RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 SDHAF1A6NFY7 115 aa7.67□□□□□ -1.18
UPF3B-201ENST00000276201 J3QQQ9 107 aa7.67□□□□□ -1.18
UPF3B-201ENST00000276201 SLC25A20O43772 301 aa7.67□□□□□ -1.18
UPF3B-201ENST00000276201 MGPP08493 103 aa7.67□□□□□ -1.18
UPF3B-201ENST00000276201 GAGE5Q13069 117 aa7.67□□□□□ -1.18
UPF3B-201ENST00000276201 GAGE6Q13070 117 aa7.67□□□□□ -1.18
UPF3B-201ENST00000276201 NSUN5P1Q3KNT7 163 aa7.67□□□□□ -1.18
UPF3B-201ENST00000276201 IGHV3-66A0A0C4DH42 116 aa7.67□□□□□ -1.18
UPF3B-201ENST00000276201 PROK1P58294 105 aa7.67□□□□□ -1.18
UPF3B-201ENST00000276201 TSPEAR-AS2P59090 65 aa7.67□□□□□ -1.18
UPF3B-201ENST00000276201 KIR2DL4Q99706 377 aa7.67□□□□□ -1.18
UPF3B-201ENST00000276201 ZNF702PQ9H963 129 aa7.67□□□□□ -1.18
UPF3B-201ENST00000276201 TMEM223A0PJW6 202 aa7.66□□□□□ -1.18
UPF3B-201ENST00000276201 H3BUA1 57 aa7.66□□□□□ -1.18
UPF3B-201ENST00000276201 KRTAP10-3P60369 221 aa7.66□□□□□ -1.18
UPF3B-201ENST00000276201 Q6ZS46 218 aa7.66□□□□□ -1.18
UPF3B-201ENST00000276201 ANAPC13Q9BS18 74 aa7.66□□□□□ -1.18
UPF3B-201ENST00000276201 MUC4Q99102 2169 aa7.66□□□□□ -1.18
UPF3B-201ENST00000276201 KLLNB2CW77 178 aa7.66□□□□□ -1.18
UPF3B-201ENST00000276201 IGF1P05019 195 aa7.66□□□□□ -1.18
UPF3B-201ENST00000276201 LGALS3P17931 250 aaKnown RBP7.66□□□□□ -1.18
UPF3B-201ENST00000276201 Q8N2B8 174 aa7.66□□□□□ -1.18
UPF3B-201ENST00000276201 C5orf56Q8N8D9 126 aa7.66□□□□□ -1.18
UPF3B-201ENST00000276201 ODF3Q96PU9 254 aa7.66□□□□□ -1.18
UPF3B-201ENST00000276201 MDFICQ9P1T7 246 aa7.66□□□□□ -1.18
UPF3B-201ENST00000276201 TRBV30A0A0K0K1B3 111 aa7.65□□□□□ -1.18
UPF3B-201ENST00000276201 BLCAPP62952 87 aa7.65□□□□□ -1.18
UPF3B-201ENST00000276201 ATXN8Q156A1 80 aa7.65□□□□□ -1.18
UPF3B-201ENST00000276201 ZNRF2Q8NHG8 242 aa7.65□□□□□ -1.18
UPF3B-201ENST00000276201 M0R2P5 195 aa7.64□□□□□ -1.19
UPF3B-201ENST00000276201 RNASE4P34096 147 aaKnown RBP7.64□□□□□ -1.19
UPF3B-201ENST00000276201 SUMO4Q6EEV6 95 aa7.64□□□□□ -1.19
UPF3B-201ENST00000276201 SHISA2Q6UWI4 295 aa7.64□□□□□ -1.19
UPF3B-201ENST00000276201 G3V318 75 aa7.64□□□□□ -1.19
UPF3B-201ENST00000276201 TRAV41A0A0B4J266 112 aa7.63□□□□□ -1.19
UPF3B-201ENST00000276201 TRBV10-2A0A0K0K1G8 114 aa7.63□□□□□ -1.19
UPF3B-201ENST00000276201 A4D1N5 150 aa7.63□□□□□ -1.19
UPF3B-201ENST00000276201 LINC01548A6NM66 108 aa7.63□□□□□ -1.19
UPF3B-201ENST00000276201 EIF4EBP3O60516 100 aaPredicted RBP7.63□□□□□ -1.19
UPF3B-201ENST00000276201 NHLRC4P0CG21 123 aaPredicted RBP7.63□□□□□ -1.19
UPF3B-201ENST00000276201 ARL3P36405 182 aa7.63□□□□□ -1.19
UPF3B-201ENST00000276201 EDA2RQ9HAV5 297 aa7.63□□□□□ -1.19
UPF3B-201ENST00000276201 MOB4Q9Y3A3 225 aa7.63□□□□□ -1.19
UPF3B-201ENST00000276201 IGHV3OR16-13A0A075B7E8 117 aa7.63□□□□□ -1.19
UPF3B-201ENST00000276201 IGHV3-74A0A0B4J1X5 117 aa7.63□□□□□ -1.19
UPF3B-201ENST00000276201 GNRH2O43555 120 aa7.63□□□□□ -1.19
UPF3B-201ENST00000276201 TMEM95Q3KNT9 176 aa7.63□□□□□ -1.19
UPF3B-201ENST00000276201 LINC01620Q4KN68 170 aa7.63□□□□□ -1.19
UPF3B-201ENST00000276201 DEFB121Q5J5C9 76 aa7.63□□□□□ -1.19
UPF3B-201ENST00000276201 USMG5Q96IX5 58 aa7.63□□□□□ -1.19
UPF3B-201ENST00000276201 C9orf85Q96MD7 179 aa7.63□□□□□ -1.19
UPF3B-201ENST00000276201 IGHV3-49A0A0A0MS15 119 aa7.62□□□□□ -1.19
UPF3B-201ENST00000276201 FAM240AA0A1B0GVK7 77 aa7.62□□□□□ -1.19
UPF3B-201ENST00000276201 C9JAW5 83 aa7.62□□□□□ -1.19
UPF3B-201ENST00000276201 GAGE2BQ13066 116 aa7.62□□□□□ -1.19
UPF3B-201ENST00000276201 GAGE2EQ4V326 116 aa7.62□□□□□ -1.19
UPF3B-201ENST00000276201 TMEM170BQ5T4T1 132 aa7.62□□□□□ -1.19
UPF3B-201ENST00000276201 GAGE2DQ9UEU5 116 aa7.62□□□□□ -1.19
UPF3B-201ENST00000276201 SNCGO76070 127 aa7.62□□□□□ -1.19
UPF3B-201ENST00000276201 Q8N1Y9 231 aa7.62□□□□□ -1.19
UPF3B-201ENST00000276201 H3BT86 120 aa7.61□□□□□ -1.19
UPF3B-201ENST00000276201 NDUFV3P56181 108 aaKnown RBP7.61□□□□□ -1.19
UPF3B-201ENST00000276201 SPANXDQ9BXN6 97 aa7.61□□□□□ -1.19
UPF3B-201ENST00000276201 SPANXCQ9NY87 97 aa7.61□□□□□ -1.19
UPF3B-201ENST00000276201 PYGO1Q9Y3Y4 419 aa7.61□□□□□ -1.19
UPF3B-201ENST00000276201 ZNF22P17026 224 aaPredicted RBP7.61□□□□□ -1.19
UPF3B-201ENST00000276201 RPL39P62891 51 aaKnown RBP7.61□□□□□ -1.19
UPF3B-201ENST00000276201 TRPT1Q86TN4 253 aaKnown RBP7.61□□□□□ -1.19
UPF3B-201ENST00000276201 RNF152Q8N8N0 203 aa7.61□□□□□ -1.19
UPF3B-201ENST00000276201 ZNF256Q9Y2P7 627 aaPredicted RBP7.61□□□□□ -1.19
UPF3B-201ENST00000276201 K7EMT4 169 aa7.6□□□□□ -1.19
UPF3B-201ENST00000276201 HIST2H2BDQ6DRA6 164 aa7.6□□□□□ -1.19
UPF3B-201ENST00000276201 SFTA2Q6UW10 78 aa7.6□□□□□ -1.19
UPF3B-201ENST00000276201 FAM159AQ6UWV7 190 aa7.6□□□□□ -1.19
UPF3B-201ENST00000276201 MUSTN1Q8IVN3 82 aa7.6□□□□□ -1.19
UPF3B-201ENST00000276201 M0QY20 66 aa7.6□□□□□ -1.19
UPF3B-201ENST00000276201 C20orf203Q8NBC4 194 aa7.6□□□□□ -1.19
UPF3B-201ENST00000276201 TRAV8-4A0A0B4J246 113 aa7.59□□□□□ -1.19
UPF3B-201ENST00000276201 GAGE12JA6NER3 117 aa7.59□□□□□ -1.19
UPF3B-201ENST00000276201 GAGE7O76087 117 aa7.59□□□□□ -1.19
UPF3B-201ENST00000276201 GAGE12FP0CL80 117 aa7.59□□□□□ -1.19
UPF3B-201ENST00000276201 GAGE12GP0CL81 117 aa7.59□□□□□ -1.19
UPF3B-201ENST00000276201 GAGE12IP0CL82 117 aa7.59□□□□□ -1.19
UPF3B-201ENST00000276201 IFITM1P13164 125 aa7.59□□□□□ -1.19
UPF3B-201ENST00000276201 ID1P41134 155 aa7.59□□□□□ -1.19
UPF3B-201ENST00000276201 GAGE4Q13068 117 aa7.59□□□□□ -1.19
UPF3B-201ENST00000276201 UNQ9165/PRO28630Q6UXU0 137 aa7.59□□□□□ -1.19
UPF3B-201ENST00000276201 C11orf44Q8N8P7 122 aa7.59□□□□□ -1.19
UPF3B-201ENST00000276201 NTN5Q8WTR8 489 aaPredicted RBP7.59□□□□□ -1.19
UPF3B-201ENST00000276201 FBN3Q75N90 2809 aa7.59□□□□□ -1.19
UPF3B-201ENST00000276201 A0A0J9YXY3 114 aa7.59□□□□□ -1.2
UPF3B-201ENST00000276201 LITAFQ99732 161 aa7.59□□□□□ -1.2
UPF3B-201ENST00000276201 IGHV3-16A0A0C4DH30 117 aa7.58□□□□□ -1.2
UPF3B-201ENST00000276201 H3BMM0 161 aa7.58□□□□□ -1.2
UPF3B-201ENST00000276201 SPRY2O43597 315 aa7.58□□□□□ -1.2
UPF3B-201ENST00000276201 TIMM17BO60830 172 aa7.58□□□□□ -1.2
UPF3B-201ENST00000276201 CD28P10747 220 aa7.58□□□□□ -1.2
UPF3B-201ENST00000276201 UBE2WQ96B02 151 aa7.58□□□□□ -1.2
UPF3B-201ENST00000276201 ZNF580Q9UK33 172 aa7.58□□□□□ -1.2
UPF3B-201ENST00000276201 I3L3M4 83 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms