RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 GAGE2BQ13066 116 aa14.84□□□□□ -0.03
TMED4-201ENST00000289577 GAGE2EQ4V326 116 aa14.84□□□□□ -0.03
TMED4-201ENST00000289577 PIK3CD-AS1Q5SR53 167 aa14.84□□□□□ -0.03
TMED4-201ENST00000289577 UBE2WQ96B02 151 aa14.84□□□□□ -0.03
TMED4-201ENST00000289577 GAGE2DQ9UEU5 116 aa14.84□□□□□ -0.03
TMED4-201ENST00000289577 TRAV4A0A0B4J268 109 aa14.84□□□□□ -0.03
TMED4-201ENST00000289577 A8MTW9 85 aa14.84□□□□□ -0.03
TMED4-201ENST00000289577 B4DSR2 109 aa14.84□□□□□ -0.03
TMED4-201ENST00000289577 H7C423 109 aa14.84□□□□□ -0.03
TMED4-201ENST00000289577 CRLF1O75462 422 aa14.84□□□□□ -0.03
TMED4-201ENST00000289577 TRAV8-4A0A0B4J246 113 aa14.83□□□□□ -0.04
TMED4-201ENST00000289577 DEFB112Q30KQ8 113 aa14.83□□□□□ -0.04
TMED4-201ENST00000289577 Q9UF83 564 aa14.83□□□□□ -0.04
TMED4-201ENST00000289577 H3BT86 120 aa14.82□□□□□ -0.04
TMED4-201ENST00000289577 TIMM17BO60830 172 aa14.82□□□□□ -0.04
TMED4-201ENST00000289577 Q6Q795 121 aa14.82□□□□□ -0.04
TMED4-201ENST00000289577 C2orf82Q6UX34 121 aa14.82□□□□□ -0.04
TMED4-201ENST00000289577 Q6ZSN1 163 aa14.82□□□□□ -0.04
TMED4-201ENST00000289577 A8MZ25 164 aa14.82□□□□□ -0.04
TMED4-201ENST00000289577 TMEM61Q8N0U2 210 aa14.82□□□□□ -0.04
TMED4-201ENST00000289577 DUX5Q96PT3 197 aa14.82□□□□□ -0.04
TMED4-201ENST00000289577 KNCNA6PVL3 124 aa14.81□□□□□ -0.04
TMED4-201ENST00000289577 COX6CP09669 75 aa14.81□□□□□ -0.04
TMED4-201ENST00000289577 HOXD3P31249 432 aaPredicted RBP14.81□□□□□ -0.04
TMED4-201ENST00000289577 YAE1D1Q9NRH1 226 aa14.81□□□□□ -0.04
TMED4-201ENST00000289577 NACAE9PAV3 2078 aa14.81□□□□□ -0.04
TMED4-201ENST00000289577 HTN1P15515 57 aa14.81□□□□□ -0.04
TMED4-201ENST00000289577 IFITM1P13164 125 aa14.8□□□□□ -0.04
TMED4-201ENST00000289577 NDUFV3P56181 108 aaKnown RBP14.8□□□□□ -0.04
TMED4-201ENST00000289577 GAGE5Q13069 117 aa14.8□□□□□ -0.04
TMED4-201ENST00000289577 GAGE6Q13070 117 aa14.8□□□□□ -0.04
TMED4-201ENST00000289577 Q6ZSV7 163 aa14.8□□□□□ -0.04
TMED4-201ENST00000289577 SORL1Q92673 2214 aa14.79□□□□□ -0.04
TMED4-201ENST00000289577 LST1O00453 97 aa14.79□□□□□ -0.04
TMED4-201ENST00000289577 LINC00467Q9BRT7 94 aa14.79□□□□□ -0.04
TMED4-201ENST00000289577 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.78□□□□□ -0.04
TMED4-201ENST00000289577 IGKV2-29A2NJV5 120 aaPredicted RBP14.78□□□□□ -0.04
TMED4-201ENST00000289577 RBMY1BA6NDE4 496 aaKnown RBP14.78□□□□□ -0.04
TMED4-201ENST00000289577 RBMY1EA6NEQ0 496 aaKnown RBP14.78□□□□□ -0.04
TMED4-201ENST00000289577 RBMY1DP0C7P1 496 aaKnown RBP14.78□□□□□ -0.04
TMED4-201ENST00000289577 DUX3Q96PT4 197 aa14.78□□□□□ -0.04
TMED4-201ENST00000289577 IGLV5-45A0A087WSX0 123 aa14.77□□□□□ -0.04
TMED4-201ENST00000289577 PRM2P04554 102 aa14.77□□□□□ -0.04
TMED4-201ENST00000289577 NPC2P61916 151 aa14.77□□□□□ -0.04
TMED4-201ENST00000289577 DEFB121Q5J5C9 76 aa14.77□□□□□ -0.04
TMED4-201ENST00000289577 CLEC2BQ92478 149 aa14.77□□□□□ -0.04
TMED4-201ENST00000289577 UBE2E2Q96LR5 201 aa14.77□□□□□ -0.04
TMED4-201ENST00000289577 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.77□□□□□ -0.041e-8■■■■■ 43.5
TMED4-201ENST00000289577 TIRAPP58753 221 aa14.77□□□□□ -0.05
TMED4-201ENST00000289577 DEFB131AP59861 70 aa14.77□□□□□ -0.05
TMED4-201ENST00000289577 ZNF415Q09FC8 603 aa14.77□□□□□ -0.05
TMED4-201ENST00000289577 C15orf53Q8NAA6 179 aa14.77□□□□□ -0.05
TMED4-201ENST00000289577 SVIPQ8NHG7 77 aa14.77□□□□□ -0.05
TMED4-201ENST00000289577 DNAJC30Q96LL9 226 aa14.77□□□□□ -0.05
TMED4-201ENST00000289577 COL12A1Q99715 3063 aa14.77□□□□□ -0.05
TMED4-201ENST00000289577 NDUFA1O15239 70 aa14.76□□□□□ -0.05
TMED4-201ENST00000289577 IGHV3-53P01767 116 aa14.75□□□□□ -0.05
TMED4-201ENST00000289577 MRPL23Q16540 153 aaKnown RBP14.75□□□□□ -0.05
TMED4-201ENST00000289577 CDKN2A-AS1Q9UH64 79 aa14.75□□□□□ -0.05
TMED4-201ENST00000289577 PRORYQ9H606 182 aa14.74□□□□□ -0.05
TMED4-201ENST00000289577 FAM240AA0A1B0GVK7 77 aa14.74□□□□□ -0.05
TMED4-201ENST00000289577 TTC32Q5I0X7 151 aa14.73□□□□□ -0.05
TMED4-201ENST00000289577 C11orf72Q8NBR9 251 aa14.73□□□□□ -0.05
TMED4-201ENST00000289577 TMEM101Q96IK0 257 aa14.73□□□□□ -0.05
TMED4-201ENST00000289577 CSPG4Q6UVK1 2322 aa14.73□□□□□ -0.05
TMED4-201ENST00000289577 BEAN1Q3B7T3 259 aa14.73□□□□□ -0.05
TMED4-201ENST00000289577 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.72□□□□□ -0.05
TMED4-201ENST00000289577 CITED2Q99967 270 aaPredicted RBP14.72□□□□□ -0.05
TMED4-201ENST00000289577 IGHV3-38A0A0C4DH36 116 aa14.72□□□□□ -0.05
TMED4-201ENST00000289577 ZNF702PQ9H963 129 aa14.72□□□□□ -0.05
TMED4-201ENST00000289577 DAND5Q8N907 189 aa14.71□□□□□ -0.05
TMED4-201ENST00000289577 VPREB3Q9UKI3 123 aa14.71□□□□□ -0.05
TMED4-201ENST00000289577 IGLV5-39A0A0G2JS06 123 aa14.7□□□□□ -0.06
TMED4-201ENST00000289577 RS1O15537 224 aa14.7□□□□□ -0.06
TMED4-201ENST00000289577 DSCR9P59020 149 aa14.7□□□□□ -0.06
TMED4-201ENST00000289577 LINC01356Q8N9X3 169 aa14.7□□□□□ -0.06
TMED4-201ENST00000289577 B5MCH6 92 aa14.69□□□□□ -0.06
TMED4-201ENST00000289577 SLURP1P55000 103 aa14.69□□□□□ -0.06
TMED4-201ENST00000289577 SS18L2Q9UHA2 77 aa14.69□□□□□ -0.06
TMED4-201ENST00000289577 GAGE12JA6NER3 117 aa14.69□□□□□ -0.06
TMED4-201ENST00000289577 GAGE7O76087 117 aa14.69□□□□□ -0.06
TMED4-201ENST00000289577 GAGE12FP0CL80 117 aa14.69□□□□□ -0.06
TMED4-201ENST00000289577 GAGE12GP0CL81 117 aa14.69□□□□□ -0.06
TMED4-201ENST00000289577 GAGE12IP0CL82 117 aa14.69□□□□□ -0.06
TMED4-201ENST00000289577 COX6A2Q02221 97 aa14.69□□□□□ -0.06
TMED4-201ENST00000289577 GAGE4Q13068 117 aa14.69□□□□□ -0.06
TMED4-201ENST00000289577 CIRBPQ14011 172 aaKnown RBP14.69□□□□□ -0.06
TMED4-201ENST00000289577 LINC00308Q8TCZ7 52 aa14.68□□□□□ -0.06
TMED4-201ENST00000289577 IGHV3OR16-12A0A075B7B8 117 aa14.68□□□□□ -0.06
TMED4-201ENST00000289577 LINC01587Q99440 93 aa14.68□□□□□ -0.06
TMED4-201ENST00000289577 J3QLI3 93 aa14.67□□□□□ -0.06
TMED4-201ENST00000289577 FAM19A3Q7Z5A8 133 aa14.66□□□□□ -0.06
TMED4-201ENST00000289577 CCDC179H3BU77 68 aa14.66□□□□□ -0.06
TMED4-201ENST00000289577 HERVK_113P63121 156 aa14.66□□□□□ -0.06
TMED4-201ENST00000289577 DEFB136Q30KP8 78 aa14.66□□□□□ -0.06
TMED4-201ENST00000289577 C18orf65Q6ZTR6 163 aa14.66□□□□□ -0.06
TMED4-201ENST00000289577 CRYBG3Q68DQ2 2970 aa14.65□□□□□ -0.06
TMED4-201ENST00000289577 LINC00242Q5T6M2 205 aa14.65□□□□□ -0.06
TMED4-201ENST00000289577 DGAT2L7PQ6IED9 249 aa14.65□□□□□ -0.06
TMED4-201ENST00000289577 Q9H8V8 135 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms