RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 LAGE3Q14657 143 aa8.46□□□□□ -1.06
PDE6B-201ENST00000255622 DEFB104AQ8WTQ1 72 aa8.46□□□□□ -1.06
PDE6B-201ENST00000255622 IGHV4-30-2A0A087WSY4 118 aa8.46□□□□□ -1.06
PDE6B-201ENST00000255622 RNASE4P34096 147 aaKnown RBP8.46□□□□□ -1.06
PDE6B-201ENST00000255622 C14orf178Q8N769 122 aaPredicted RBP8.46□□□□□ -1.06
PDE6B-201ENST00000255622 RPL39LQ96EH5 51 aaKnown RBP8.46□□□□□ -1.06
PDE6B-201ENST00000255622 CCL19Q99731 98 aa8.46□□□□□ -1.06
PDE6B-201ENST00000255622 MYO9AB2RTY4 2548 aa8.46□□□□□ -1.06
PDE6B-201ENST00000255622 GNRH2O43555 120 aa8.45□□□□□ -1.06
PDE6B-201ENST00000255622 RPL13AP40429 203 aaKnown RBP8.45□□□□□ -1.06
PDE6B-201ENST00000255622 DPH3P1Q9H4G8 78 aa8.45□□□□□ -1.06
PDE6B-201ENST00000255622 CCDC168Q8NDH2 2452 aa8.45□□□□□ -1.06
PDE6B-201ENST00000255622 PTPN13Q12923 2485 aa8.45□□□□□ -1.06
PDE6B-201ENST00000255622 NDUFA4O00483 81 aa8.45□□□□□ -1.06
PDE6B-201ENST00000255622 IGHV4-4A0A075B6R2 117 aa8.44□□□□□ -1.06
PDE6B-201ENST00000255622 S100A4P26447 101 aaKnown RBP8.44□□□□□ -1.06
PDE6B-201ENST00000255622 FBN2P35556 2912 aa8.44□□□□□ -1.06
PDE6B-201ENST00000255622 NACAE9PAV3 2078 aa8.44□□□□□ -1.06
PDE6B-201ENST00000255622 AVPP01185 164 aa8.44□□□□□ -1.06
PDE6B-201ENST00000255622 MXRA5Q9NR99 2828 aa8.44□□□□□ -1.06
PDE6B-201ENST00000255622 EPG5Q9HCE0 2579 aa8.44□□□□□ -1.06
PDE6B-201ENST00000255622 IGHG2P01859 326 aa8.43□□□□□ -1.06
PDE6B-201ENST00000255622 MGPP08493 103 aa8.43□□□□□ -1.06
PDE6B-201ENST00000255622 RHPN1-AS1Q9BWJ2 59 aa8.43□□□□□ -1.06
PDE6B-201ENST00000255622 SONP18583 2426 aaKnown RBP8.43□□□□□ -1.06
PDE6B-201ENST00000255622 NDUFA11Q86Y39 141 aa8.43□□□□□ -1.06
PDE6B-201ENST00000255622 SMIM2Q9BVW6 85 aa8.43□□□□□ -1.06
PDE6B-201ENST00000255622 PHLDA3Q9Y5J5 127 aa8.43□□□□□ -1.06
PDE6B-201ENST00000255622 A6NDX4 124 aa8.42□□□□□ -1.06
PDE6B-201ENST00000255622 LINC01620Q4KN68 170 aa8.42□□□□□ -1.06
PDE6B-201ENST00000255622 TRAV21A0A0B4J279 112 aa8.42□□□□□ -1.06
PDE6B-201ENST00000255622 C10orf99Q6UWK7 81 aa8.42□□□□□ -1.06
PDE6B-201ENST00000255622 TP53TG1Q9Y2A0 90 aa8.42□□□□□ -1.06
PDE6B-201ENST00000255622 MUC4Q99102 2169 aa8.42□□□□□ -1.06
PDE6B-201ENST00000255622 ZNF815PA8K554 130 aa8.42□□□□□ -1.06
PDE6B-201ENST00000255622 FAM19A1Q7Z5A9 133 aa8.42□□□□□ -1.06
PDE6B-201ENST00000255622 STHQ8IWL8 128 aa8.42□□□□□ -1.06
PDE6B-201ENST00000255622 RNASE3P12724 160 aaKnown RBP8.41□□□□□ -1.06
PDE6B-201ENST00000255622 NPC2P61916 151 aa8.41□□□□□ -1.06
PDE6B-201ENST00000255622 PMAIP1Q13794 54 aa8.41□□□□□ -1.06
PDE6B-201ENST00000255622 DOPEY1Q5JWR5 2465 aa8.41□□□□□ -1.06
PDE6B-201ENST00000255622 RNF223E7ERA6 249 aa8.41□□□□□ -1.06
PDE6B-201ENST00000255622 SUMO2P61956 95 aaKnown RBP8.41□□□□□ -1.06
PDE6B-201ENST00000255622 PSMG4Q5JS54 123 aa8.41□□□□□ -1.06
PDE6B-201ENST00000255622 LENEPQ9Y5L5 61 aa8.41□□□□□ -1.06
PDE6B-201ENST00000255622 USMG5Q96IX5 58 aa8.41□□□□□ -1.06
PDE6B-201ENST00000255622 MSMBP08118 114 aa8.4□□□□□ -1.06
PDE6B-201ENST00000255622 ATOX1O00244 68 aa8.4□□□□□ -1.07
PDE6B-201ENST00000255622 NDUFC2O95298 119 aa8.39□□□□□ -1.07
PDE6B-201ENST00000255622 UBE2D1P51668 147 aa8.39□□□□□ -1.07
PDE6B-201ENST00000255622 SYNJ2BPP57105 145 aa8.39□□□□□ -1.07
PDE6B-201ENST00000255622 SCGB3A1Q96QR1 104 aa8.39□□□□□ -1.07
PDE6B-201ENST00000255622 DAZ1Q9NQZ3 744 aaKnown RBP8.39□□□□□ -1.07
PDE6B-201ENST00000255622 PRO1854Q9UHT4 67 aa8.39□□□□□ -1.07
PDE6B-201ENST00000255622 SORL1Q92673 2214 aa8.39□□□□□ -1.07
PDE6B-201ENST00000255622 IGLV1-40P01703 118 aa8.39□□□□□ -1.07
PDE6B-201ENST00000255622 ATXN8Q156A1 80 aa8.39□□□□□ -1.07
PDE6B-201ENST00000255622 NEXN-AS1Q8NBZ9 246 aa8.39□□□□□ -1.07
PDE6B-201ENST00000255622 IMUPQ9GZP8 106 aa8.39□□□□□ -1.07
PDE6B-201ENST00000255622 IGKV3-20P01619 116 aa8.39□□□□□ -1.07
PDE6B-201ENST00000255622 ELANEP08246 267 aa8.39□□□□□ -1.07
PDE6B-201ENST00000255622 SS18Q15532 418 aa8.39□□□□□ -1.07
PDE6B-201ENST00000255622 S100A7L2Q5SY68 101 aa8.39□□□□□ -1.07
PDE6B-201ENST00000255622 PLEKHB2Q96CS7 222 aa8.39□□□□□ -1.07
PDE6B-201ENST00000255622 MAPK1IP1LQ8NDC0 245 aa8.38□□□□□ -1.07
PDE6B-201ENST00000255622 NAV2Q8IVL1 2488 aa8.38□□□□□ -1.07
PDE6B-201ENST00000255622 NOTCH2Q04721 2471 aa8.38□□□□□ -1.07
PDE6B-201ENST00000255622 ZNF462Q96JM2 2506 aa8.38□□□□□ -1.07
PDE6B-201ENST00000255622 RHOHQ15669 191 aa8.38□□□□□ -1.07
PDE6B-201ENST00000255622 TOMM6Q96B49 74 aa8.38□□□□□ -1.07
PDE6B-201ENST00000255622 A0A087WWL8 130 aa8.37□□□□□ -1.07
PDE6B-201ENST00000255622 TRAV12-3A0A0B4J271 114 aa8.37□□□□□ -1.07
PDE6B-201ENST00000255622 IGHV4-59P01825 116 aa8.37□□□□□ -1.07
PDE6B-201ENST00000255622 ATP5G1P05496 136 aa8.37□□□□□ -1.07
PDE6B-201ENST00000255622 CFC1BP0CG36 223 aa8.37□□□□□ -1.07
PDE6B-201ENST00000255622 CFC1P0CG37 223 aa8.37□□□□□ -1.07
PDE6B-201ENST00000255622 C2orf66Q6UXQ4 117 aa8.37□□□□□ -1.07
PDE6B-201ENST00000255622 KLHL30-AS1Q8NEE0 82 aa8.37□□□□□ -1.07
PDE6B-201ENST00000255622 ANKRD17O75179 2603 aaKnown RBP8.37□□□□□ -1.07
PDE6B-201ENST00000255622 H3BUA1 57 aa8.37□□□□□ -1.07
PDE6B-201ENST00000255622 CFHR3Q02985 330 aa8.37□□□□□ -1.07
PDE6B-201ENST00000255622 PRIMA1Q86XR5 153 aa8.37□□□□□ -1.07
PDE6B-201ENST00000255622 TRAV12-2A0A075B6T6 113 aa8.37□□□□□ -1.07
PDE6B-201ENST00000255622 F8VRH5 84 aa8.37□□□□□ -1.07
PDE6B-201ENST00000255622 PLNP26678 52 aa8.37□□□□□ -1.07
PDE6B-201ENST00000255622 ORMDL2Q53FV1 153 aa8.37□□□□□ -1.07
PDE6B-201ENST00000255622 DCANP1Q8TF63 244 aa8.37□□□□□ -1.07
PDE6B-201ENST00000255622 PEMTQ9UBM1 199 aa8.37□□□□□ -1.07
PDE6B-201ENST00000255622 TRBV10-2A0A0K0K1G8 114 aa8.36□□□□□ -1.07
PDE6B-201ENST00000255622 APRG1Q8IVJ8 170 aa8.36□□□□□ -1.07
PDE6B-201ENST00000255622 TMEM243Q9BU79 118 aa8.36□□□□□ -1.07
PDE6B-201ENST00000255622 ZNF469Q96JG9 3925 aaPredicted RBP8.36□□□□□ -1.07
PDE6B-201ENST00000255622 KLLNB2CW77 178 aa8.35□□□□□ -1.07
PDE6B-201ENST00000255622 LINC00315P59091 139 aa8.35□□□□□ -1.07
PDE6B-201ENST00000255622 DEFB112Q30KQ8 113 aa8.35□□□□□ -1.07
PDE6B-201ENST00000255622 KIF25-AS1Q9Y6Z4 181 aa8.35□□□□□ -1.07
PDE6B-201ENST00000255622 TRAV12-1A0A0B4J245 112 aa8.34□□□□□ -1.07
PDE6B-201ENST00000255622 H3BT86 120 aa8.34□□□□□ -1.07
PDE6B-201ENST00000255622 RBM3P98179 157 aaKnown RBP8.34□□□□□ -1.07
PDE6B-201ENST00000255622 FAM74A4Q5TZK3 123 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms