RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 IGLV4-3A0A075B6K6 122 aa11.1□□□□□ -0.63
XRCC1-201ENST00000262887 DEFB121Q5J5C9 76 aa11.1□□□□□ -0.63
XRCC1-201ENST00000262887 C3orf22Q8N5N4 141 aa11.1□□□□□ -0.63
XRCC1-201ENST00000262887 TMEM101Q96IK0 257 aa11.1□□□□□ -0.63
XRCC1-201ENST00000262887 MOB4Q9Y3A3 225 aa11.1□□□□□ -0.63
XRCC1-201ENST00000262887 HERVK_113P63121 156 aa11.09□□□□□ -0.63
XRCC1-201ENST00000262887 C19orf54Q5BKX5 351 aa11.09□□□□□ -0.63
XRCC1-201ENST00000262887 A0A1B0GX51 115 aa11.08□□□□□ -0.63
XRCC1-201ENST00000262887 ADAMTSL4-AS1Q5T5F5 129 aa11.08□□□□□ -0.63
XRCC1-201ENST00000262887 SPANXDQ9BXN6 97 aa11.08□□□□□ -0.63
XRCC1-201ENST00000262887 SPANXCQ9NY87 97 aa11.08□□□□□ -0.63
XRCC1-201ENST00000262887 FAM236AA0A1B0GUQ0 79 aa11.08□□□□□ -0.64
XRCC1-201ENST00000262887 FAM236BA0A1B0GV22 79 aa11.08□□□□□ -0.64
XRCC1-201ENST00000262887 LST1O00453 97 aa11.08□□□□□ -0.64
XRCC1-201ENST00000262887 MYO18BQ8IUG5 2567 aa11.08□□□□□ -0.64
XRCC1-201ENST00000262887 TRGV11A0A075B6L2 103 aa11.07□□□□□ -0.64
XRCC1-201ENST00000262887 I3L3M4 83 aa11.07□□□□□ -0.64
XRCC1-201ENST00000262887 CCL21O00585 134 aa11.07□□□□□ -0.64
XRCC1-201ENST00000262887 Q6ZSV7 163 aa11.07□□□□□ -0.64
XRCC1-201ENST00000262887 C9orf85Q96MD7 179 aa11.07□□□□□ -0.64
XRCC1-201ENST00000262887 IGHV3-16A0A0C4DH30 117 aa11.07□□□□□ -0.64
XRCC1-201ENST00000262887 CDSNQ15517 529 aa11.07□□□□□ -0.64
XRCC1-201ENST00000262887 IMUPQ9GZP8 106 aa11.07□□□□□ -0.64
XRCC1-201ENST00000262887 PRRC2AP48634 2157 aaKnown RBP11.06□□□□□ -0.64
XRCC1-201ENST00000262887 TRAV8-3A0A0A6YYJ7 113 aa11.06□□□□□ -0.64
XRCC1-201ENST00000262887 UQCRQO14949 82 aa11.06□□□□□ -0.64
XRCC1-201ENST00000262887 NPC2P61916 151 aa11.06□□□□□ -0.64
XRCC1-201ENST00000262887 MIAQ16674 131 aa11.06□□□□□ -0.64
XRCC1-201ENST00000262887 NDUFA12Q9UI09 145 aa11.06□□□□□ -0.64
XRCC1-201ENST00000262887 CD28P10747 220 aa11.05□□□□□ -0.64
XRCC1-201ENST00000262887 OR13C6PQ8NH95 151 aa11.05□□□□□ -0.64
XRCC1-201ENST00000262887 LINC00526Q96FQ7 95 aa11.05□□□□□ -0.64
XRCC1-201ENST00000262887 USP24Q9UPU5 2620 aa11.05□□□□□ -0.64
XRCC1-201ENST00000262887 DAZ1Q9NQZ3 744 aaKnown RBP11.05□□□□□ -0.64
XRCC1-201ENST00000262887 TRAV12-2A0A075B6T6 113 aa11.04□□□□□ -0.64
XRCC1-201ENST00000262887 IGHV3OR16-10A0A075B7F0 116 aa11.04□□□□□ -0.64
XRCC1-201ENST00000262887 IGHV1-58A0A0C4DH39 117 aa11.04□□□□□ -0.64
XRCC1-201ENST00000262887 USMG5Q96IX5 58 aa11.04□□□□□ -0.64
XRCC1-201ENST00000262887 MRPS36P82909 103 aaKnown RBP11.04□□□□□ -0.64
XRCC1-201ENST00000262887 CEMP1Q6PRD7 247 aaPredicted RBP11.04□□□□□ -0.64
XRCC1-201ENST00000262887 TMEM61Q8N0U2 210 aa11.04□□□□□ -0.64
XRCC1-201ENST00000262887 KLK5Q9Y337 293 aaPredicted RBP11.04□□□□□ -0.64
XRCC1-201ENST00000262887 IGKV3-20P01619 116 aa11.04□□□□□ -0.64
XRCC1-201ENST00000262887 RPS28P62857 69 aaKnown RBP11.04□□□□□ -0.64
XRCC1-201ENST00000262887 EDN2P20800 178 aa11.03□□□□□ -0.64
XRCC1-201ENST00000262887 EDA2RQ9HAV5 297 aa11.03□□□□□ -0.64
XRCC1-201ENST00000262887 PYGO1Q9Y3Y4 419 aa11.02□□□□□ -0.65
XRCC1-201ENST00000262887 ACYP1P07311 99 aa11.02□□□□□ -0.65
XRCC1-201ENST00000262887 DCANP1Q8TF63 244 aa11.02□□□□□ -0.65
XRCC1-201ENST00000262887 RNASE13Q5GAN3 156 aaKnown RBP11.01□□□□□ -0.65
XRCC1-201ENST00000262887 CITED2Q99967 270 aaPredicted RBP11.01□□□□□ -0.65
XRCC1-201ENST00000262887 HIVEP3Q5T1R4 2406 aa11.01□□□□□ -0.65
XRCC1-201ENST00000262887 VSIG2Q96IQ7 327 aa11.01□□□□□ -0.65
XRCC1-201ENST00000262887 A8MZ25 164 aa11□□□□□ -0.65
XRCC1-201ENST00000262887 ATP5G1P05496 136 aa11□□□□□ -0.65
XRCC1-201ENST00000262887 FAM104AQ969W3 186 aa11□□□□□ -0.65
XRCC1-201ENST00000262887 BPESC1Q9GZL8 116 aa11□□□□□ -0.65
XRCC1-201ENST00000262887 IGHV1OR15-1A0A075B7D0 117 aa11□□□□□ -0.65
XRCC1-201ENST00000262887 LMO4P61968 165 aa11□□□□□ -0.65
XRCC1-201ENST00000262887 H3BUA1 57 aa10.99□□□□□ -0.65
XRCC1-201ENST00000262887 LY6EQ16553 131 aa10.99□□□□□ -0.65
XRCC1-201ENST00000262887 BRD3OSQ6XYD6 125 aa10.99□□□□□ -0.65
XRCC1-201ENST00000262887 SPG11Q96JI7 2443 aa10.99□□□□□ -0.65
XRCC1-201ENST00000262887 ADORA2A-AS1P86434 159 aa10.99□□□□□ -0.65
XRCC1-201ENST00000262887 SPINK13Q1W4C9 94 aa10.98□□□□□ -0.65
XRCC1-201ENST00000262887 TINCRA0A1B0GVN0 87 aa10.98□□□□□ -0.65
XRCC1-201ENST00000262887 A0A1W2PPR1 153 aa10.98□□□□□ -0.65
XRCC1-201ENST00000262887 TIMM17BO60830 172 aa10.98□□□□□ -0.65
XRCC1-201ENST00000262887 GAGE2AQ6NT46 116 aa10.97□□□□□ -0.65
XRCC1-201ENST00000262887 DUX5Q96PT3 197 aa10.97□□□□□ -0.65
XRCC1-201ENST00000262887 USP9XQ93008 2570 aaPredicted RBP10.97□□□□□ -0.65
XRCC1-201ENST00000262887 POLQO75417 2590 aa10.97□□□□□ -0.65
XRCC1-201ENST00000262887 IGHV3-73A0A0B4J1V6 119 aa10.97□□□□□ -0.65
XRCC1-201ENST00000262887 IGHG2P01859 326 aa10.97□□□□□ -0.65
XRCC1-201ENST00000262887 DAND5Q8N907 189 aa10.97□□□□□ -0.65
XRCC1-201ENST00000262887 COX7CP15954 63 aa10.96□□□□□ -0.66
XRCC1-201ENST00000262887 LINC00643Q86TS7 51 aa10.96□□□□□ -0.66
XRCC1-201ENST00000262887 SMCR5Q8TEV8 140 aa10.96□□□□□ -0.66
XRCC1-201ENST00000262887 ZNF462Q96JM2 2506 aa10.95□□□□□ -0.66
XRCC1-201ENST00000262887 K7EMT4 169 aa10.95□□□□□ -0.66
XRCC1-201ENST00000262887 SNRPD3P62318 126 aaKnown RBP10.95□□□□□ -0.66
XRCC1-201ENST00000262887 NBPF19A0A087WUL8 3843 aa10.95□□□□□ -0.66
XRCC1-201ENST00000262887 LRRK2Q5S007 2527 aa10.95□□□□□ -0.66
XRCC1-201ENST00000262887 CRYGAP11844 174 aa10.94□□□□□ -0.66
XRCC1-201ENST00000262887 FAM208BQ5VWN6 2430 aa10.94□□□□□ -0.66
XRCC1-201ENST00000262887 BLCAPP62952 87 aa10.94□□□□□ -0.66
XRCC1-201ENST00000262887 F5H768 121 aa10.94□□□□□ -0.66
XRCC1-201ENST00000262887 PROK1P58294 105 aa10.94□□□□□ -0.66
XRCC1-201ENST00000262887 COX7A2LO14548 114 aa10.93□□□□□ -0.66
XRCC1-201ENST00000262887 CHD6Q8TD26 2715 aa10.93□□□□□ -0.66
XRCC1-201ENST00000262887 H3BUX3 64 aa10.93□□□□□ -0.66
XRCC1-201ENST00000262887 K7ENP7 123 aa10.92□□□□□ -0.66
XRCC1-201ENST00000262887 HTN1P15515 57 aa10.92□□□□□ -0.66
XRCC1-201ENST00000262887 CIRBPQ14011 172 aaKnown RBP10.92□□□□□ -0.66
XRCC1-201ENST00000262887 CUBNO60494 3623 aa10.92□□□□□ -0.66
XRCC1-201ENST00000262887 NDUFA1O15239 70 aa10.92□□□□□ -0.66
XRCC1-201ENST00000262887 IGLV1-40P01703 118 aa10.92□□□□□ -0.66
XRCC1-201ENST00000262887 C2orf48Q96LS8 159 aa10.92□□□□□ -0.66
XRCC1-201ENST00000262887 UBE2D4Q9Y2X8 147 aa10.92□□□□□ -0.66
XRCC1-201ENST00000262887 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms