RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 TOMM6Q96B49 74 aa10.27□□□□□ -0.77
LPCAT1-201ENST00000283415 M0R2P5 195 aa10.27□□□□□ -0.77
LPCAT1-201ENST00000283415 MUSTN1Q8IVN3 82 aa10.27□□□□□ -0.77
LPCAT1-201ENST00000283415 POM121L12Q8N7R1 296 aa10.27□□□□□ -0.77
LPCAT1-201ENST00000283415 E9PLD3 99 aa10.26□□□□□ -0.77
LPCAT1-201ENST00000283415 SLC25A20O43772 301 aa10.26□□□□□ -0.77
LPCAT1-201ENST00000283415 WFDC11Q8NEX6 87 aa10.26□□□□□ -0.77
LPCAT1-201ENST00000283415 CIRBPQ14011 172 aaKnown RBP10.26□□□□□ -0.77
LPCAT1-201ENST00000283415 SPANXB1Q9NS25 103 aaPredicted RBP10.26□□□□□ -0.77
LPCAT1-201ENST00000283415 LINC01619G3V211 115 aa10.25□□□□□ -0.77
LPCAT1-201ENST00000283415 GAGE7O76087 117 aa10.25□□□□□ -0.77
LPCAT1-201ENST00000283415 GAGE12FP0CL80 117 aa10.25□□□□□ -0.77
LPCAT1-201ENST00000283415 GAGE12GP0CL81 117 aa10.25□□□□□ -0.77
LPCAT1-201ENST00000283415 GAGE12IP0CL82 117 aa10.25□□□□□ -0.77
LPCAT1-201ENST00000283415 DSCR9P59020 149 aa10.25□□□□□ -0.77
LPCAT1-201ENST00000283415 GAGE2BQ13066 116 aa10.25□□□□□ -0.77
LPCAT1-201ENST00000283415 GAGE2EQ4V326 116 aa10.25□□□□□ -0.77
LPCAT1-201ENST00000283415 GAGE2DQ9UEU5 116 aa10.25□□□□□ -0.77
LPCAT1-201ENST00000283415 RS1O15537 224 aa10.25□□□□□ -0.77
LPCAT1-201ENST00000283415 TSPAN13O95857 204 aa10.25□□□□□ -0.77
LPCAT1-201ENST00000283415 RNASE3P12724 160 aaKnown RBP10.25□□□□□ -0.77
LPCAT1-201ENST00000283415 NDUFA12Q9UI09 145 aa10.25□□□□□ -0.77
LPCAT1-201ENST00000283415 C3orf56Q8N813 242 aa10.25□□□□□ -0.77
LPCAT1-201ENST00000283415 TM2D2Q9BX73 214 aa10.25□□□□□ -0.77
LPCAT1-201ENST00000283415 TRGV4A0A0C4DH28 118 aa10.24□□□□□ -0.77
LPCAT1-201ENST00000283415 TAL2Q16559 108 aa10.24□□□□□ -0.77
LPCAT1-201ENST00000283415 ESM1Q9NQ30 184 aa10.24□□□□□ -0.77
LPCAT1-201ENST00000283415 CELSR2Q9HCU4 2923 aa10.24□□□□□ -0.77
LPCAT1-201ENST00000283415 TCL1BO95988 128 aa10.24□□□□□ -0.77
LPCAT1-201ENST00000283415 NEXN-AS1Q8NBZ9 246 aa10.24□□□□□ -0.77
LPCAT1-201ENST00000283415 LENEPQ9Y5L5 61 aa10.24□□□□□ -0.77
LPCAT1-201ENST00000283415 MT-ATP8P03928 68 aa10.24□□□□□ -0.77
LPCAT1-201ENST00000283415 PPDPFLQ8WWR9 84 aa10.24□□□□□ -0.77
LPCAT1-201ENST00000283415 GCN1Q92616 2671 aaKnown RBP10.23□□□□□ -0.77
LPCAT1-201ENST00000283415 TRAV8-4A0A0B4J246 113 aa10.23□□□□□ -0.77
LPCAT1-201ENST00000283415 I3L3M4 83 aa10.23□□□□□ -0.77
LPCAT1-201ENST00000283415 FOXI1Q12951 378 aa10.23□□□□□ -0.77
LPCAT1-201ENST00000283415 ZFAND6Q6FIF0 208 aa10.23□□□□□ -0.77
LPCAT1-201ENST00000283415 A0A0J9YX75 114 aa10.23□□□□□ -0.77
LPCAT1-201ENST00000283415 ANKRD29Q8N6D5 301 aa10.23□□□□□ -0.77
LPCAT1-201ENST00000283415 CHCHD5Q9BSY4 110 aa10.23□□□□□ -0.77
LPCAT1-201ENST00000283415 ZNF580Q9UK33 172 aa10.23□□□□□ -0.77
LPCAT1-201ENST00000283415 ZNF415Q09FC8 603 aa10.22□□□□□ -0.77
LPCAT1-201ENST00000283415 BBC3Q96PG8 261 aaPredicted RBP10.22□□□□□ -0.77
LPCAT1-201ENST00000283415 GATA3P23771 443 aa10.22□□□□□ -0.77
LPCAT1-201ENST00000283415 CFC1BP0CG36 223 aa10.22□□□□□ -0.77
LPCAT1-201ENST00000283415 CFC1P0CG37 223 aa10.22□□□□□ -0.77
LPCAT1-201ENST00000283415 CLPSL2Q6UWE3 100 aa10.21□□□□□ -0.77
LPCAT1-201ENST00000283415 WFDC10AQ9H1F0 79 aa10.21□□□□□ -0.77
LPCAT1-201ENST00000283415 NOP10Q9NPE3 64 aaKnown RBP10.21□□□□□ -0.77
LPCAT1-201ENST00000283415 TRAV26-1A0A087WT03 109 aa10.21□□□□□ -0.78
LPCAT1-201ENST00000283415 C1QTNF4Q9BXJ3 329 aa10.21□□□□□ -0.78
LPCAT1-201ENST00000283415 DEFB113Q30KQ7 82 aa10.21□□□□□ -0.78
LPCAT1-201ENST00000283415 PRIMA1Q86XR5 153 aa10.21□□□□□ -0.78
LPCAT1-201ENST00000283415 UBR5O95071 2799 aaPredicted RBP10.2□□□□□ -0.78
LPCAT1-201ENST00000283415 NDUFA11Q86Y39 141 aa10.2□□□□□ -0.78
LPCAT1-201ENST00000283415 C10orf126Q8N4M7 172 aa10.2□□□□□ -0.78
LPCAT1-201ENST00000283415 TMEM141Q96I45 108 aa10.2□□□□□ -0.78
LPCAT1-201ENST00000283415 NXPH4O95158 308 aa10.2□□□□□ -0.78
LPCAT1-201ENST00000283415 INSP01308 110 aa10.2□□□□□ -0.78
LPCAT1-201ENST00000283415 ELANEP08246 267 aa10.2□□□□□ -0.78
LPCAT1-201ENST00000283415 TRAV12-1A0A0B4J245 112 aa10.2□□□□□ -0.78
LPCAT1-201ENST00000283415 H3BUA1 57 aa10.2□□□□□ -0.78
LPCAT1-201ENST00000283415 CLEC2BQ92478 149 aa10.2□□□□□ -0.78
LPCAT1-201ENST00000283415 CSMD2Q7Z408 3487 aa10.2□□□□□ -0.78
LPCAT1-201ENST00000283415 DEFB4AO15263 64 aa10.19□□□□□ -0.78
LPCAT1-201ENST00000283415 ATXN8Q156A1 80 aa10.19□□□□□ -0.78
LPCAT1-201ENST00000283415 TRBV7-9A0A0J9YWB2 115 aa10.19□□□□□ -0.78
LPCAT1-201ENST00000283415 A0A0J9YY99 117 aa10.19□□□□□ -0.78
LPCAT1-201ENST00000283415 B5MCH6 92 aa10.19□□□□□ -0.78
LPCAT1-201ENST00000283415 IGLV1-40P01703 118 aa10.19□□□□□ -0.78
LPCAT1-201ENST00000283415 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.18□□□□□ -0.78
LPCAT1-201ENST00000283415 MED14OSP0DP75 135 aa10.18□□□□□ -0.78
LPCAT1-201ENST00000283415 CITED2Q99967 270 aaPredicted RBP10.18□□□□□ -0.78
LPCAT1-201ENST00000283415 SS18L2Q9UHA2 77 aa10.18□□□□□ -0.78
LPCAT1-201ENST00000283415 MAST4O15021 2626 aa10.18□□□□□ -0.78
LPCAT1-201ENST00000283415 ITPR2Q14571 2701 aa10.18□□□□□ -0.78
LPCAT1-201ENST00000283415 TRBV7-3A0A075B6L6 115 aa10.17□□□□□ -0.78
LPCAT1-201ENST00000283415 Q6ZSV7 163 aa10.17□□□□□ -0.78
LPCAT1-201ENST00000283415 F8P00451 2351 aa10.17□□□□□ -0.78
LPCAT1-201ENST00000283415 CCL24O00175 119 aa10.17□□□□□ -0.78
LPCAT1-201ENST00000283415 PSMB8P28062 276 aa10.17□□□□□ -0.78
LPCAT1-201ENST00000283415 TSPEAR-AS2P59090 65 aa10.17□□□□□ -0.78
LPCAT1-201ENST00000283415 DCANP1Q8TF63 244 aa10.17□□□□□ -0.78
LPCAT1-201ENST00000283415 K7EQG2 157 aa10.17□□□□□ -0.78
LPCAT1-201ENST00000283415 LINC00158P58513 81 aa10.17□□□□□ -0.78
LPCAT1-201ENST00000283415 GAGE6Q13070 117 aa10.17□□□□□ -0.78
LPCAT1-201ENST00000283415 IGHV4-31P0DP07 118 aa10.16□□□□□ -0.78
LPCAT1-201ENST00000283415 RPL36AP83881 106 aaKnown RBP10.16□□□□□ -0.78
LPCAT1-201ENST00000283415 TEN1Q86WV5 123 aa10.16□□□□□ -0.78
LPCAT1-201ENST00000283415 RPL36ALQ969Q0 106 aaKnown RBP10.16□□□□□ -0.78
LPCAT1-201ENST00000283415 DNAL4O96015 105 aa10.16□□□□□ -0.78
LPCAT1-201ENST00000283415 PFN2P35080 140 aa10.16□□□□□ -0.78
LPCAT1-201ENST00000283415 MGAM2Q2M2H8 2515 aa10.16□□□□□ -0.78
LPCAT1-201ENST00000283415 Q9UF83 564 aa10.16□□□□□ -0.78
LPCAT1-201ENST00000283415 MORN3Q6PF18 240 aaPredicted RBP10.16□□□□□ -0.78
LPCAT1-201ENST00000283415 CARD19Q96LW7 228 aa10.16□□□□□ -0.78
LPCAT1-201ENST00000283415 IGHV3-30-3P0DP02 117 aa10.15□□□□□ -0.78
LPCAT1-201ENST00000283415 LINC00315P59091 139 aa10.15□□□□□ -0.78
LPCAT1-201ENST00000283415 KIF25-AS1Q9Y6Z4 181 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms