RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 TRBV24-1A0A075B6N3 115 aa8.59□□□□□ -1.03
SS18-202ENST00000269138 A0A087WX48 190 aa8.59□□□□□ -1.03
SS18-202ENST00000269138 TGIF2-C20orf24A0A0A6YYL0 155 aa8.59□□□□□ -1.03
SS18-202ENST00000269138 TRBV27A0A0K0K1C4 114 aa8.59□□□□□ -1.03
SS18-202ENST00000269138 IBA57-AS1B1ANH7 110 aa8.59□□□□□ -1.03
SS18-202ENST00000269138 K7EP13 123 aa8.59□□□□□ -1.03
SS18-202ENST00000269138 PPP1R17O96001 155 aa8.59□□□□□ -1.03
SS18-202ENST00000269138 MPV17L2Q567V2 206 aa8.59□□□□□ -1.03
SS18-202ENST00000269138 ORMDL3Q8N138 153 aa8.59□□□□□ -1.03
SS18-202ENST00000269138 C10orf126Q8N4M7 172 aa8.59□□□□□ -1.03
SS18-202ENST00000269138 PRELID3AQ96N28 172 aa8.59□□□□□ -1.03
SS18-202ENST00000269138 VCYO14598 125 aa8.58□□□□□ -1.04
SS18-202ENST00000269138 PPBPP02775 128 aa8.58□□□□□ -1.04
SS18-202ENST00000269138 Q6ZRN7 208 aaPredicted RBP8.58□□□□□ -1.04
SS18-202ENST00000269138 Q8N976 141 aa8.58□□□□□ -1.04
SS18-202ENST00000269138 KLK12Q9UKR0 248 aa8.58□□□□□ -1.04
SS18-202ENST00000269138 FRAS1Q86XX4 4008 aa8.57□□□□□ -1.04
SS18-202ENST00000269138 RBX1P62877 108 aa8.57□□□□□ -1.04
SS18-202ENST00000269138 ELOBQ15370 118 aa8.57□□□□□ -1.04
SS18-202ENST00000269138 KIAA1644Q3SXP7 199 aa8.57□□□□□ -1.04
SS18-202ENST00000269138 C20orf78Q9BR46 151 aa8.57□□□□□ -1.04
SS18-202ENST00000269138 CHCHD7Q9BUK0 85 aa8.57□□□□□ -1.04
SS18-202ENST00000269138 Q9HAA7 133 aa8.57□□□□□ -1.04
SS18-202ENST00000269138 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.56□□□□□ -1.04
SS18-202ENST00000269138 IGKV2-29A2NJV5 120 aaPredicted RBP8.56□□□□□ -1.04
SS18-202ENST00000269138 PRSS29PA6NIE9 313 aa8.56□□□□□ -1.04
SS18-202ENST00000269138 APCSP02743 223 aa8.56□□□□□ -1.04
SS18-202ENST00000269138 TNP2Q05952 138 aa8.56□□□□□ -1.04
SS18-202ENST00000269138 GNB1LQ9BYB4 327 aa8.56□□□□□ -1.04
SS18-202ENST00000269138 DNAH17Q9UFH2 4485 aa8.56□□□□□ -1.04
SS18-202ENST00000269138 PHOX2AO14813 284 aa8.55□□□□□ -1.04
SS18-202ENST00000269138 ESDP10768 282 aa8.55□□□□□ -1.04
SS18-202ENST00000269138 BTF3P20290 206 aaKnown RBP8.55□□□□□ -1.04
SS18-202ENST00000269138 RPL32P62910 135 aaKnown RBP8.55□□□□□ -1.04
SS18-202ENST00000269138 LINC00336Q6ZUF6 198 aa8.55□□□□□ -1.04
SS18-202ENST00000269138 YPEL4Q96NS1 127 aa8.55□□□□□ -1.04
SS18-202ENST00000269138 SMIM2Q9BVW6 85 aa8.55□□□□□ -1.04
SS18-202ENST00000269138 IGLV4-60A0A075B6I1 120 aa8.54□□□□□ -1.04
SS18-202ENST00000269138 LOC389332A0A1B0GUA5 103 aa8.54□□□□□ -1.04
SS18-202ENST00000269138 UBE2L6O14933 153 aa8.54□□□□□ -1.04
SS18-202ENST00000269138 HLA-DQA1P01909 254 aa8.54□□□□□ -1.04
SS18-202ENST00000269138 ANGP03950 147 aaKnown RBP8.54□□□□□ -1.04
SS18-202ENST00000269138 PKIAP61925 76 aa8.54□□□□□ -1.04
SS18-202ENST00000269138 CBLN2Q8IUK8 224 aa8.54□□□□□ -1.04
SS18-202ENST00000269138 FCER1GP30273 86 aa8.54□□□□□ -1.04
SS18-202ENST00000269138 LAGE3Q14657 143 aa8.54□□□□□ -1.04
SS18-202ENST00000269138 ENHOQ6UWT2 76 aa8.54□□□□□ -1.04
SS18-202ENST00000269138 NFE4Q86UQ8 179 aa8.54□□□□□ -1.04
SS18-202ENST00000269138 C20orf203Q8NBC4 194 aa8.54□□□□□ -1.04
SS18-202ENST00000269138 UBE2WQ96B02 151 aa8.54□□□□□ -1.04
SS18-202ENST00000269138 KIR2DL4Q99706 377 aa8.54□□□□□ -1.04
SS18-202ENST00000269138 TCAPO15273 167 aa8.53□□□□□ -1.04
SS18-202ENST00000269138 COX19Q49B96 90 aa8.53□□□□□ -1.04
SS18-202ENST00000269138 CLPSL2Q6UWE3 100 aa8.53□□□□□ -1.04
SS18-202ENST00000269138 LINC00269Q8N2A0 174 aa8.53□□□□□ -1.04
SS18-202ENST00000269138 MRPL18Q9H0U6 180 aaKnown RBP8.53□□□□□ -1.04
SS18-202ENST00000269138 LAMTOR2Q9Y2Q5 125 aa8.53□□□□□ -1.04
SS18-202ENST00000269138 FAT2Q9NYQ8 4349 aa8.52□□□□□ -1.05
SS18-202ENST00000269138 TRAV8-3A0A0A6YYJ7 113 aa8.52□□□□□ -1.05
SS18-202ENST00000269138 A0A1B0GUV1 79 aa8.52□□□□□ -1.05
SS18-202ENST00000269138 PRSS47A8MTI9 375 aa8.52□□□□□ -1.05
SS18-202ENST00000269138 FGF6P10767 208 aa8.52□□□□□ -1.05
SS18-202ENST00000269138 FABP9Q0Z7S8 132 aa8.52□□□□□ -1.05
SS18-202ENST00000269138 MAP1LC3AQ9H492 121 aa8.52□□□□□ -1.05
SS18-202ENST00000269138 SMCO4Q9NRQ5 59 aa8.52□□□□□ -1.05
SS18-202ENST00000269138 A0A1B0GVY2 172 aa8.51□□□□□ -1.05
SS18-202ENST00000269138 H7C423 109 aa8.51□□□□□ -1.05
SS18-202ENST00000269138 MT-ND6P03923 174 aa8.51□□□□□ -1.05
SS18-202ENST00000269138 AMMECR1LQ6DCA0 310 aa8.51□□□□□ -1.05
SS18-202ENST00000269138 RNASEKQ6P5S7 137 aaKnown RBP8.51□□□□□ -1.05
SS18-202ENST00000269138 ALKBH7Q9BT30 221 aaPredicted RBP8.5□□□□□ -1.05
SS18-202ENST00000269138 PRR34Q9NV39 138 aa8.5□□□□□ -1.05
SS18-202ENST00000269138 TRAPPC1Q9Y5R8 145 aa8.5□□□□□ -1.05
SS18-202ENST00000269138 IGKV2D-24A0A075B6R9 120 aa8.49□□□□□ -1.05
SS18-202ENST00000269138 MAPKAPK5-AS1Q8N8E1 139 aa8.49□□□□□ -1.05
SS18-202ENST00000269138 Q8N8P6 123 aa8.49□□□□□ -1.05
SS18-202ENST00000269138 PSCAO43653 123 aa8.49□□□□□ -1.05
SS18-202ENST00000269138 CRPP02741 224 aa8.49□□□□□ -1.05
SS18-202ENST00000269138 IFI27P40305 119 aaPredicted RBP8.49□□□□□ -1.05
SS18-202ENST00000269138 RPL39P62891 51 aaKnown RBP8.49□□□□□ -1.05
SS18-202ENST00000269138 REG3AQ06141 175 aa8.49□□□□□ -1.05
SS18-202ENST00000269138 Q0VG73 95 aa8.49□□□□□ -1.05
SS18-202ENST00000269138 SCO1O75880 301 aa8.48□□□□□ -1.05
SS18-202ENST00000269138 RAB5AP20339 215 aa8.48□□□□□ -1.05
SS18-202ENST00000269138 MRPL52Q86TS9 123 aaKnown RBP8.48□□□□□ -1.05
SS18-202ENST00000269138 TM2D2Q9BX73 214 aa8.48□□□□□ -1.05
SS18-202ENST00000269138 IGLV10-54A0A075B6I4 117 aa8.47□□□□□ -1.05
SS18-202ENST00000269138 A0A087WTM6 91 aa8.47□□□□□ -1.05
SS18-202ENST00000269138 IGKV3OR2-268A0A0C4DH90 116 aa8.47□□□□□ -1.05
SS18-202ENST00000269138 LRCOL1A6NCL2 159 aa8.47□□□□□ -1.05
SS18-202ENST00000269138 ZNF25P17030 456 aaPredicted RBP8.47□□□□□ -1.05
SS18-202ENST00000269138 MIAQ16674 131 aa8.47□□□□□ -1.05
SS18-202ENST00000269138 OR5A1Q8NGJ0 315 aa8.47□□□□□ -1.05
SS18-202ENST00000269138 RMI2Q96E14 147 aa8.47□□□□□ -1.05
SS18-202ENST00000269138 TMEM101Q96IK0 257 aa8.47□□□□□ -1.05
SS18-202ENST00000269138 UBE2D4Q9Y2X8 147 aa8.47□□□□□ -1.05
SS18-202ENST00000269138 WFDC2Q14508 124 aa8.46□□□□□ -1.05
SS18-202ENST00000269138 KRTAP26-1Q6PEX3 210 aa8.46□□□□□ -1.05
SS18-202ENST00000269138 C1orf43Q9BWL3 253 aa8.46□□□□□ -1.05
SS18-202ENST00000269138 NXT2Q9NPJ8 142 aaKnown RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 270.7 ms