RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 TENM3Q9P273 2699 aa19.79■□□□□ 0.76
SMARCD3-201ENST00000262188 IGHV3-16A0A0C4DH30 117 aa19.79■□□□□ 0.76
SMARCD3-201ENST00000262188 FXYD2P54710 66 aa19.79■□□□□ 0.76
SMARCD3-201ENST00000262188 XGP55808 180 aa19.79■□□□□ 0.76
SMARCD3-201ENST00000262188 CEND1Q8N111 149 aa19.79■□□□□ 0.76
SMARCD3-201ENST00000262188 RNASE3P12724 160 aaKnown RBP19.78■□□□□ 0.76
SMARCD3-201ENST00000262188 EMP1P54849 157 aa19.77■□□□□ 0.76
SMARCD3-201ENST00000262188 RRN3P1Q2M238 152 aa19.77■□□□□ 0.76
SMARCD3-201ENST00000262188 C18orf15Q96N68 181 aa19.77■□□□□ 0.76
SMARCD3-201ENST00000262188 NCR2O95944 276 aa19.77■□□□□ 0.75
SMARCD3-201ENST00000262188 S100A4P26447 101 aaKnown RBP19.77■□□□□ 0.75
SMARCD3-201ENST00000262188 ASIPP42127 132 aa19.77■□□□□ 0.75
SMARCD3-201ENST00000262188 C11orf72Q8NBR9 251 aa19.77■□□□□ 0.75
SMARCD3-201ENST00000262188 HUWE1Q7Z6Z7 4374 aaKnown RBP19.76■□□□□ 0.75
SMARCD3-201ENST00000262188 DNAH9Q9NYC9 4486 aa19.76■□□□□ 0.75
SMARCD3-201ENST00000262188 ARMS2P0C7Q2 107 aa19.76■□□□□ 0.75
SMARCD3-201ENST00000262188 PGLYRP4Q96LB8 373 aa19.76■□□□□ 0.75
SMARCD3-201ENST00000262188 LINC00467Q9BRT7 94 aa19.76■□□□□ 0.75
SMARCD3-201ENST00000262188 CHAC1Q9BUX1 264 aa19.76■□□□□ 0.75
SMARCD3-201ENST00000262188 PPDPFLQ8WWR9 84 aa19.75■□□□□ 0.75
SMARCD3-201ENST00000262188 TRGV11A0A075B6L2 103 aa19.74■□□□□ 0.75
SMARCD3-201ENST00000262188 PLAC8L1A1L4L8 177 aa19.74■□□□□ 0.75
SMARCD3-201ENST00000262188 IGLC6P0CF74 106 aa19.74■□□□□ 0.75
SMARCD3-201ENST00000262188 Q6Q795 121 aa19.74■□□□□ 0.75
SMARCD3-201ENST00000262188 LYZL1Q6UWQ5 148 aa19.74■□□□□ 0.75
SMARCD3-201ENST00000262188 PRELID3AQ96N28 172 aa19.74■□□□□ 0.75
SMARCD3-201ENST00000262188 A0A087WX48 190 aa19.74■□□□□ 0.75
SMARCD3-201ENST00000262188 RHODO00212 210 aa19.74■□□□□ 0.75
SMARCD3-201ENST00000262188 MUC4Q99102 2169 aa19.73■□□□□ 0.75
SMARCD3-201ENST00000262188 IGHV4-28A0A0C4DH34 117 aa19.73■□□□□ 0.75
SMARCD3-201ENST00000262188 TMEM263Q8WUH6 116 aaKnown RBP19.73■□□□□ 0.75
SMARCD3-201ENST00000262188 TM2D3Q9BRN9 247 aa19.73■□□□□ 0.75
SMARCD3-201ENST00000262188 NHLRC4P0CG21 123 aaPredicted RBP19.72■□□□□ 0.75
SMARCD3-201ENST00000262188 NHP2Q9NX24 153 aaKnown RBP19.72■□□□□ 0.75
SMARCD3-201ENST00000262188 Q8NAQ8 132 aa19.72■□□□□ 0.75
SMARCD3-201ENST00000262188 TMEM126AQ9H061 195 aa19.72■□□□□ 0.75
SMARCD3-201ENST00000262188 CFAP126Q5VTH2 177 aa19.71■□□□□ 0.75
SMARCD3-201ENST00000262188 PCP2Q8IVA1 136 aa19.71■□□□□ 0.75
SMARCD3-201ENST00000262188 PRSS3P2Q8NHM4 247 aa19.71■□□□□ 0.75
SMARCD3-201ENST00000262188 NMUP48645 174 aa19.7■□□□□ 0.74
SMARCD3-201ENST00000262188 ZNF415Q09FC8 603 aa19.7■□□□□ 0.74
SMARCD3-201ENST00000262188 C9orf85Q96MD7 179 aa19.7■□□□□ 0.74
SMARCD3-201ENST00000262188 TP53TG1Q9Y2A0 90 aa19.7■□□□□ 0.74
SMARCD3-201ENST00000262188 C16orf74Q96GX8 76 aa19.7■□□□□ 0.74
SMARCD3-201ENST00000262188 B9D2Q9BPU9 175 aa19.7■□□□□ 0.74
SMARCD3-201ENST00000262188 NOP10Q9NPE3 64 aaKnown RBP19.7■□□□□ 0.74
SMARCD3-201ENST00000262188 COL7A1Q02388 2944 aa19.69■□□□□ 0.74
SMARCD3-201ENST00000262188 C12orf74Q32Q52 190 aa19.69■□□□□ 0.74
SMARCD3-201ENST00000262188 C5orf47Q569G3 176 aa19.69■□□□□ 0.74
SMARCD3-201ENST00000262188 MAP1LC3AQ9H492 121 aa19.69■□□□□ 0.74
SMARCD3-201ENST00000262188 MSRB1Q9NZV6 116 aa19.68■□□□□ 0.74
SMARCD3-201ENST00000262188 M0R381 172 aa19.68■□□□□ 0.74
SMARCD3-201ENST00000262188 PRSS29PA6NIE9 313 aa19.67■□□□□ 0.74
SMARCD3-201ENST00000262188 NDUFV3P56181 108 aaKnown RBP19.67■□□□□ 0.74
SMARCD3-201ENST00000262188 CACNG7P62955 275 aa19.67■□□□□ 0.74
SMARCD3-201ENST00000262188 IL17DQ8TAD2 202 aa19.67■□□□□ 0.74
SMARCD3-201ENST00000262188 PHLDA3Q9Y5J5 127 aa19.67■□□□□ 0.74
SMARCD3-201ENST00000262188 SMIM9A6NGZ8 99 aa19.66■□□□□ 0.74
SMARCD3-201ENST00000262188 K7ERJ3 54 aa19.66■□□□□ 0.74
SMARCD3-201ENST00000262188 MIFP14174 115 aa19.65■□□□□ 0.74
SMARCD3-201ENST00000262188 RIGQ13278 110 aa19.65■□□□□ 0.74
SMARCD3-201ENST00000262188 LYRM7Q5U5X0 104 aa19.65■□□□□ 0.74
SMARCD3-201ENST00000262188 ZNF493Q6ZR52 646 aa19.65■□□□□ 0.74
SMARCD3-201ENST00000262188 HBDP02042 147 aa19.64■□□□□ 0.74
SMARCD3-201ENST00000262188 ZMAT4Q9H898 229 aa19.64■□□□□ 0.74
SMARCD3-201ENST00000262188 Q6ZTI0 123 aa19.64■□□□□ 0.73
SMARCD3-201ENST00000262188 TEN1Q86WV5 123 aa19.64■□□□□ 0.73
SMARCD3-201ENST00000262188 JPT2Q9H910 190 aa19.64■□□□□ 0.73
SMARCD3-201ENST00000262188 A0A096LNJ9 63 aa19.63■□□□□ 0.73
SMARCD3-201ENST00000262188 IFI27L1Q96BM0 104 aa19.63■□□□□ 0.73
SMARCD3-201ENST00000262188 CELA1Q9UNI1 258 aa19.63■□□□□ 0.73
SMARCD3-201ENST00000262188 SPANXN1Q5VSR9 72 aa19.63■□□□□ 0.73
SMARCD3-201ENST00000262188 TRBV25-1A0A075B6N4 114 aa19.62■□□□□ 0.73
SMARCD3-201ENST00000262188 TRGV1A0A0A0MS02 117 aa19.62■□□□□ 0.73
SMARCD3-201ENST00000262188 EVI2AP22794 236 aa19.62■□□□□ 0.73
SMARCD3-201ENST00000262188 GAGE2BQ13066 116 aa19.62■□□□□ 0.73
SMARCD3-201ENST00000262188 ZNF876PQ49A33 203 aa19.62■□□□□ 0.73
SMARCD3-201ENST00000262188 GAGE2EQ4V326 116 aa19.62■□□□□ 0.73
SMARCD3-201ENST00000262188 GAGE2DQ9UEU5 116 aa19.62■□□□□ 0.73
SMARCD3-201ENST00000262188 MED14OSP0DP75 135 aa19.61■□□□□ 0.73
SMARCD3-201ENST00000262188 IFITM1P13164 125 aa19.61■□□□□ 0.73
SMARCD3-201ENST00000262188 PTH2Q96A98 100 aa19.61■□□□□ 0.73
SMARCD3-201ENST00000262188 FBN3Q75N90 2809 aa19.61■□□□□ 0.73
SMARCD3-201ENST00000262188 A0A0J9YWU9 116 aa19.6■□□□□ 0.73
SMARCD3-201ENST00000262188 A0A1B0GUT8 65 aa19.6■□□□□ 0.73
SMARCD3-201ENST00000262188 M0QXV9 152 aa19.6■□□□□ 0.73
SMARCD3-201ENST00000262188 M0R2P5 195 aa19.6■□□□□ 0.73
SMARCD3-201ENST00000262188 TWIST1Q15672 202 aa19.6■□□□□ 0.73
SMARCD3-201ENST00000262188 FAM222AQ5U5X8 452 aa19.6■□□□□ 0.73
SMARCD3-201ENST00000262188 NFE4Q86UQ8 179 aa19.6■□□□□ 0.73
SMARCD3-201ENST00000262188 DAZ2Q13117 558 aaKnown RBP19.59■□□□□ 0.73
SMARCD3-201ENST00000262188 U3KQK5 164 aa19.59■□□□□ 0.73
SMARCD3-201ENST00000262188 DEFB130BP0DP73 79 aa19.58■□□□□ 0.73
SMARCD3-201ENST00000262188 DEFB130AP0DP74 79 aa19.58■□□□□ 0.73
SMARCD3-201ENST00000262188 TTC32Q5I0X7 151 aa19.58■□□□□ 0.73
SMARCD3-201ENST00000262188 CNFNQ9BYD5 112 aa19.57■□□□□ 0.72
SMARCD3-201ENST00000262188 SMCPP49901 116 aaPredicted RBP19.56■□□□□ 0.72
SMARCD3-201ENST00000262188 DKK2Q9UBU2 259 aa19.56■□□□□ 0.72
SMARCD3-201ENST00000262188 NXPH4O95158 308 aa19.55■□□□□ 0.72
SMARCD3-201ENST00000262188 A0A087WWL8 130 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms