RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 TEX43Q6ZNM6 134 aa10.97□□□□□ -0.65
CCDC90B-201ENST00000260054 TRBV6-5A0A0K0K1A5 114 aa10.96□□□□□ -0.65
CCDC90B-201ENST00000260054 APLNQ9ULZ1 77 aa10.96□□□□□ -0.65
CCDC90B-201ENST00000260054 PPP1R17O96001 155 aa10.95□□□□□ -0.66
CCDC90B-201ENST00000260054 ALKBH7Q9BT30 221 aaPredicted RBP10.95□□□□□ -0.66
CCDC90B-201ENST00000260054 ST20Q9HBF5 79 aa10.95□□□□□ -0.66
CCDC90B-201ENST00000260054 IGHV3-38A0A0C4DH36 116 aa10.95□□□□□ -0.66
CCDC90B-201ENST00000260054 SDHAF1A6NFY7 115 aa10.95□□□□□ -0.66
CCDC90B-201ENST00000260054 Q0VG73 95 aa10.95□□□□□ -0.66
CCDC90B-201ENST00000260054 CASC10Q5T4H9 136 aa10.95□□□□□ -0.66
CCDC90B-201ENST00000260054 ATP6V0E2Q8NHE4 81 aa10.95□□□□□ -0.66
CCDC90B-201ENST00000260054 PLECQ15149 4684 aaKnown RBP10.94□□□□□ -0.66
CCDC90B-201ENST00000260054 C3orf84H3BNL1 204 aa10.94□□□□□ -0.66
CCDC90B-201ENST00000260054 SUMO2P61956 95 aaKnown RBP10.94□□□□□ -0.66
CCDC90B-201ENST00000260054 NEGR1Q7Z3B1 354 aa10.94□□□□□ -0.66
CCDC90B-201ENST00000260054 MIEN1Q9BRT3 115 aa10.94□□□□□ -0.66
CCDC90B-201ENST00000260054 TMEM70Q9BUB7 260 aa10.94□□□□□ -0.66
CCDC90B-201ENST00000260054 LAMTOR2Q9Y2Q5 125 aa10.94□□□□□ -0.66
CCDC90B-201ENST00000260054 NUPR1O60356 82 aa10.93□□□□□ -0.66
CCDC90B-201ENST00000260054 POLR2KP53803 58 aaKnown RBP10.93□□□□□ -0.66
CCDC90B-201ENST00000260054 DEFB104AQ8WTQ1 72 aa10.93□□□□□ -0.66
CCDC90B-201ENST00000260054 C20orf78Q9BR46 151 aa10.93□□□□□ -0.66
CCDC90B-201ENST00000260054 BTF3P20290 206 aaKnown RBP10.92□□□□□ -0.66
CCDC90B-201ENST00000260054 SH2D6Q7Z4S9 175 aa10.92□□□□□ -0.66
CCDC90B-201ENST00000260054 DAZ4Q86SG3 579 aaKnown RBP10.92□□□□□ -0.66
CCDC90B-201ENST00000260054 DAZ3Q9NR90 486 aaKnown RBP10.92□□□□□ -0.66
CCDC90B-201ENST00000260054 TENM2Q9NT68 2774 aa10.92□□□□□ -0.66
CCDC90B-201ENST00000260054 TCTAP57738 103 aa10.92□□□□□ -0.66
CCDC90B-201ENST00000260054 TRBV27A0A0K0K1C4 114 aa10.91□□□□□ -0.66
CCDC90B-201ENST00000260054 PRSS47A8MTI9 375 aa10.91□□□□□ -0.66
CCDC90B-201ENST00000260054 LINC00310P59036 64 aa10.91□□□□□ -0.66
CCDC90B-201ENST00000260054 LYPD5Q6UWN5 251 aa10.91□□□□□ -0.66
CCDC90B-201ENST00000260054 SMIM2Q9BVW6 85 aa10.91□□□□□ -0.66
CCDC90B-201ENST00000260054 GTSF1LQ9H1H1 148 aa10.91□□□□□ -0.66
CCDC90B-201ENST00000260054 LOC389332A0A1B0GUA5 103 aa10.9□□□□□ -0.66
CCDC90B-201ENST00000260054 DLEU1O43261 78 aa10.9□□□□□ -0.66
CCDC90B-201ENST00000260054 SERF1AO75920 110 aa10.9□□□□□ -0.66
CCDC90B-201ENST00000260054 ESRGQ1W209 222 aa10.9□□□□□ -0.66
CCDC90B-201ENST00000260054 VAMP8Q9BV40 100 aa10.9□□□□□ -0.66
CCDC90B-201ENST00000260054 MAP1LC3AQ9H492 121 aa10.9□□□□□ -0.66
CCDC90B-201ENST00000260054 VCYO14598 125 aa10.89□□□□□ -0.67
CCDC90B-201ENST00000260054 ZNF25P17030 456 aaPredicted RBP10.89□□□□□ -0.67
CCDC90B-201ENST00000260054 RPL32P62910 135 aaKnown RBP10.89□□□□□ -0.67
CCDC90B-201ENST00000260054 NTM-AS1Q6ZSK4 140 aa10.89□□□□□ -0.67
CCDC90B-201ENST00000260054 BAGE3Q86Y29 109 aa10.89□□□□□ -0.67
CCDC90B-201ENST00000260054 IGLV2-18A0A075B6J9 118 aa10.89□□□□□ -0.67
CCDC90B-201ENST00000260054 I3L3M4 83 aa10.89□□□□□ -0.67
CCDC90B-201ENST00000260054 LINC00614P0C842 121 aa10.89□□□□□ -0.67
CCDC90B-201ENST00000260054 PMCHP20382 165 aa10.89□□□□□ -0.67
CCDC90B-201ENST00000260054 G0S2P27469 103 aa10.89□□□□□ -0.67
CCDC90B-201ENST00000260054 C18orf32Q8TCD1 76 aa10.89□□□□□ -0.67
CCDC90B-201ENST00000260054 TSHBP01222 138 aa10.87□□□□□ -0.67
CCDC90B-201ENST00000260054 IFI27P40305 119 aaPredicted RBP10.87□□□□□ -0.67
CCDC90B-201ENST00000260054 TIRAPP58753 221 aa10.87□□□□□ -0.67
CCDC90B-201ENST00000260054 COTL1Q14019 142 aa10.87□□□□□ -0.67
CCDC90B-201ENST00000260054 LINC00588Q9Y4M8 146 aa10.87□□□□□ -0.67
CCDC90B-201ENST00000260054 TRBV6-8A0A0A6YYG3 113 aa10.86□□□□□ -0.67
CCDC90B-201ENST00000260054 Q8N8P6 123 aa10.86□□□□□ -0.67
CCDC90B-201ENST00000260054 KIR2DL4Q99706 377 aa10.86□□□□□ -0.67
CCDC90B-201ENST00000260054 CCL18P55774 89 aa10.85□□□□□ -0.67
CCDC90B-201ENST00000260054 LELP1Q5T871 98 aa10.85□□□□□ -0.67
CCDC90B-201ENST00000260054 LYSTQ99698 3801 aa10.85□□□□□ -0.67
CCDC90B-201ENST00000260054 TMEM97Q5BJF2 176 aa10.85□□□□□ -0.67
CCDC90B-201ENST00000260054 PRSS3P2Q8NHM4 247 aa10.85□□□□□ -0.67
CCDC90B-201ENST00000260054 NXT2Q9NPJ8 142 aaKnown RBP10.85□□□□□ -0.67
CCDC90B-201ENST00000260054 FCER1GP30273 86 aa10.84□□□□□ -0.67
CCDC90B-201ENST00000260054 URB1-AS1Q96HZ7 61 aa10.84□□□□□ -0.67
CCDC90B-201ENST00000260054 PAM16Q9Y3D7 125 aa10.84□□□□□ -0.67
CCDC90B-201ENST00000260054 IGHV1-24A0A0C4DH33 117 aa10.83□□□□□ -0.68
CCDC90B-201ENST00000260054 AMTP48728 403 aa10.83□□□□□ -0.68
CCDC90B-201ENST00000260054 COL5A1-AS1Q5SY13 56 aa10.83□□□□□ -0.68
CCDC90B-201ENST00000260054 Q8N976 141 aa10.83□□□□□ -0.68
CCDC90B-201ENST00000260054 CHCHD7Q9BUK0 85 aa10.83□□□□□ -0.68
CCDC90B-201ENST00000260054 MRPS16Q9Y3D3 137 aaKnown RBP10.83□□□□□ -0.68
CCDC90B-201ENST00000260054 TRBV25-1A0A075B6N4 114 aa10.82□□□□□ -0.68
CCDC90B-201ENST00000260054 NIT1Q86X76 327 aa10.82□□□□□ -0.68
CCDC90B-201ENST00000260054 WFDC10BQ8IUB3 73 aa10.82□□□□□ -0.68
CCDC90B-201ENST00000260054 UQCR10Q9UDW1 63 aa10.82□□□□□ -0.68
CCDC90B-201ENST00000260054 LINC01546A6NGU7 62 aa10.81□□□□□ -0.68
CCDC90B-201ENST00000260054 FA2HQ7L5A8 372 aa10.81□□□□□ -0.68
CCDC90B-201ENST00000260054 UBE2DNLQ8IWF7 75 aa10.81□□□□□ -0.68
CCDC90B-201ENST00000260054 UPK3BQ9BT76 320 aa10.81□□□□□ -0.68
CCDC90B-201ENST00000260054 TMEM243Q9BU79 118 aa10.81□□□□□ -0.68
CCDC90B-201ENST00000260054 KRTDAPP60985 99 aa10.8□□□□□ -0.68
CCDC90B-201ENST00000260054 SPATA45Q537H7 98 aa10.8□□□□□ -0.68
CCDC90B-201ENST00000260054 CHCHD5Q9BSY4 110 aa10.8□□□□□ -0.68
CCDC90B-201ENST00000260054 CBY1Q9Y3M2 126 aa10.8□□□□□ -0.68
CCDC90B-201ENST00000260054 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.79□□□□□ -0.68
CCDC90B-201ENST00000260054 TRAV8-6A0A0B4J262 113 aa10.79□□□□□ -0.68
CCDC90B-201ENST00000260054 IGKV2-29A2NJV5 120 aaPredicted RBP10.79□□□□□ -0.68
CCDC90B-201ENST00000260054 K7EMI3 77 aa10.79□□□□□ -0.68
CCDC90B-201ENST00000260054 LAGE3Q14657 143 aa10.79□□□□□ -0.68
CCDC90B-201ENST00000260054 NPSP0C0P6 89 aa10.79□□□□□ -0.68
CCDC90B-201ENST00000260054 LGALS9CQ6DKI2 356 aa10.79□□□□□ -0.68
CCDC90B-201ENST00000260054 RNASEKQ6P5S7 137 aaKnown RBP10.79□□□□□ -0.68
CCDC90B-201ENST00000260054 AP5S1Q9NUS5 200 aa10.79□□□□□ -0.68
CCDC90B-201ENST00000260054 C20orf202A1L168 122 aa10.78□□□□□ -0.68
CCDC90B-201ENST00000260054 IGLC3P0DOY3 106 aa10.78□□□□□ -0.68
CCDC90B-201ENST00000260054 GAGE6Q13070 117 aa10.78□□□□□ -0.68
CCDC90B-201ENST00000260054 PMCHL1Q16048 86 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms