RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 U3KQK5 164 aa6.63□□□□□ -1.35
CKAP2-201ENST00000258607 IGLV10-54A0A075B6I4 117 aa6.62□□□□□ -1.35
CKAP2-201ENST00000258607 TRGV11A0A075B6L2 103 aa6.62□□□□□ -1.35
CKAP2-201ENST00000258607 M0QY20 66 aa6.62□□□□□ -1.35
CKAP2-201ENST00000258607 COX11Q9Y6N1 276 aa6.62□□□□□ -1.35
CKAP2-201ENST00000258607 IGLV2-18A0A075B6J9 118 aa6.62□□□□□ -1.35
CKAP2-201ENST00000258607 F8VRH5 84 aa6.62□□□□□ -1.35
CKAP2-201ENST00000258607 H7C1H1 209 aa6.62□□□□□ -1.35
CKAP2-201ENST00000258607 KRTAP10-3P60369 221 aa6.62□□□□□ -1.35
CKAP2-201ENST00000258607 ZNF415Q09FC8 603 aa6.62□□□□□ -1.35
CKAP2-201ENST00000258607 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.62□□□□□ -1.35
CKAP2-201ENST00000258607 ORAOV1Q8WV07 137 aa6.62□□□□□ -1.35
CKAP2-201ENST00000258607 MRAP2Q96G30 205 aa6.62□□□□□ -1.35
CKAP2-201ENST00000258607 CHCHD5Q9BSY4 110 aa6.62□□□□□ -1.35
CKAP2-201ENST00000258607 MORN3Q6PF18 240 aaPredicted RBP6.61□□□□□ -1.35
CKAP2-201ENST00000258607 SVIPQ8NHG7 77 aa6.61□□□□□ -1.35
CKAP2-201ENST00000258607 HHLA3Q9XRX5 114 aa6.61□□□□□ -1.35
CKAP2-201ENST00000258607 A0A087WX48 190 aa6.61□□□□□ -1.35
CKAP2-201ENST00000258607 TAX1BP3O14907 124 aa6.61□□□□□ -1.35
CKAP2-201ENST00000258607 GEMIN7Q9H840 131 aaKnown RBP6.61□□□□□ -1.35
CKAP2-201ENST00000258607 SCGB1C2P0DMR2 95 aa6.61□□□□□ -1.35
CKAP2-201ENST00000258607 LGALS3P17931 250 aaKnown RBP6.61□□□□□ -1.35
CKAP2-201ENST00000258607 LINC00315P59091 139 aa6.61□□□□□ -1.35
CKAP2-201ENST00000258607 Q6ZUT4 128 aa6.61□□□□□ -1.35
CKAP2-201ENST00000258607 C1orf158Q8N1D5 194 aa6.61□□□□□ -1.35
CKAP2-201ENST00000258607 VPS25Q9BRG1 176 aa6.61□□□□□ -1.35
CKAP2-201ENST00000258607 LINC00467Q9BRT7 94 aa6.61□□□□□ -1.35
CKAP2-201ENST00000258607 FSHBP01225 129 aa6.6□□□□□ -1.35
CKAP2-201ENST00000258607 COTL1Q14019 142 aa6.6□□□□□ -1.35
CKAP2-201ENST00000258607 CNFNQ9BYD5 112 aa6.6□□□□□ -1.35
CKAP2-201ENST00000258607 LENEPQ9Y5L5 61 aa6.6□□□□□ -1.35
CKAP2-201ENST00000258607 TSHBP01222 138 aa6.6□□□□□ -1.35
CKAP2-201ENST00000258607 M0R2P5 195 aa6.6□□□□□ -1.35
CKAP2-201ENST00000258607 LINC00694P0DN24 101 aa6.6□□□□□ -1.35
CKAP2-201ENST00000258607 RETNQ9HD89 108 aa6.6□□□□□ -1.35
CKAP2-201ENST00000258607 MRPS16Q9Y3D3 137 aaKnown RBP6.6□□□□□ -1.35
CKAP2-201ENST00000258607 SPCS1Q9Y6A9 102 aa6.6□□□□□ -1.35
CKAP2-201ENST00000258607 TSPEAR-AS2P59090 65 aa6.59□□□□□ -1.35
CKAP2-201ENST00000258607 CFAP126Q5VTH2 177 aa6.59□□□□□ -1.35
CKAP2-201ENST00000258607 LRRC75A-AS1Q8N1F1 130 aa6.59□□□□□ -1.35
CKAP2-201ENST00000258607 POM121L12Q8N7R1 296 aa6.59□□□□□ -1.35
CKAP2-201ENST00000258607 RNASE8Q8TDE3 154 aaKnown RBP6.59□□□□□ -1.35
CKAP2-201ENST00000258607 ANK3Q12955 4377 aaKnown RBP6.58□□□□□ -1.36
CKAP2-201ENST00000258607 H3BMG7 143 aa6.58□□□□□ -1.36
CKAP2-201ENST00000258607 I3L3M4 83 aa6.58□□□□□ -1.36
CKAP2-201ENST00000258607 PSMB2P49721 201 aa6.58□□□□□ -1.36
CKAP2-201ENST00000258607 TRPT1Q86TN4 253 aaKnown RBP6.58□□□□□ -1.36
CKAP2-201ENST00000258607 Q8N3U1 123 aa6.58□□□□□ -1.36
CKAP2-201ENST00000258607 LINC00526Q96FQ7 95 aa6.58□□□□□ -1.36
CKAP2-201ENST00000258607 KIF25-AS1Q9Y6Z4 181 aa6.58□□□□□ -1.36
CKAP2-201ENST00000258607 TMEM89A2RUT3 159 aa6.58□□□□□ -1.36
CKAP2-201ENST00000258607 UBE2L6O14933 153 aa6.58□□□□□ -1.36
CKAP2-201ENST00000258607 SLC25A29Q8N8R3 303 aa6.58□□□□□ -1.36
CKAP2-201ENST00000258607 CSMD3Q7Z407 3707 aa6.58□□□□□ -1.36
CKAP2-201ENST00000258607 A6NDN8 102 aa6.58□□□□□ -1.36
CKAP2-201ENST00000258607 PMVKQ15126 192 aa6.58□□□□□ -1.36
CKAP2-201ENST00000258607 LINC01549A6NIU2 74 aa6.57□□□□□ -1.36
CKAP2-201ENST00000258607 LGALS9O00182 355 aa6.57□□□□□ -1.36
CKAP2-201ENST00000258607 BOD1L2Q8IYS8 172 aa6.57□□□□□ -1.36
CKAP2-201ENST00000258607 NEXN-AS1Q8NBZ9 246 aa6.57□□□□□ -1.36
CKAP2-201ENST00000258607 TOMM6Q96B49 74 aa6.57□□□□□ -1.36
CKAP2-201ENST00000258607 SMIM13P0DJ93 91 aa6.57□□□□□ -1.36
CKAP2-201ENST00000258607 HILS1P60008 231 aa6.57□□□□□ -1.36
CKAP2-201ENST00000258607 C5orf38Q86SI9 138 aa6.57□□□□□ -1.36
CKAP2-201ENST00000258607 CST9LQ9H4G1 147 aa6.57□□□□□ -1.36
CKAP2-201ENST00000258607 PGPEP1Q9NXJ5 209 aa6.57□□□□□ -1.36
CKAP2-201ENST00000258607 LBHQ53QV2 105 aaPredicted RBP6.57□□□□□ -1.36
CKAP2-201ENST00000258607 C9orf85Q96MD7 179 aa6.57□□□□□ -1.36
CKAP2-201ENST00000258607 POLR2KP53803 58 aaKnown RBP6.56□□□□□ -1.36
CKAP2-201ENST00000258607 SAMD5Q5TGI4 173 aa6.56□□□□□ -1.36
CKAP2-201ENST00000258607 COX8CQ7Z4L0 72 aa6.56□□□□□ -1.36
CKAP2-201ENST00000258607 CYSRT1A8MQ03 144 aa6.56□□□□□ -1.36
CKAP2-201ENST00000258607 F5H768 121 aa6.56□□□□□ -1.36
CKAP2-201ENST00000258607 HERVK_113P61574 105 aa6.56□□□□□ -1.36
CKAP2-201ENST00000258607 HSD52Q0P140 79 aa6.56□□□□□ -1.36
CKAP2-201ENST00000258607 MEIG1Q5JSS6 88 aa6.56□□□□□ -1.36
CKAP2-201ENST00000258607 FAM19A4Q96LR4 140 aa6.56□□□□□ -1.36
CKAP2-201ENST00000258607 C20orf78Q9BR46 151 aa6.56□□□□□ -1.36
CKAP2-201ENST00000258607 PLNP26678 52 aa6.55□□□□□ -1.36
CKAP2-201ENST00000258607 DEFB121Q5J5C9 76 aa6.55□□□□□ -1.36
CKAP2-201ENST00000258607 SH2D6Q7Z4S9 175 aa6.55□□□□□ -1.36
CKAP2-201ENST00000258607 MYMXA0A1B0GTQ4 84 aa6.55□□□□□ -1.36
CKAP2-201ENST00000258607 PFN2P35080 140 aa6.55□□□□□ -1.36
CKAP2-201ENST00000258607 C20orf203Q8NBC4 194 aa6.55□□□□□ -1.36
CKAP2-201ENST00000258607 J3QQQ9 107 aa6.55□□□□□ -1.36
CKAP2-201ENST00000258607 RNASE1P07998 156 aaKnown RBP6.55□□□□□ -1.36
CKAP2-201ENST00000258607 FABP2P12104 132 aa6.55□□□□□ -1.36
CKAP2-201ENST00000258607 XCL1P47992 114 aa6.55□□□□□ -1.36
CKAP2-201ENST00000258607 RPL36AP83881 106 aaKnown RBP6.55□□□□□ -1.36
CKAP2-201ENST00000258607 UBE2V1Q13404 147 aa6.55□□□□□ -1.36
CKAP2-201ENST00000258607 RPL36ALQ969Q0 106 aaKnown RBP6.55□□□□□ -1.36
CKAP2-201ENST00000258607 PTH2Q96A98 100 aa6.55□□□□□ -1.36
CKAP2-201ENST00000258607 CDKN2A-AS1Q9UH64 79 aa6.55□□□□□ -1.36
CKAP2-201ENST00000258607 TGP01266 2768 aa6.54□□□□□ -1.36
CKAP2-201ENST00000258607 IGLV4-3A0A075B6K6 122 aa6.54□□□□□ -1.36
CKAP2-201ENST00000258607 C3orf56Q8N813 242 aa6.54□□□□□ -1.36
CKAP2-201ENST00000258607 DNAJC30Q96LL9 226 aa6.54□□□□□ -1.36
CKAP2-201ENST00000258607 A8MWV9 139 aa6.54□□□□□ -1.36
CKAP2-201ENST00000258607 TIMM21Q9BVV7 248 aa6.54□□□□□ -1.36
CKAP2-201ENST00000258607 NXPH4O95158 308 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms