RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 ZC2HC1BQ5TFG8 222 aa11.25□□□□□ -0.61
VPS26A-201ENST00000263559 M0R143 59 aa11.25□□□□□ -0.61
VPS26A-201ENST00000263559 OPRPNQ99935 248 aaPredicted RBP11.25□□□□□ -0.61
VPS26A-201ENST00000263559 NBEAL2Q6ZNJ1 2754 aa11.25□□□□□ -0.61
VPS26A-201ENST00000263559 TRBV7-3A0A075B6L6 115 aa11.24□□□□□ -0.61
VPS26A-201ENST00000263559 SMIM9A6NGZ8 99 aa11.24□□□□□ -0.61
VPS26A-201ENST00000263559 IGHV4-30-4P0DP06 118 aa11.24□□□□□ -0.61
VPS26A-201ENST00000263559 PLNP26678 52 aa11.24□□□□□ -0.61
VPS26A-201ENST00000263559 TRBV10-1A0A0K0K1A3 114 aa11.23□□□□□ -0.61
VPS26A-201ENST00000263559 CHCHD7Q9BUK0 85 aa11.23□□□□□ -0.61
VPS26A-201ENST00000263559 MRPS16Q9Y3D3 137 aaKnown RBP11.23□□□□□ -0.61
VPS26A-201ENST00000263559 KRTAP10-11P60412 298 aa11.23□□□□□ -0.61
VPS26A-201ENST00000263559 PMVKQ15126 192 aa11.23□□□□□ -0.61
VPS26A-201ENST00000263559 DEFB130BP0DP73 79 aa11.22□□□□□ -0.61
VPS26A-201ENST00000263559 DEFB130AP0DP74 79 aa11.22□□□□□ -0.61
VPS26A-201ENST00000263559 NMUP48645 174 aa11.22□□□□□ -0.61
VPS26A-201ENST00000263559 RPL36AP83881 106 aaKnown RBP11.22□□□□□ -0.61
VPS26A-201ENST00000263559 RPL36ALQ969Q0 106 aaKnown RBP11.22□□□□□ -0.61
VPS26A-201ENST00000263559 CST9LQ9H4G1 147 aa11.22□□□□□ -0.61
VPS26A-201ENST00000263559 IGKV2D-26A0A0A0MRZ7 120 aa11.22□□□□□ -0.61
VPS26A-201ENST00000263559 CIDEAO60543 219 aa11.22□□□□□ -0.61
VPS26A-201ENST00000263559 FGF6P10767 208 aa11.22□□□□□ -0.61
VPS26A-201ENST00000263559 COTL1Q14019 142 aa11.22□□□□□ -0.61
VPS26A-201ENST00000263559 ZMAT5Q9UDW3 170 aaKnown RBP11.22□□□□□ -0.61
VPS26A-201ENST00000263559 CMYA5Q8N3K9 4069 aa11.21□□□□□ -0.61
VPS26A-201ENST00000263559 TRGV4A0A0C4DH28 118 aa11.21□□□□□ -0.61
VPS26A-201ENST00000263559 GAGE12JA6NER3 117 aa11.21□□□□□ -0.61
VPS26A-201ENST00000263559 GAGE1Q13065 139 aa11.21□□□□□ -0.61
VPS26A-201ENST00000263559 GAGE4Q13068 117 aa11.21□□□□□ -0.61
VPS26A-201ENST00000263559 GAGE5Q13069 117 aa11.21□□□□□ -0.61
VPS26A-201ENST00000263559 FHL2Q14192 279 aa11.21□□□□□ -0.61
VPS26A-201ENST00000263559 GAGE13Q4V321 117 aa11.21□□□□□ -0.61
VPS26A-201ENST00000263559 MRPL52Q86TS9 123 aaKnown RBP11.21□□□□□ -0.61
VPS26A-201ENST00000263559 LINC00612Q8N6U2 182 aa11.21□□□□□ -0.61
VPS26A-201ENST00000263559 OR11H2Q8NH07 326 aa11.21□□□□□ -0.61
VPS26A-201ENST00000263559 PCP2Q8IVA1 136 aa11.21□□□□□ -0.62
VPS26A-201ENST00000263559 MAST4O15021 2626 aa11.21□□□□□ -0.62
VPS26A-201ENST00000263559 TRBV6-4A0A1B0GX49 114 aa11.2□□□□□ -0.62
VPS26A-201ENST00000263559 BOD1L2Q8IYS8 172 aa11.2□□□□□ -0.62
VPS26A-201ENST00000263559 IGLV4-69A0A075B6H9 119 aa11.2□□□□□ -0.62
VPS26A-201ENST00000263559 IGLV4-3A0A075B6K6 122 aa11.2□□□□□ -0.62
VPS26A-201ENST00000263559 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.2□□□□□ -0.62
VPS26A-201ENST00000263559 IGKV2-29A2NJV5 120 aaPredicted RBP11.2□□□□□ -0.62
VPS26A-201ENST00000263559 UBE2D3P61077 147 aa11.2□□□□□ -0.62
VPS26A-201ENST00000263559 UBE2D2P62837 147 aa11.2□□□□□ -0.62
VPS26A-201ENST00000263559 CEMP1Q6PRD7 247 aaPredicted RBP11.2□□□□□ -0.62
VPS26A-201ENST00000263559 PYGO1Q9Y3Y4 419 aa11.2□□□□□ -0.62
VPS26A-201ENST00000263559 LOC100131303A0A0U1RQF7 123 aa11.19□□□□□ -0.62
VPS26A-201ENST00000263559 BATFQ16520 125 aa11.19□□□□□ -0.62
VPS26A-201ENST00000263559 FAM104AQ969W3 186 aa11.19□□□□□ -0.62
VPS26A-201ENST00000263559 DEFB4AO15263 64 aa11.19□□□□□ -0.62
VPS26A-201ENST00000263559 EGFEM1PQ0D2K5 195 aa11.19□□□□□ -0.62
VPS26A-201ENST00000263559 LBHQ53QV2 105 aaPredicted RBP11.19□□□□□ -0.62
VPS26A-201ENST00000263559 C2orf88Q9BSF0 95 aa11.19□□□□□ -0.62
VPS26A-201ENST00000263559 PKD1L1Q8TDX9 2849 aa11.18□□□□□ -0.62
VPS26A-201ENST00000263559 C2orf91Q6ZV80 131 aa11.18□□□□□ -0.62
VPS26A-201ENST00000263559 DAZ4Q86SG3 579 aaKnown RBP11.18□□□□□ -0.62
VPS26A-201ENST00000263559 TTTY13Q9BZ97 58 aa11.18□□□□□ -0.62
VPS26A-201ENST00000263559 DAZ3Q9NR90 486 aaKnown RBP11.18□□□□□ -0.62
VPS26A-201ENST00000263559 C11orf86A6NJI1 115 aa11.18□□□□□ -0.62
VPS26A-201ENST00000263559 FAM222AQ5U5X8 452 aa11.18□□□□□ -0.62
VPS26A-201ENST00000263559 UBE2D4Q9Y2X8 147 aa11.18□□□□□ -0.62
VPS26A-201ENST00000263559 IGHV4-28A0A0C4DH34 117 aa11.17□□□□□ -0.62
VPS26A-201ENST00000263559 COL6A5A8TX70 2615 aa11.17□□□□□ -0.62
VPS26A-201ENST00000263559 HINT1P49773 126 aaPredicted RBP11.17□□□□□ -0.62
VPS26A-201ENST00000263559 NTM-AS1Q6ZSK4 140 aa11.17□□□□□ -0.62
VPS26A-201ENST00000263559 RNF183Q96D59 192 aa11.17□□□□□ -0.62
VPS26A-201ENST00000263559 VCX2Q9H322 139 aa11.17□□□□□ -0.62
VPS26A-201ENST00000263559 DLEU1O43261 78 aa11.16□□□□□ -0.62
VPS26A-201ENST00000263559 LYRM9A8MSI8 78 aa11.16□□□□□ -0.62
VPS26A-201ENST00000263559 PAPPA-AS1Q5QFB9 102 aa11.15□□□□□ -0.62
VPS26A-201ENST00000263559 Q8NAQ8 132 aa11.15□□□□□ -0.62
VPS26A-201ENST00000263559 SPANXA1Q9NS26 97 aa11.15□□□□□ -0.62
VPS26A-201ENST00000263559 AMELXQ99217 191 aa11.15□□□□□ -0.62
VPS26A-201ENST00000263559 PRADC1Q9BSG0 188 aa11.15□□□□□ -0.62
VPS26A-201ENST00000263559 MIFP14174 115 aa11.14□□□□□ -0.63
VPS26A-201ENST00000263559 MPV17L2Q567V2 206 aa11.14□□□□□ -0.63
VPS26A-201ENST00000263559 RNASE13Q5GAN3 156 aaKnown RBP11.14□□□□□ -0.63
VPS26A-201ENST00000263559 G3V4G9 280 aa11.14□□□□□ -0.63
VPS26A-201ENST00000263559 TRAV8-6A0A0B4J262 113 aa11.13□□□□□ -0.63
VPS26A-201ENST00000263559 NPSP0C0P6 89 aa11.13□□□□□ -0.63
VPS26A-201ENST00000263559 CRYBA4P53673 196 aa11.13□□□□□ -0.63
VPS26A-201ENST00000263559 MAPKAPK5-AS1Q8N8E1 139 aa11.13□□□□□ -0.63
VPS26A-201ENST00000263559 LINC00694P0DN24 101 aa11.12□□□□□ -0.63
VPS26A-201ENST00000263559 NFE4Q86UQ8 179 aa11.12□□□□□ -0.63
VPS26A-201ENST00000263559 A0A0J9YXV3 536 aa11.12□□□□□ -0.63
VPS26A-201ENST00000263559 A0A1B0GV90 55 aa11.12□□□□□ -0.63
VPS26A-201ENST00000263559 SIVA1O15304 175 aa11.12□□□□□ -0.63
VPS26A-201ENST00000263559 TMEM170BQ5T4T1 132 aa11.12□□□□□ -0.63
VPS26A-201ENST00000263559 Q6ZUT4 128 aa11.12□□□□□ -0.63
VPS26A-201ENST00000263559 CHAC1Q9BUX1 264 aa11.12□□□□□ -0.63
VPS26A-201ENST00000263559 GTSF1LQ9H1H1 148 aa11.12□□□□□ -0.63
VPS26A-201ENST00000263559 A8MZ25 164 aa11.12□□□□□ -0.63
VPS26A-201ENST00000263559 E9PLD3 99 aa11.12□□□□□ -0.63
VPS26A-201ENST00000263559 SBSPONQ8IVN8 264 aa11.12□□□□□ -0.63
VPS26A-201ENST00000263559 CELA1Q9UNI1 258 aa11.12□□□□□ -0.63
VPS26A-201ENST00000263559 TMEM97Q5BJF2 176 aa11.11□□□□□ -0.63
VPS26A-201ENST00000263559 TIMM21Q9BVV7 248 aa11.11□□□□□ -0.63
VPS26A-201ENST00000263559 DGAT2L7PQ6IED9 249 aa11.1□□□□□ -0.63
VPS26A-201ENST00000263559 DAD1P61803 113 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms