RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 KLK9Q2XQG4 91 aa12.69□□□□□ -0.38
LRRC56-201ENST00000270115 KLK9Q9UKQ9 250 aa12.69□□□□□ -0.38
LRRC56-201ENST00000270115 IGHV3-73A0A0B4J1V6 119 aa12.69□□□□□ -0.38
LRRC56-201ENST00000270115 A0A0U1RRA0 63 aa12.69□□□□□ -0.38
LRRC56-201ENST00000270115 RHPN1-AS1Q9BWJ2 59 aa12.69□□□□□ -0.38
LRRC56-201ENST00000270115 CCL21O00585 134 aa12.68□□□□□ -0.38
LRRC56-201ENST00000270115 NPFFO15130 113 aa12.68□□□□□ -0.38
LRRC56-201ENST00000270115 DNAJC30Q96LL9 226 aa12.68□□□□□ -0.38
LRRC56-201ENST00000270115 IGHV3-16A0A0C4DH30 117 aa12.67□□□□□ -0.38
LRRC56-201ENST00000270115 FAM104AQ969W3 186 aa12.67□□□□□ -0.38
LRRC56-201ENST00000270115 SIRPDQ9H106 197 aa12.67□□□□□ -0.38
LRRC56-201ENST00000270115 SORL1Q92673 2214 aa12.67□□□□□ -0.38
LRRC56-201ENST00000270115 C5orf56Q8N8D9 126 aa12.66□□□□□ -0.38
LRRC56-201ENST00000270115 IGHV3OR16-10A0A075B7F0 116 aa12.66□□□□□ -0.38
LRRC56-201ENST00000270115 NDUFA4O00483 81 aa12.66□□□□□ -0.38
LRRC56-201ENST00000270115 VSIG2Q96IQ7 327 aa12.66□□□□□ -0.38
LRRC56-201ENST00000270115 MRPS36P82909 103 aaKnown RBP12.65□□□□□ -0.38
LRRC56-201ENST00000270115 CITED2Q99967 270 aaPredicted RBP12.65□□□□□ -0.38
LRRC56-201ENST00000270115 IMUPQ9GZP8 106 aa12.65□□□□□ -0.38
LRRC56-201ENST00000270115 UQCRQO14949 82 aa12.65□□□□□ -0.38
LRRC56-201ENST00000270115 DCANP1Q8TF63 244 aa12.65□□□□□ -0.38
LRRC56-201ENST00000270115 UCNP55089 124 aa12.64□□□□□ -0.39
LRRC56-201ENST00000270115 ZNF625Q96I27 306 aaPredicted RBP12.64□□□□□ -0.39
LRRC56-201ENST00000270115 C9orf85Q96MD7 179 aa12.64□□□□□ -0.39
LRRC56-201ENST00000270115 ACACBO00763 2458 aa12.64□□□□□ -0.39
LRRC56-201ENST00000270115 FAM223BA6NKX1 122 aa12.64□□□□□ -0.39
LRRC56-201ENST00000270115 ACYP1P07311 99 aa12.64□□□□□ -0.39
LRRC56-201ENST00000270115 PROK1P58294 105 aa12.64□□□□□ -0.39
LRRC56-201ENST00000270115 DAZ2Q13117 558 aaKnown RBP12.64□□□□□ -0.39
LRRC56-201ENST00000270115 DAZ4Q86SG3 579 aaKnown RBP12.64□□□□□ -0.39
LRRC56-201ENST00000270115 LINC00643Q86TS7 51 aa12.64□□□□□ -0.39
LRRC56-201ENST00000270115 FAM223AQ8IWN6 122 aa12.64□□□□□ -0.39
LRRC56-201ENST00000270115 DAZ1Q9NQZ3 744 aaKnown RBP12.64□□□□□ -0.39
LRRC56-201ENST00000270115 DAZ3Q9NR90 486 aaKnown RBP12.64□□□□□ -0.39
LRRC56-201ENST00000270115 KLRB1Q12918 225 aa12.63□□□□□ -0.39
LRRC56-201ENST00000270115 LINC00526Q96FQ7 95 aa12.63□□□□□ -0.39
LRRC56-201ENST00000270115 EDA2RQ9HAV5 297 aa12.63□□□□□ -0.39
LRRC56-201ENST00000270115 HTN1P15515 57 aa12.62□□□□□ -0.39
LRRC56-201ENST00000270115 FAM19A5Q7Z5A7 132 aaPredicted RBP12.62□□□□□ -0.39
LRRC56-201ENST00000270115 HIVEP3Q5T1R4 2406 aa12.62□□□□□ -0.39
LRRC56-201ENST00000270115 ADORA2A-AS1P86434 159 aa12.62□□□□□ -0.39
LRRC56-201ENST00000270115 Q9UF83 564 aa12.61□□□□□ -0.39
LRRC56-201ENST00000270115 MAP1AP78559 2803 aaPredicted RBP12.61□□□□□ -0.39
LRRC56-201ENST00000270115 RS1O15537 224 aa12.61□□□□□ -0.39
LRRC56-201ENST00000270115 CACNA1AO00555 2505 aa12.61□□□□□ -0.39
LRRC56-201ENST00000270115 ZFYVE26Q68DK2 2539 aa12.61□□□□□ -0.39
LRRC56-201ENST00000270115 Q8N2B8 174 aa12.6□□□□□ -0.39
LRRC56-201ENST00000270115 UBTD1Q9HAC8 227 aa12.6□□□□□ -0.39
LRRC56-201ENST00000270115 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.6□□□□□ -0.39
LRRC56-201ENST00000270115 IGKV2-29A2NJV5 120 aaPredicted RBP12.6□□□□□ -0.39
LRRC56-201ENST00000270115 SPINK13Q1W4C9 94 aa12.6□□□□□ -0.39
LRRC56-201ENST00000270115 NACAE9PAV3 2078 aa12.6□□□□□ -0.39
LRRC56-201ENST00000270115 BAALC-AS2P0C853 105 aa12.59□□□□□ -0.39
LRRC56-201ENST00000270115 GAGE2AQ6NT46 116 aa12.59□□□□□ -0.39
LRRC56-201ENST00000270115 CFAP46Q8IYW2 2715 aa12.58□□□□□ -0.4
LRRC56-201ENST00000270115 J3KT08 172 aa12.58□□□□□ -0.4
LRRC56-201ENST00000270115 COX7A2LO14548 114 aa12.58□□□□□ -0.4
LRRC56-201ENST00000270115 C5orf47Q569G3 176 aa12.58□□□□□ -0.4
LRRC56-201ENST00000270115 CDKN2A-AS1Q9UH64 79 aa12.58□□□□□ -0.4
LRRC56-201ENST00000270115 PYGO1Q9Y3Y4 419 aa12.58□□□□□ -0.4
LRRC56-201ENST00000270115 hADV29S1A0JD25 119 aa12.58□□□□□ -0.4
LRRC56-201ENST00000270115 SMIM9A6NGZ8 99 aa12.58□□□□□ -0.4
LRRC56-201ENST00000270115 KNCNA6PVL3 124 aa12.58□□□□□ -0.4
LRRC56-201ENST00000270115 IGHG2P01859 326 aa12.58□□□□□ -0.4
LRRC56-201ENST00000270115 IGHV1OR15-1A0A075B7D0 117 aa12.57□□□□□ -0.4
LRRC56-201ENST00000270115 TINCRA0A1B0GVN0 87 aa12.57□□□□□ -0.4
LRRC56-201ENST00000270115 COX7CP15954 63 aa12.57□□□□□ -0.4
LRRC56-201ENST00000270115 TIRAPP58753 221 aa12.57□□□□□ -0.4
LRRC56-201ENST00000270115 VPS13CQ709C8 3753 aa12.57□□□□□ -0.4
LRRC56-201ENST00000270115 LY6EQ16553 131 aa12.57□□□□□ -0.4
LRRC56-201ENST00000270115 C19orf54Q5BKX5 351 aa12.57□□□□□ -0.4
LRRC56-201ENST00000270115 LINC00308Q8TCZ7 52 aa12.57□□□□□ -0.4
LRRC56-201ENST00000270115 CYSTM1Q9H1C7 97 aa12.56□□□□□ -0.4
LRRC56-201ENST00000270115 MOB4Q9Y3A3 225 aa12.56□□□□□ -0.4
LRRC56-201ENST00000270115 IGHV3-38A0A0C4DH36 116 aa12.55□□□□□ -0.4
LRRC56-201ENST00000270115 TRAV13-1A0A0B4J241 112 aa12.55□□□□□ -0.4
LRRC56-201ENST00000270115 Q9H8V8 135 aa12.55□□□□□ -0.4
LRRC56-201ENST00000270115 Q9HAA7 133 aa12.55□□□□□ -0.4
LRRC56-201ENST00000270115 DOPEY2Q9Y3R5 2298 aa12.55□□□□□ -0.4
LRRC56-201ENST00000270115 PRM2P04554 102 aa12.54□□□□□ -0.4
LRRC56-201ENST00000270115 CIRBPQ14011 172 aaKnown RBP12.54□□□□□ -0.4
LRRC56-201ENST00000270115 BRD3OSQ6XYD6 125 aa12.54□□□□□ -0.4
LRRC56-201ENST00000270115 C5orf38Q86SI9 138 aa12.54□□□□□ -0.4
LRRC56-201ENST00000270115 LRRC75A-AS1Q8N1F1 130 aa12.54□□□□□ -0.4
LRRC56-201ENST00000270115 C2orf48Q96LS8 159 aa12.54□□□□□ -0.4
LRRC56-201ENST00000270115 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.54□□□□□ -0.4
LRRC56-201ENST00000270115 FAM218AQ96MZ4 157 aa12.54□□□□□ -0.4
LRRC56-201ENST00000270115 FBXL19-AS1Q494R0 122 aa12.53□□□□□ -0.4
LRRC56-201ENST00000270115 SDIM1Q6ZPB5 146 aa12.53□□□□□ -0.4
LRRC56-201ENST00000270115 TRAV25A0A0B4J276 109 aa12.53□□□□□ -0.4
LRRC56-201ENST00000270115 C11orf71Q6IPW1 123 aa12.53□□□□□ -0.4
LRRC56-201ENST00000270115 PEMTQ9UBM1 199 aa12.53□□□□□ -0.4
LRRC56-201ENST00000270115 UBE2D4Q9Y2X8 147 aa12.53□□□□□ -0.4
LRRC56-201ENST00000270115 C22orf24Q9Y442 160 aa12.53□□□□□ -0.4
LRRC56-201ENST00000270115 HOXD3P31249 432 aaPredicted RBP12.52□□□□□ -0.4
LRRC56-201ENST00000270115 SOSTDC1Q6X4U4 206 aa12.52□□□□□ -0.4
LRRC56-201ENST00000270115 IGSF10Q6WRI0 2623 aa12.52□□□□□ -0.4
LRRC56-201ENST00000270115 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.52□□□□□ -0.4
LRRC56-201ENST00000270115 A0A1W2PPR1 153 aa12.52□□□□□ -0.41
LRRC56-201ENST00000270115 TIMM17BO60830 172 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms