RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 A0A096LNI7 61 aa8.65□□□□□ -1.02
USP53-201ENST00000274030 WFDC9Q8NEX5 89 aa8.65□□□□□ -1.02
USP53-201ENST00000274030 HIGD1BQ9P298 99 aa8.65□□□□□ -1.02
USP53-201ENST00000274030 INAFM1C9JVW0 142 aa8.65□□□□□ -1.02
USP53-201ENST00000274030 C20orf173Q96LM9 149 aa8.65□□□□□ -1.02
USP53-201ENST00000274030 PSMB8P28062 276 aa8.65□□□□□ -1.02
USP53-201ENST00000274030 C11orf45Q8TAV5 145 aa8.65□□□□□ -1.02
USP53-201ENST00000274030 FAM110AQ9BQ89 295 aa8.65□□□□□ -1.02
USP53-201ENST00000274030 SPANXDQ9BXN6 97 aa8.65□□□□□ -1.03
USP53-201ENST00000274030 C14orf132Q9NPU4 83 aa8.65□□□□□ -1.03
USP53-201ENST00000274030 TP73-AS1Q9UF72 201 aa8.65□□□□□ -1.03
USP53-201ENST00000274030 LINC00482Q8N8I6 264 aa8.64□□□□□ -1.03
USP53-201ENST00000274030 IGHV4-31P0DP07 118 aa8.64□□□□□ -1.03
USP53-201ENST00000274030 CHKB-CPT1BH3BT56 60 aa8.64□□□□□ -1.03
USP53-201ENST00000274030 ZNF295-AS1Q8N0V1 137 aa8.64□□□□□ -1.03
USP53-201ENST00000274030 TMEM258P61165 79 aa8.64□□□□□ -1.03
USP53-201ENST00000274030 SPATA25Q9BR10 227 aa8.64□□□□□ -1.03
USP53-201ENST00000274030 CRIP3Q6Q6R5 217 aa8.63□□□□□ -1.03
USP53-201ENST00000274030 CXCL5P42830 114 aa8.63□□□□□ -1.03
USP53-201ENST00000274030 FOXI1Q12951 378 aa8.63□□□□□ -1.03
USP53-201ENST00000274030 HIGD2AQ9BW72 106 aa8.63□□□□□ -1.03
USP53-201ENST00000274030 KLK5Q9Y337 293 aaPredicted RBP8.63□□□□□ -1.03
USP53-201ENST00000274030 INSL3P51460 131 aa8.63□□□□□ -1.03
USP53-201ENST00000274030 LINC00467Q9BRT7 94 aa8.63□□□□□ -1.03
USP53-201ENST00000274030 TRBV10-1A0A0K0K1A3 114 aa8.62□□□□□ -1.03
USP53-201ENST00000274030 TRBV10-2A0A0K0K1G8 114 aa8.62□□□□□ -1.03
USP53-201ENST00000274030 A0A1B0GXF2 115 aa8.62□□□□□ -1.03
USP53-201ENST00000274030 C4orf48Q5BLP8 95 aa8.62□□□□□ -1.03
USP53-201ENST00000274030 PKIGQ9Y2B9 76 aa8.62□□□□□ -1.03
USP53-201ENST00000274030 REG3AQ06141 175 aa8.62□□□□□ -1.03
USP53-201ENST00000274030 DEFB114Q30KQ6 69 aa8.62□□□□□ -1.03
USP53-201ENST00000274030 Q6YL49 198 aa8.62□□□□□ -1.03
USP53-201ENST00000274030 PRORYQ9H606 182 aa8.62□□□□□ -1.03
USP53-201ENST00000274030 H0Y9J4 135 aa8.62□□□□□ -1.03
USP53-201ENST00000274030 K7EQG2 157 aa8.62□□□□□ -1.03
USP53-201ENST00000274030 MP68P56378 58 aa8.62□□□□□ -1.03
USP53-201ENST00000274030 NDUFA11Q86Y39 141 aa8.61□□□□□ -1.03
USP53-201ENST00000274030 ZFAND2AQ8N6M9 145 aa8.61□□□□□ -1.03
USP53-201ENST00000274030 PROK1P58294 105 aa8.61□□□□□ -1.03
USP53-201ENST00000274030 CDKN2A-AS1Q9UH64 79 aa8.61□□□□□ -1.03
USP53-201ENST00000274030 ZNF106Q9H2Y7 1883 aaKnown RBP8.61□□□□□ -1.03
USP53-201ENST00000274030 SPATA12Q7Z6I5 190 aa8.61□□□□□ -1.03
USP53-201ENST00000274030 LINC00574Q9H8X3 128 aa8.61□□□□□ -1.03
USP53-201ENST00000274030 JMJD1CQ15652 2540 aa8.61□□□□□ -1.03
USP53-201ENST00000274030 A0A0J9YXY3 114 aa8.61□□□□□ -1.03
USP53-201ENST00000274030 JMJD7-PLA2G4BH0Y9G9 81 aa8.61□□□□□ -1.03
USP53-201ENST00000274030 LRCOL1A6NCL2 159 aa8.6□□□□□ -1.03
USP53-201ENST00000274030 KIAA1549Q9HCM3 1950 aa8.6□□□□□ -1.03
USP53-201ENST00000274030 CRYGBP07316 175 aa8.6□□□□□ -1.03
USP53-201ENST00000274030 IGLC6P0CF74 106 aa8.6□□□□□ -1.03
USP53-201ENST00000274030 COX7BP24311 80 aa8.6□□□□□ -1.03
USP53-201ENST00000274030 TCL1BO95988 128 aa8.6□□□□□ -1.03
USP53-201ENST00000274030 MIAQ16674 131 aa8.59□□□□□ -1.03
USP53-201ENST00000274030 SMIM20Q8N5G0 67 aa8.59□□□□□ -1.03
USP53-201ENST00000274030 MLST8Q9BVC4 326 aa8.59□□□□□ -1.03
USP53-201ENST00000274030 Q8N976 141 aa8.59□□□□□ -1.03
USP53-201ENST00000274030 CHCHD10Q8WYQ3 142 aaPredicted RBP8.59□□□□□ -1.03
USP53-201ENST00000274030 Q6ZSV7 163 aa8.59□□□□□ -1.03
USP53-201ENST00000274030 RNF183Q96D59 192 aa8.59□□□□□ -1.03
USP53-201ENST00000274030 TMEM256-PLSCR3K7ERE1 68 aa8.59□□□□□ -1.03
USP53-201ENST00000274030 CRIP1P50238 77 aa8.59□□□□□ -1.03
USP53-201ENST00000274030 ATOX1O00244 68 aa8.58□□□□□ -1.04
USP53-201ENST00000274030 PRRC2AP48634 2157 aaKnown RBP8.58□□□□□ -1.04
USP53-201ENST00000274030 DEFB131BA0A096LNP1 70 aa8.58□□□□□ -1.04
USP53-201ENST00000274030 XAGE1AQ9HD64 81 aa8.58□□□□□ -1.04
USP53-201ENST00000274030 SLPIP03973 132 aa8.58□□□□□ -1.04
USP53-201ENST00000274030 ARHGAP32A7KAX9 2087 aa8.58□□□□□ -1.04
USP53-201ENST00000274030 PRM2P04554 102 aa8.58□□□□□ -1.04
USP53-201ENST00000274030 PIK3CD-AS1Q5SR53 167 aa8.57□□□□□ -1.04
USP53-201ENST00000274030 NEXN-AS1Q8NBZ9 246 aa8.57□□□□□ -1.04
USP53-201ENST00000274030 H3BT86 120 aa8.57□□□□□ -1.04
USP53-201ENST00000274030 CRYGDP07320 174 aa8.57□□□□□ -1.04
USP53-201ENST00000274030 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.57□□□□□ -1.04
USP53-201ENST00000274030 ZFAND3Q9H8U3 227 aa8.57□□□□□ -1.04
USP53-201ENST00000274030 EIF4EBP1Q13541 118 aaPredicted RBP8.56□□□□□ -1.04
USP53-201ENST00000274030 WFDC10AQ9H1F0 79 aa8.56□□□□□ -1.04
USP53-201ENST00000274030 TRAV23DV6A0A075B6W5 121 aa8.56□□□□□ -1.04
USP53-201ENST00000274030 SPANXCQ9NY87 97 aa8.56□□□□□ -1.04
USP53-201ENST00000274030 TMEM131Q92545 1883 aa8.55□□□□□ -1.04
USP53-201ENST00000274030 IGLV4-3A0A075B6K6 122 aa8.55□□□□□ -1.04
USP53-201ENST00000274030 A8MZ25 164 aa8.55□□□□□ -1.04
USP53-201ENST00000274030 LY6LH3BQJ8 138 aa8.55□□□□□ -1.04
USP53-201ENST00000274030 LINC00526Q96FQ7 95 aa8.55□□□□□ -1.04
USP53-201ENST00000274030 UFSP1Q6NVU6 142 aa8.55□□□□□ -1.04
USP53-201ENST00000274030 C18orf65Q6ZTR6 163 aa8.55□□□□□ -1.04
USP53-201ENST00000274030 SCXQ7RTU7 201 aa8.55□□□□□ -1.04
USP53-201ENST00000274030 CFAP126Q5VTH2 177 aa8.55□□□□□ -1.04
USP53-201ENST00000274030 TLN1Q9Y490 2541 aaKnown RBP8.55□□□□□ -1.04
USP53-201ENST00000274030 A0A087WZ39 114 aa8.55□□□□□ -1.04
USP53-201ENST00000274030 MBD6Q96DN6 1003 aa8.55□□□□□ -1.04
USP53-201ENST00000274030 ZNF22P17026 224 aaPredicted RBP8.55□□□□□ -1.04
USP53-201ENST00000274030 Q6ZS46 218 aa8.55□□□□□ -1.04
USP53-201ENST00000274030 LRRC75A-AS1Q8N1F1 130 aa8.55□□□□□ -1.04
USP53-201ENST00000274030 B9D2Q9BPU9 175 aa8.55□□□□□ -1.04
USP53-201ENST00000274030 TEX49A0A1B0GTD5 131 aa8.54□□□□□ -1.04
USP53-201ENST00000274030 DCANP1Q8TF63 244 aa8.54□□□□□ -1.04
USP53-201ENST00000274030 MAPKAPK5-AS1Q8N8E1 139 aa8.54□□□□□ -1.04
USP53-201ENST00000274030 TLN2Q9Y4G6 2542 aa8.54□□□□□ -1.04
USP53-201ENST00000274030 FAM19A1Q7Z5A9 133 aa8.54□□□□□ -1.04
USP53-201ENST00000274030 ZFYVE26Q68DK2 2539 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms