56□□□□□ -0.4
PTX4-201ENST00000293922 ATP6V0E2Q8NHE4 81 aa12.56□□□□□ -0.4
PTX4-201ENST00000293922 NXT2Q9NPJ8 142 aaKnown RBP12.56□□□□□ -0.4
PTX4-201ENST00000293922 LINC00588Q9Y4M8 146 aa12.56□□□□□ -0.4
PTX4-201ENST00000293922 KIAA1109Q2LD37 5005 aa12.56□□□□□ -0.4
PTX4-201ENST00000293922 I3L3M4 83 aa12.55□□□□□ -0.4
PTX4-201ENST00000293922 PMCHP20382 165 aa12.55□□□□□ -0.4
PTX4-201ENST00000293922 NEGR1Q7Z3B1 354 aa12.55□□□□□ -0.4
PTX4-201ENST00000293922 Q8N8P6 123 aa12.55□□□□□ -0.4
PTX4-201ENST00000293922 A0A1B0GVY2 172 aa12.54□□□□□ -0.4
PTX4-201ENST00000293922 IFI27P40305 119 aaPredicted RBP12.54□□□□□ -0.4
PTX4-201ENST00000293922 CCL18P55774 89 aa12.54□□□□□ -0.4
PTX4-201ENST00000293922 RAB5BP61020 215 aa12.54□□□□□ -0.4
PTX4-201ENST00000293922 IGHV3-38A0A0C4DH36 116 aa12.54□□□□□ -0.4
PTX4-201ENST00000293922 PRSS3P2Q8NHM4 247 aa12.54□□□□□ -0.4
PTX4-201ENST00000293922 LINC01546A6NGU7 62 aa12.53□□□□□ -0.4
PTX4-201ENST00000293922 PRSS29PA6NIE9 313 aa12.53□□□□□ -0.4
PTX4-201ENST00000293922 TSHBP01222 138 aa12.53□□□□□ -0.4
PTX4-201ENST00000293922 KIR2DL4Q99706 377 aa12.53□□□□□ -0.4
PTX4-201ENST00000293922 GTSF1LQ9H1H1 148 aa12.53□□□□□ -0.4
PTX4-201ENST00000293922 K7EMI3 77 aa12.52□□□□□ -0.41
PTX4-201ENST00000293922 TCAPO15273 167 aa12.52□□□□□ -0.41
PTX4-201ENST00000293922 TIRAPP58753 221 aa12.52□□□□□ -0.41
PTX4-201ENST00000293922 COTL1Q14019 142 aa12.52□□□□□ -0.41
PTX4-201ENST00000293922 URB1-AS1Q96HZ7 61 aa12.52□□□□□ -0.41
PTX4-201ENST00000293922 TMEM97Q5BJF2 176 aa12.51□□□□□ -0.41
PTX4-201ENST00000293922 NIT1Q86X76 327 aa12.51□□□□□ -0.41
PTX4-201ENST00000293922 BAGE3Q86Y29 109 aa12.51□□□□□ -0.41
PTX4-201ENST00000293922 NBDYA0A0U1RRE5 68 aa12.5□□□□□ -0.41
PTX4-201ENST00000293922 LINC00614P0C842 121 aa12.5□□□□□ -0.41
PTX4-201ENST00000293922 C1orf134Q5TEV5 83 aa12.5□□□□□ -0.41
PTX4-201ENST00000293922 NTM-AS1Q6ZSK4 140 aa12.5□□□□□ -0.41
PTX4-201ENST00000293922 FA2HQ7L5A8 372 aa12.5□□□□□ -0.41
PTX4-201ENST00000293922 FCER1GP30273 86 aa12.49□□□□□ -0.41
PTX4-201ENST00000293922 ESRGQ1W209 222 aa12.49□□□□□ -0.41
PTX4-201ENST00000293922 COA6Q5JTJ3 125 aaKnown RBP12.49□□□□□ -0.41
PTX4-201ENST00000293922 LYPD5Q6UWN5 251 aa12.49□□□□□ -0.41
PTX4-201ENST00000293922 AP5S1Q9NUS5 200 aa12.49□□□□□ -0.41
PTX4-201ENST00000293922 TRBV6-8A0A0A6YYG3 113 aa12.48□□□□□ -0.41
PTX4-201ENST00000293922 LINC00310P59036 64 aa12.48□□□□□ -0.41
PTX4-201ENST00000293922 DEFB104AQ8WTQ1 72 aa12.48□□□□□ -0.41
PTX4-201ENST00000293922 CHCHD1Q96BP2 118 aaKnown RBP12.48□□□□□ -0.41
PTX4-201ENST00000293922 SERF1AO75920 110 aa12.47□□□□□ -0.41
PTX4-201ENST00000293922 LAGE3Q14657 143 aa12.47□□□□□ -0.41
PTX4-201ENST00000293922 ORMDL2Q53FV1 153 aa12.47□□□□□ -0.41
PTX4-201ENST00000293922 RNASEKQ6P5S7 137 aaKnown RBP12.47□□□□□ -0.41
PTX4-201ENST00000293922 Q9H8V8 135 aa12.47□□□□□ -0.41
PTX4-201ENST00000293922 IGHV1-24A0A0C4DH33 117 aa12.46□□□□□ -0.41
PTX4-201ENST00000293922 ESDP10768 282 aa12.46□□□□□ -0.41
PTX4-201ENST00000293922 AMTP48728 403 aa12.46□□□□□ -0.41
PTX4-201ENST00000293922 LELP1Q5T871 98 aa12.46□□□□□ -0.41
PTX4-201ENST00000293922 UPK3BQ9BT76 320 aa12.46□□□□□ -0.41
PTX4-201ENST00000293922 TRBV25-1A0A075B6N4 114 aa12.45□□□□□ -0.42
PTX4-201ENST00000293922 NDUFA6P56556 154 aa12.45□□□□□ -0.42
PTX4-201ENST00000293922 CHCHD7Q9BUK0 85 aa12.45□□□□□ -0.42
PTX4-201ENST00000293922 MRPS16Q9Y3D3 137 aaKnown RBP12.45□□□□□ -0.42
PTX4-201ENST00000293922 NUPR1O60356 82 aa12.44□□□□□ -0.42
PTX4-201ENST00000293922 C6orf223Q8N319 242 aa12.44□□□□□ -0.42
PTX4-201ENST00000293922 TMEM243Q9BU79 118 aa12.44□□□□□ -0.42
PTX4-201ENST00000293922 KRTAP1-5Q9BYS1 174 aa12.44□□□□□ -0.42
PTX4-201ENST00000293922 HSBP1O75506 76 aa12.43□□□□□ -0.42
PTX4-201ENST00000293922 C20orf203Q8NBC4 194 aa12.43□□□□□ -0.42
PTX4-201ENST00000293922 LRP1BQ9NZR2 4599 aa12.43□□□□□ -0.42
PTX4-201ENST00000293922 A0A096LNJ9 63 aa12.42□□□□□ -0.42
PTX4-201ENST00000293922 G0S2P27469 103 aa12.42□□□□□ -0.42
PTX4-201ENST00000293922 S100A6P06703 90 aa12.41□□□□□ -0.42
PTX4-201ENST00000293922 H7C423 109 aa12.4□□□□□ -0.42
PTX4-201ENST00000293922 TNP2Q05952 138 aa12.4□□□□□ -0.42
PTX4-201ENST00000293922 TTC32Q5I0X7 151 aa12.4□□□□□ -0.42
PTX4-201ENST00000293922 C2orf66Q6UXQ4 117 aa12.4□□□□□ -0.42
PTX4-201ENST00000293922 CHCHD5Q9BSY4 110 aa12.4□□□□□ -0.42
PTX4-201ENST00000293922 TMA7Q9Y2S6 64 aaKnown RBP12.4□□□□□ -0.42
PTX4-201ENST00000293922 RYR1P21817 5038 aa12.4□□□□□ -0.42
PTX4-201ENST00000293922 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.39□□□□□ -0.43
PTX4-201ENST00000293922 TRAV8-6A0A0B4J262 113 aa12.39□□□□□ -0.43
PTX4-201ENST00000293922 IGKV2-29A2NJV5 120 aaPredicted RBP12.39□□□□□ -0.43
PTX4-201ENST00000293922 HBDP02042 147 aa12.39□□□□□ -0.43
PTX4-201ENST00000293922 BTF3P20290 206 aaKnown RBP12.39□□□□□ -0.43
PTX4-201ENST00000293922 PMCHL1Q16048 86 aa12.39□□□□□ -0.43
PTX4-201ENST00000293922 TMEM18Q96B42 140 aa12.39□□□□□ -0.43
PTX4-201ENST00000293922 TOMM6Q96B49 74 aa12.39□□□□□ -0.43
PTX4-201ENST00000293922 CYSLTR1Q9Y271 337 aa12.39□□□□□ -0.43
PTX4-201ENST00000293922 LINC01549A6NIU2 74 aa12.38□□□□□ -0.43
PTX4-201ENST00000293922 RPL39P62891 51 aaKnown RBP12.38□□□□□ -0.43
PTX4-201ENST00000293922 DNAH5Q8TE73 4624 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms