RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 ESDP10768 282 aa11.77□□□□□ -0.52
SKP2-201ENST00000274254 FCER1GP30273 86 aa11.77□□□□□ -0.52
SKP2-201ENST00000274254 AMTP48728 403 aa11.77□□□□□ -0.52
SKP2-201ENST00000274254 UBE2DNLQ8IWF7 75 aa11.77□□□□□ -0.52
SKP2-201ENST00000274254 PRSS3P2Q8NHM4 247 aa11.77□□□□□ -0.52
SKP2-201ENST00000274254 CHCHD7Q9BUK0 85 aa11.77□□□□□ -0.52
SKP2-201ENST00000274254 TRAV8-6A0A0B4J262 113 aa11.76□□□□□ -0.53
SKP2-201ENST00000274254 Q0VG73 95 aa11.76□□□□□ -0.53
SKP2-201ENST00000274254 TMEM243Q9BU79 118 aa11.76□□□□□ -0.53
SKP2-201ENST00000274254 HIST1H2BKO60814 126 aa11.76□□□□□ -0.53
SKP2-201ENST00000274254 HIST1H2BJP06899 126 aa11.76□□□□□ -0.53
SKP2-201ENST00000274254 HIST1H2BOP23527 126 aa11.76□□□□□ -0.53
SKP2-201ENST00000274254 HIST1H2BBP33778 126 aa11.76□□□□□ -0.53
SKP2-201ENST00000274254 HIST1H2BDP58876 126 aa11.76□□□□□ -0.53
SKP2-201ENST00000274254 HIST1H2BCP62807 126 aa11.76□□□□□ -0.53
SKP2-201ENST00000274254 HIST2H2BEQ16778 126 aa11.76□□□□□ -0.53
SKP2-201ENST00000274254 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.76□□□□□ -0.53
SKP2-201ENST00000274254 WFDC10BQ8IUB3 73 aa11.76□□□□□ -0.53
SKP2-201ENST00000274254 LINC00476Q8WZB0 136 aa11.76□□□□□ -0.53
SKP2-201ENST00000274254 HIST1H2BHQ93079 126 aa11.76□□□□□ -0.53
SKP2-201ENST00000274254 URB1-AS1Q96HZ7 61 aa11.76□□□□□ -0.53
SKP2-201ENST00000274254 LYSTQ99698 3801 aa11.76□□□□□ -0.53
SKP2-201ENST00000274254 HIST1H2BNQ99877 126 aa11.76□□□□□ -0.53
SKP2-201ENST00000274254 HIST1H2BMQ99879 126 aa11.76□□□□□ -0.53
SKP2-201ENST00000274254 FA2HQ7L5A8 372 aa11.74□□□□□ -0.53
SKP2-201ENST00000274254 CHCHD5Q9BSY4 110 aa11.74□□□□□ -0.53
SKP2-201ENST00000274254 VPS13DQ5THJ4 4388 aa11.73□□□□□ -0.53
SKP2-201ENST00000274254 C1orf196B1AJZ1 125 aa11.73□□□□□ -0.53
SKP2-201ENST00000274254 LINC00614P0C842 121 aa11.73□□□□□ -0.53
SKP2-201ENST00000274254 LAGE3Q14657 143 aa11.73□□□□□ -0.53
SKP2-201ENST00000274254 ORMDL2Q53FV1 153 aa11.73□□□□□ -0.53
SKP2-201ENST00000274254 NIT1Q86X76 327 aa11.73□□□□□ -0.53
SKP2-201ENST00000274254 H7C423 109 aa11.72□□□□□ -0.53
SKP2-201ENST00000274254 SIVA1O15304 175 aa11.72□□□□□ -0.53
SKP2-201ENST00000274254 DNAH10OSP0CZ25 163 aa11.72□□□□□ -0.53
SKP2-201ENST00000274254 RAB5BP61020 215 aa11.72□□□□□ -0.53
SKP2-201ENST00000274254 C20orf203Q8NBC4 194 aa11.72□□□□□ -0.53
SKP2-201ENST00000274254 Q9H8V8 135 aa11.72□□□□□ -0.53
SKP2-201ENST00000274254 AP5S1Q9NUS5 200 aa11.72□□□□□ -0.53
SKP2-201ENST00000274254 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.71□□□□□ -0.53
SKP2-201ENST00000274254 IGKV2-29A2NJV5 120 aaPredicted RBP11.71□□□□□ -0.53
SKP2-201ENST00000274254 LINC01556Q5JQF7 62 aa11.71□□□□□ -0.53
SKP2-201ENST00000274254 BAGE3Q86Y29 109 aa11.71□□□□□ -0.53
SKP2-201ENST00000274254 UBE2L6O14933 153 aa11.7□□□□□ -0.54
SKP2-201ENST00000274254 LY6G6CO95867 125 aa11.7□□□□□ -0.54
SKP2-201ENST00000274254 GAGE6Q13070 117 aa11.7□□□□□ -0.54
SKP2-201ENST00000274254 TMEM262E9PQX1 116 aa11.7□□□□□ -0.54
SKP2-201ENST00000274254 LINC00310P59036 64 aa11.7□□□□□ -0.54
SKP2-201ENST00000274254 PKIAP61925 76 aa11.7□□□□□ -0.54
SKP2-201ENST00000274254 MPV17L2Q567V2 206 aa11.7□□□□□ -0.54
SKP2-201ENST00000274254 RNASEKQ6P5S7 137 aaKnown RBP11.7□□□□□ -0.54
SKP2-201ENST00000274254 Q8N3U1 123 aa11.7□□□□□ -0.54
SKP2-201ENST00000274254 CHCHD1Q96BP2 118 aaKnown RBP11.7□□□□□ -0.54
SKP2-201ENST00000274254 ALMS1Q8TCU4 4167 aa11.7□□□□□ -0.54
SKP2-201ENST00000274254 RPL39P62891 51 aaKnown RBP11.69□□□□□ -0.54
SKP2-201ENST00000274254 MRPL52Q86TS9 123 aaKnown RBP11.69□□□□□ -0.54
SKP2-201ENST00000274254 TMEM18Q96B42 140 aa11.69□□□□□ -0.54
SKP2-201ENST00000274254 DNAH1Q9P2D7 4330 aa11.69□□□□□ -0.54
SKP2-201ENST00000274254 A0A087WX48 190 aa11.68□□□□□ -0.54
SKP2-201ENST00000274254 A0A1B0GUV1 79 aa11.68□□□□□ -0.54
SKP2-201ENST00000274254 SERF1AO75920 110 aa11.68□□□□□ -0.54
SKP2-201ENST00000274254 FGF6P10767 208 aa11.68□□□□□ -0.54
SKP2-201ENST00000274254 G0S2P27469 103 aa11.67□□□□□ -0.54
SKP2-201ENST00000274254 RBX1P62877 108 aa11.67□□□□□ -0.54
SKP2-201ENST00000274254 C2orf66Q6UXQ4 117 aa11.67□□□□□ -0.54
SKP2-201ENST00000274254 Q8N976 141 aa11.67□□□□□ -0.54
SKP2-201ENST00000274254 TIMM21Q9BVV7 248 aa11.67□□□□□ -0.54
SKP2-201ENST00000274254 CYSLTR1Q9Y271 337 aa11.67□□□□□ -0.54
SKP2-201ENST00000274254 UBE2D4Q9Y2X8 147 aa11.67□□□□□ -0.54
SKP2-201ENST00000274254 A0A096LNJ9 63 aa11.66□□□□□ -0.54
SKP2-201ENST00000274254 IGHV3-30P01768 117 aa11.66□□□□□ -0.54
SKP2-201ENST00000274254 IGHV3-33P01772 117 aa11.66□□□□□ -0.54
SKP2-201ENST00000274254 IGHV3-30-3P0DP02 117 aa11.66□□□□□ -0.54
SKP2-201ENST00000274254 IGHV3-30-5P0DP03 117 aa11.66□□□□□ -0.54
SKP2-201ENST00000274254 ZNF25P17030 456 aaPredicted RBP11.66□□□□□ -0.54
SKP2-201ENST00000274254 BTF3P20290 206 aaKnown RBP11.66□□□□□ -0.54
SKP2-201ENST00000274254 COA6Q5JTJ3 125 aaKnown RBP11.66□□□□□ -0.54
SKP2-201ENST00000274254 TOMM6Q96B49 74 aa11.66□□□□□ -0.54
SKP2-201ENST00000274254 CSDC2Q9Y534 153 aaKnown RBP11.66□□□□□ -0.54
SKP2-201ENST00000274254 IGLV4-60A0A075B6I1 120 aa11.65□□□□□ -0.54
SKP2-201ENST00000274254 LCE6AA0A183 80 aa11.65□□□□□ -0.54
SKP2-201ENST00000274254 K7EP13 123 aa11.65□□□□□ -0.54
SKP2-201ENST00000274254 AMMECR1LQ6DCA0 310 aa11.65□□□□□ -0.54
SKP2-201ENST00000274254 NUPR1O60356 82 aa11.65□□□□□ -0.55
SKP2-201ENST00000274254 SMAGPQ0VAQ4 97 aa11.65□□□□□ -0.55
SKP2-201ENST00000274254 PMCHL1Q16048 86 aa11.65□□□□□ -0.55
SKP2-201ENST00000274254 SPANXA1Q9NS26 97 aa11.65□□□□□ -0.55
SKP2-201ENST00000274254 LINC01549A6NIU2 74 aa11.64□□□□□ -0.55
SKP2-201ENST00000274254 HSBP1O75506 76 aa11.64□□□□□ -0.55
SKP2-201ENST00000274254 PYGO1Q9Y3Y4 419 aa11.64□□□□□ -0.55
SKP2-201ENST00000274254 NBDYA0A0U1RRE5 68 aa11.63□□□□□ -0.55
SKP2-201ENST00000274254 IGIPA6NJ69 53 aa11.63□□□□□ -0.55
SKP2-201ENST00000274254 HBDP02042 147 aa11.63□□□□□ -0.55
SKP2-201ENST00000274254 C10orf126Q8N4M7 172 aa11.63□□□□□ -0.55
SKP2-201ENST00000274254 OR5A1Q8NGJ0 315 aa11.63□□□□□ -0.55
SKP2-201ENST00000274254 FAM104AQ969W3 186 aa11.63□□□□□ -0.55
SKP2-201ENST00000274254 KRTAP1-5Q9BYS1 174 aa11.63□□□□□ -0.55
SKP2-201ENST00000274254 TRAV9-2A0A087WT02 112 aa11.62□□□□□ -0.55
SKP2-201ENST00000274254 NDUFA6P56556 154 aa11.62□□□□□ -0.55
SKP2-201ENST00000274254 TMEM101Q96IK0 257 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms