RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 H0YGX0 51 aa11.13□□□□□ -0.63
UBE4B-201ENST00000253251 NPSP0C0P6 89 aa11.13□□□□□ -0.63
UBE4B-201ENST00000253251 BBC3Q96PG8 261 aaPredicted RBP11.13□□□□□ -0.63
UBE4B-201ENST00000253251 GTSF1LQ9H1H1 148 aa11.13□□□□□ -0.63
UBE4B-201ENST00000253251 GAGE2BQ13066 116 aa11.13□□□□□ -0.63
UBE4B-201ENST00000253251 GAGE2EQ4V326 116 aa11.13□□□□□ -0.63
UBE4B-201ENST00000253251 EDA2RQ9HAV5 297 aa11.13□□□□□ -0.63
UBE4B-201ENST00000253251 GAGE2DQ9UEU5 116 aa11.13□□□□□ -0.63
UBE4B-201ENST00000253251 DEFB4AO15263 64 aa11.13□□□□□ -0.63
UBE4B-201ENST00000253251 C9orf85Q96MD7 179 aa11.13□□□□□ -0.63
UBE4B-201ENST00000253251 RNF185Q96GF1 192 aa11.13□□□□□ -0.63
UBE4B-201ENST00000253251 WNK1Q9H4A3 2382 aa11.13□□□□□ -0.63
UBE4B-201ENST00000253251 TRBV27A0A0K0K1C4 114 aa11.12□□□□□ -0.63
UBE4B-201ENST00000253251 ESM1Q9NQ30 184 aa11.12□□□□□ -0.63
UBE4B-201ENST00000253251 MRGPRG-AS1Q2M3A8 158 aa11.12□□□□□ -0.63
UBE4B-201ENST00000253251 COX8CQ7Z4L0 72 aa11.12□□□□□ -0.63
UBE4B-201ENST00000253251 SND1-IT1Q9HBX3 110 aa11.12□□□□□ -0.63
UBE4B-201ENST00000253251 H3BQ85 93 aa11.12□□□□□ -0.63
UBE4B-201ENST00000253251 RNASE3P12724 160 aaKnown RBP11.11□□□□□ -0.63
UBE4B-201ENST00000253251 NEXN-AS1Q8NBZ9 246 aa11.11□□□□□ -0.63
UBE4B-201ENST00000253251 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.11□□□□□ -0.63
UBE4B-201ENST00000253251 SPANXDQ9BXN6 97 aa11.11□□□□□ -0.63
UBE4B-201ENST00000253251 IGLV10-54A0A075B6I4 117 aa11.11□□□□□ -0.63
UBE4B-201ENST00000253251 CDPF1Q6NVV7 123 aa11.11□□□□□ -0.63
UBE4B-201ENST00000253251 PYGO1Q9Y3Y4 419 aa11.11□□□□□ -0.63
UBE4B-201ENST00000253251 SPAG11BQ08648 103 aa11.1□□□□□ -0.63
UBE4B-201ENST00000253251 KLK12Q9UKR0 248 aa11.1□□□□□ -0.63
UBE4B-201ENST00000253251 ARHGAP32A7KAX9 2087 aa11.1□□□□□ -0.63
UBE4B-201ENST00000253251 C18orf65Q6ZTR6 163 aa11.1□□□□□ -0.63
UBE4B-201ENST00000253251 Q6ZUT4 128 aa11.1□□□□□ -0.63
UBE4B-201ENST00000253251 RAI1Q7Z5J4 1906 aaPredicted RBP11.1□□□□□ -0.63
UBE4B-201ENST00000253251 TRAV26-1A0A087WT03 109 aa11.1□□□□□ -0.63
UBE4B-201ENST00000253251 MUSTN1Q8IVN3 82 aa11.1□□□□□ -0.63
UBE4B-201ENST00000253251 CDK2AP2O75956 126 aa11.09□□□□□ -0.63
UBE4B-201ENST00000253251 K7ERJ3 54 aa11.09□□□□□ -0.63
UBE4B-201ENST00000253251 GAGE2AQ6NT46 116 aa11.09□□□□□ -0.63
UBE4B-201ENST00000253251 TMEM126AQ9H061 195 aa11.09□□□□□ -0.63
UBE4B-201ENST00000253251 A4D1N5 150 aa11.09□□□□□ -0.63
UBE4B-201ENST00000253251 ZFAND6Q6FIF0 208 aa11.09□□□□□ -0.63
UBE4B-201ENST00000253251 GOLGB1Q14789 3259 aaKnown RBP11.08□□□□□ -0.63
UBE4B-201ENST00000253251 CARD19Q96LW7 228 aa11.08□□□□□ -0.64
UBE4B-201ENST00000253251 PRR9Q5T870 116 aa11.08□□□□□ -0.64
UBE4B-201ENST00000253251 C11orf21Q9P2W6 132 aa11.08□□□□□ -0.64
UBE4B-201ENST00000253251 K7EP13 123 aa11.08□□□□□ -0.64
UBE4B-201ENST00000253251 IGLL5B9A064 214 aa11.07□□□□□ -0.64
UBE4B-201ENST00000253251 IGLV1-51P01701 117 aa11.07□□□□□ -0.64
UBE4B-201ENST00000253251 C14orf177Q52M58 125 aa11.07□□□□□ -0.64
UBE4B-201ENST00000253251 ANAPC13Q9BS18 74 aa11.07□□□□□ -0.64
UBE4B-201ENST00000253251 P0DMU3 169 aa11.07□□□□□ -0.64
UBE4B-201ENST00000253251 FAM231AP0DMU4 169 aa11.07□□□□□ -0.64
UBE4B-201ENST00000253251 FAM231CP0DMU5 169 aa11.07□□□□□ -0.64
UBE4B-201ENST00000253251 SPTBN4Q9H254 2564 aa11.07□□□□□ -0.64
UBE4B-201ENST00000253251 FAM110AQ9BQ89 295 aa11.07□□□□□ -0.64
UBE4B-201ENST00000253251 MYO9AB2RTY4 2548 aa11.06□□□□□ -0.64
UBE4B-201ENST00000253251 TIRAPP58753 221 aa11.06□□□□□ -0.64
UBE4B-201ENST00000253251 TRBV6-8A0A0A6YYG3 113 aa11.06□□□□□ -0.64
UBE4B-201ENST00000253251 UBE2BP63146 152 aa11.06□□□□□ -0.64
UBE4B-201ENST00000253251 OCIAD2Q56VL3 154 aa11.06□□□□□ -0.64
UBE4B-201ENST00000253251 PTPRBP23467 1997 aa11.06□□□□□ -0.64
UBE4B-201ENST00000253251 IGLV4-3A0A075B6K6 122 aa11.05□□□□□ -0.64
UBE4B-201ENST00000253251 DEFB131BA0A096LNP1 70 aa11.05□□□□□ -0.64
UBE4B-201ENST00000253251 NRACQ8N912 160 aa11.05□□□□□ -0.64
UBE4B-201ENST00000253251 CITED1Q99966 193 aa11.05□□□□□ -0.64
UBE4B-201ENST00000253251 LINC00467Q9BRT7 94 aa11.05□□□□□ -0.64
UBE4B-201ENST00000253251 LINC00482Q8N8I6 264 aa11.05□□□□□ -0.64
UBE4B-201ENST00000253251 ETDBQ3ZM63 59 aa11.05□□□□□ -0.64
UBE4B-201ENST00000253251 Q8N2B8 174 aa11.05□□□□□ -0.64
UBE4B-201ENST00000253251 ORMDL1Q9P0S3 153 aa11.05□□□□□ -0.64
UBE4B-201ENST00000253251 ODF3L2Q3SX64 289 aa11.04□□□□□ -0.64
UBE4B-201ENST00000253251 UBL5Q9BZL1 73 aa11.04□□□□□ -0.64
UBE4B-201ENST00000253251 RPL18AQ02543 176 aaKnown RBP11.04□□□□□ -0.64
UBE4B-201ENST00000253251 DSCR8Q96T75 97 aa11.04□□□□□ -0.64
UBE4B-201ENST00000253251 H3BMG7 143 aa11.04□□□□□ -0.64
UBE4B-201ENST00000253251 REG3AQ06141 175 aa11.04□□□□□ -0.64
UBE4B-201ENST00000253251 OPRPNQ99935 248 aaPredicted RBP11.04□□□□□ -0.64
UBE4B-201ENST00000253251 CRYGDP07320 174 aa11.04□□□□□ -0.64
UBE4B-201ENST00000253251 POLR2KP53803 58 aaKnown RBP11.04□□□□□ -0.64
UBE4B-201ENST00000253251 TRAV10A0A0B4J240 114 aa11.03□□□□□ -0.64
UBE4B-201ENST00000253251 C15orf53Q8NAA6 179 aa11.03□□□□□ -0.64
UBE4B-201ENST00000253251 MYO18BQ8IUG5 2567 aa11.03□□□□□ -0.64
UBE4B-201ENST00000253251 NACAE9PAV3 2078 aa11.03□□□□□ -0.64
UBE4B-201ENST00000253251 IGHV4-28A0A0C4DH34 117 aa11.03□□□□□ -0.64
UBE4B-201ENST00000253251 ETDCA0A1B0GVM5 59 aa11.03□□□□□ -0.64
UBE4B-201ENST00000253251 GAGE12HA6NDE8 117 aa11.03□□□□□ -0.64
UBE4B-201ENST00000253251 FXYD2P54710 66 aa11.02□□□□□ -0.65
UBE4B-201ENST00000253251 UFSP1Q6NVU6 142 aa11.02□□□□□ -0.65
UBE4B-201ENST00000253251 HIST1H4AP62805 103 aaKnown RBP11.01□□□□□ -0.65
UBE4B-201ENST00000253251 MIAQ16674 131 aa11.01□□□□□ -0.65
UBE4B-201ENST00000253251 CEMP1Q6PRD7 247 aaPredicted RBP11.01□□□□□ -0.65
UBE4B-201ENST00000253251 CLUHP3Q96NS8 147 aa11.01□□□□□ -0.65
UBE4B-201ENST00000253251 TANC2Q9HCD6 1990 aa11.01□□□□□ -0.65
UBE4B-201ENST00000253251 MRPS36P82909 103 aaKnown RBP11.01□□□□□ -0.65
UBE4B-201ENST00000253251 ZNF22P17026 224 aaPredicted RBP11.01□□□□□ -0.65
UBE4B-201ENST00000253251 A0A0J9YXY3 114 aa11□□□□□ -0.65
UBE4B-201ENST00000253251 LINC00269Q8N2A0 174 aa11□□□□□ -0.65
UBE4B-201ENST00000253251 TTTY13Q9BZ97 58 aa11□□□□□ -0.65
UBE4B-201ENST00000253251 BAALC-AS2P0C853 105 aa11□□□□□ -0.65
UBE4B-201ENST00000253251 MIR7-3HGQ8N6C7 128 aa11□□□□□ -0.65
UBE4B-201ENST00000253251 SMR3AQ99954 134 aa11□□□□□ -0.65
UBE4B-201ENST00000253251 CHD8Q9HCK8 2581 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms