RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 C19orf73Q9NVV2 129 aa6.23□□□□□ -1.41
PTPDC1-201ENST00000288976 PFN1P07737 140 aaKnown RBP6.23□□□□□ -1.41
PTPDC1-201ENST00000288976 OSTCQ9NRP0 149 aa6.23□□□□□ -1.41
PTPDC1-201ENST00000288976 PRAC2D3DTV9 90 aa6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 CAMK2N2Q96S95 79 aa6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 SNHG12Q9BXW3 62 aa6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 TP53TG1Q9Y2A0 90 aa6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 A0A1B0GWB2 263 aa6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 hDV102S1A0JD36 115 aa6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 COLCA2A8K830 154 aa6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 A8MZ25 164 aa6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 LECT2O14960 151 aa6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 C4orf48Q5BLP8 95 aa6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 ATP6V0E2Q8NHE4 81 aa6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 C20orf144Q9BQM9 153 aa6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 ICOSQ9Y6W8 199 aa6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 A0A1B0GW15 77 aa6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 ZNF124Q15973 351 aa6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 FAM231DQ6ZW35 169 aa6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 TRPT1Q86TN4 253 aaKnown RBP6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 IL17DQ8TAD2 202 aa6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 DEFB131BA0A096LNP1 70 aa6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 UBE2CO00762 179 aa6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 IGLV2-8P01709 118 aa6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 LINC00467Q9BRT7 94 aa6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 AGPAT4-IT1Q9H0P7 198 aa6.22□□□□□ -1.41
PTPDC1-201ENST00000288976 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.21□□□□□ -1.41
PTPDC1-201ENST00000288976 IGKV2-29A2NJV5 120 aaPredicted RBP6.21□□□□□ -1.41
PTPDC1-201ENST00000288976 GHRHP01286 108 aa6.21□□□□□ -1.41
PTPDC1-201ENST00000288976 ZC2HC1BQ5TFG8 222 aa6.21□□□□□ -1.41
PTPDC1-201ENST00000288976 NIT1Q86X76 327 aa6.21□□□□□ -1.41
PTPDC1-201ENST00000288976 PYGO2Q9BRQ0 406 aa6.21□□□□□ -1.41
PTPDC1-201ENST00000288976 FBN1P35555 2871 aaKnown RBP6.21□□□□□ -1.41
PTPDC1-201ENST00000288976 TIMM21Q9BVV7 248 aa6.21□□□□□ -1.42
PTPDC1-201ENST00000288976 KLLNB2CW77 178 aa6.21□□□□□ -1.42
PTPDC1-201ENST00000288976 M0R2P5 195 aa6.21□□□□□ -1.42
PTPDC1-201ENST00000288976 LINC01551Q86U37 167 aa6.21□□□□□ -1.42
PTPDC1-201ENST00000288976 UQCR10Q9UDW1 63 aa6.2□□□□□ -1.42
PTPDC1-201ENST00000288976 A0A087WWC5 75 aa6.2□□□□□ -1.42
PTPDC1-201ENST00000288976 TRAV26-1A0A087WT03 109 aa6.2□□□□□ -1.42
PTPDC1-201ENST00000288976 CT83Q5H943 113 aa6.2□□□□□ -1.42
PTPDC1-201ENST00000288976 CXCL1P09341 107 aa6.2□□□□□ -1.42
PTPDC1-201ENST00000288976 C2orf66Q6UXQ4 117 aa6.2□□□□□ -1.42
PTPDC1-201ENST00000288976 NUP35Q8NFH5 326 aa6.19□□□□□ -1.42
PTPDC1-201ENST00000288976 CHAC1Q9BUX1 264 aa6.19□□□□□ -1.42
PTPDC1-201ENST00000288976 WFDC10AQ9H1F0 79 aa6.19□□□□□ -1.42
PTPDC1-201ENST00000288976 KIR2DL5BA0A0G2JN68 375 aa6.19□□□□□ -1.42
PTPDC1-201ENST00000288976 KIR2DL5BA0A0G2JPC4 375 aa6.19□□□□□ -1.42
PTPDC1-201ENST00000288976 C19orf71A6NCJ1 209 aa6.19□□□□□ -1.42
PTPDC1-201ENST00000288976 K7EN84 100 aa6.19□□□□□ -1.42
PTPDC1-201ENST00000288976 PCP4P48539 62 aa6.19□□□□□ -1.42
PTPDC1-201ENST00000288976 GDF5OSQ5U4N7 250 aa6.19□□□□□ -1.42
PTPDC1-201ENST00000288976 FAM222AQ5U5X8 452 aa6.19□□□□□ -1.42
PTPDC1-201ENST00000288976 KIR2DL5AQ8N109 375 aa6.19□□□□□ -1.42
PTPDC1-201ENST00000288976 KIR2DL5BQ8NHK3 375 aa6.19□□□□□ -1.42
PTPDC1-201ENST00000288976 HHLA3Q9XRX5 114 aa6.19□□□□□ -1.42
PTPDC1-201ENST00000288976 NIPBLQ6KC79 2804 aaeCLIP6.19□□□□□ -1.42
PTPDC1-201ENST00000288976 Q8N1Y9 231 aa6.19□□□□□ -1.42
PTPDC1-201ENST00000288976 ZFAND2AQ8N6M9 145 aa6.19□□□□□ -1.42
PTPDC1-201ENST00000288976 TNFRSF6BO95407 300 aa6.18□□□□□ -1.42
PTPDC1-201ENST00000288976 IGKCP01834 107 aa6.18□□□□□ -1.42
PTPDC1-201ENST00000288976 TIRAPP58753 221 aa6.18□□□□□ -1.42
PTPDC1-201ENST00000288976 ZNF493Q6ZR52 646 aa6.18□□□□□ -1.42
PTPDC1-201ENST00000288976 ZC2HC1AQ96GY0 325 aa6.18□□□□□ -1.42
PTPDC1-201ENST00000288976 VSIG2Q96IQ7 327 aa6.18□□□□□ -1.42
PTPDC1-201ENST00000288976 NDUFAF3Q9BU61 184 aa6.18□□□□□ -1.42
PTPDC1-201ENST00000288976 TM2D2Q9BX73 214 aa6.18□□□□□ -1.42
PTPDC1-201ENST00000288976 AGRNO00468 2067 aa6.18□□□□□ -1.42
PTPDC1-201ENST00000288976 KRTAP10-11P60412 298 aa6.18□□□□□ -1.42
PTPDC1-201ENST00000288976 BOD1L2Q8IYS8 172 aa6.18□□□□□ -1.42
PTPDC1-201ENST00000288976 SMIM2Q9BVW6 85 aa6.18□□□□□ -1.42
PTPDC1-201ENST00000288976 SCRT2Q9NQ03 307 aa6.18□□□□□ -1.42
PTPDC1-201ENST00000288976 MYMXA0A1B0GTQ4 84 aa6.18□□□□□ -1.42
PTPDC1-201ENST00000288976 LINC01559Q495D7 138 aa6.18□□□□□ -1.42
PTPDC1-201ENST00000288976 GFRA4Q9GZZ7 299 aa6.18□□□□□ -1.42
PTPDC1-201ENST00000288976 SPATA25Q9BR10 227 aa6.18□□□□□ -1.42
PTPDC1-201ENST00000288976 PYY3Q5JQD4 70 aa6.17□□□□□ -1.42
PTPDC1-201ENST00000288976 IGHV1-24A0A0C4DH33 117 aa6.17□□□□□ -1.42
PTPDC1-201ENST00000288976 FAM231BA6NCW3 169 aa6.17□□□□□ -1.42
PTPDC1-201ENST00000288976 TP53TG3Q9ULZ0 132 aa6.17□□□□□ -1.42
PTPDC1-201ENST00000288976 I3L3M4 83 aa6.17□□□□□ -1.42
PTPDC1-201ENST00000288976 LEPROTO15243 131 aa6.17□□□□□ -1.42
PTPDC1-201ENST00000288976 LINC00322Q6ZN03 302 aaPredicted RBP6.17□□□□□ -1.42
PTPDC1-201ENST00000288976 ERG28Q9UKR5 140 aa6.17□□□□□ -1.42
PTPDC1-201ENST00000288976 TRAV8-3A0A0A6YYJ7 113 aa6.16□□□□□ -1.42
PTPDC1-201ENST00000288976 MED14OSP0DP75 135 aa6.16□□□□□ -1.42
PTPDC1-201ENST00000288976 UBE2AP49459 152 aa6.16□□□□□ -1.42
PTPDC1-201ENST00000288976 HIGD2BQ4VC39 106 aa6.16□□□□□ -1.42
PTPDC1-201ENST00000288976 TRAV9-1A0A075B6T8 112 aa6.16□□□□□ -1.42
PTPDC1-201ENST00000288976 TMEM238C9JI98 176 aa6.16□□□□□ -1.42
PTPDC1-201ENST00000288976 NDUFS5O43920 106 aa6.16□□□□□ -1.42
PTPDC1-201ENST00000288976 TENM1Q9UKZ4 2725 aa6.16□□□□□ -1.42
PTPDC1-201ENST00000288976 H3BUT2 72 aa6.16□□□□□ -1.42
PTPDC1-201ENST00000288976 HIST1H4AP62805 103 aaKnown RBP6.16□□□□□ -1.42
PTPDC1-201ENST00000288976 TDRG1Q3Y452 100 aa6.16□□□□□ -1.42
PTPDC1-201ENST00000288976 PLEKHB2Q96CS7 222 aa6.16□□□□□ -1.42
PTPDC1-201ENST00000288976 ETDCA0A1B0GVM5 59 aa6.15□□□□□ -1.42
PTPDC1-201ENST00000288976 G3V4G9 280 aa6.15□□□□□ -1.42
PTPDC1-201ENST00000288976 V9GYV3 84 aa6.15□□□□□ -1.42
PTPDC1-201ENST00000288976 CRIP1P50238 77 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms