RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 GAGE2DQ9UEU5 116 aa8.9□□□□□ -0.98
USHBP1-201ENST00000252597 COX6B1P14854 86 aa8.9□□□□□ -0.98
USHBP1-201ENST00000252597 C2orf82Q6UX34 121 aa8.9□□□□□ -0.98
USHBP1-201ENST00000252597 IGHV1OR15-1A0A075B7D0 117 aa8.9□□□□□ -0.99
USHBP1-201ENST00000252597 POLR2KP53803 58 aaKnown RBP8.9□□□□□ -0.99
USHBP1-201ENST00000252597 BBC3Q96PG8 261 aaPredicted RBP8.9□□□□□ -0.99
USHBP1-201ENST00000252597 LENEPQ9Y5L5 61 aa8.9□□□□□ -0.99
USHBP1-201ENST00000252597 TMEM141Q96I45 108 aa8.88□□□□□ -0.99
USHBP1-201ENST00000252597 USMG5Q96IX5 58 aa8.88□□□□□ -0.99
USHBP1-201ENST00000252597 UBE2E2Q96LR5 201 aa8.88□□□□□ -0.99
USHBP1-201ENST00000252597 NDUFA12Q9UI09 145 aa8.88□□□□□ -0.99
USHBP1-201ENST00000252597 AVPP01185 164 aa8.88□□□□□ -0.99
USHBP1-201ENST00000252597 ZNF22P17026 224 aaPredicted RBP8.88□□□□□ -0.99
USHBP1-201ENST00000252597 LINC00315P59091 139 aa8.88□□□□□ -0.99
USHBP1-201ENST00000252597 NBEAL2Q6ZNJ1 2754 aa8.88□□□□□ -0.99
USHBP1-201ENST00000252597 TRAV13-1A0A0B4J241 112 aa8.88□□□□□ -0.99
USHBP1-201ENST00000252597 RHODO00212 210 aa8.88□□□□□ -0.99
USHBP1-201ENST00000252597 IGHV3-30-3P0DP02 117 aa8.88□□□□□ -0.99
USHBP1-201ENST00000252597 LINC01587Q99440 93 aa8.88□□□□□ -0.99
USHBP1-201ENST00000252597 TRAV8-4A0A0B4J246 113 aa8.87□□□□□ -0.99
USHBP1-201ENST00000252597 TRAV4A0A0B4J268 109 aa8.87□□□□□ -0.99
USHBP1-201ENST00000252597 I3L3M4 83 aa8.87□□□□□ -0.99
USHBP1-201ENST00000252597 M0QY20 66 aa8.87□□□□□ -0.99
USHBP1-201ENST00000252597 SOCS3O14543 225 aa8.87□□□□□ -0.99
USHBP1-201ENST00000252597 CRLF1O75462 422 aa8.87□□□□□ -0.99
USHBP1-201ENST00000252597 APRG1Q8IVJ8 170 aa8.87□□□□□ -0.99
USHBP1-201ENST00000252597 ITPR3Q14573 2671 aa8.87□□□□□ -0.99
USHBP1-201ENST00000252597 A0A1W2PRX2 142 aa8.87□□□□□ -0.99
USHBP1-201ENST00000252597 M0R2P5 195 aa8.87□□□□□ -0.99
USHBP1-201ENST00000252597 RS1O15537 224 aa8.87□□□□□ -0.99
USHBP1-201ENST00000252597 IGHV3-33P01772 117 aa8.87□□□□□ -0.99
USHBP1-201ENST00000252597 SCGB1A1P11684 91 aa8.87□□□□□ -0.99
USHBP1-201ENST00000252597 HELZ2Q9BYK8 2649 aaKnown RBP8.86□□□□□ -0.99
USHBP1-201ENST00000252597 UBE2D3P61077 147 aa8.86□□□□□ -0.99
USHBP1-201ENST00000252597 UBE2D2P62837 147 aa8.86□□□□□ -0.99
USHBP1-201ENST00000252597 MEIG1Q5JSS6 88 aa8.86□□□□□ -0.99
USHBP1-201ENST00000252597 C20orf203Q8NBC4 194 aa8.86□□□□□ -0.99
USHBP1-201ENST00000252597 KIF25-AS1Q9Y6Z4 181 aa8.86□□□□□ -0.99
USHBP1-201ENST00000252597 COX6CP09669 75 aa8.86□□□□□ -0.99
USHBP1-201ENST00000252597 DEFB112Q30KQ8 113 aa8.86□□□□□ -0.99
USHBP1-201ENST00000252597 LINC01620Q4KN68 170 aa8.86□□□□□ -0.99
USHBP1-201ENST00000252597 IGLV4-3A0A075B6K6 122 aa8.85□□□□□ -0.99
USHBP1-201ENST00000252597 A0A0J9YXY3 114 aa8.85□□□□□ -0.99
USHBP1-201ENST00000252597 TRIAP1O43715 76 aa8.85□□□□□ -0.99
USHBP1-201ENST00000252597 ATXN8Q156A1 80 aa8.85□□□□□ -0.99
USHBP1-201ENST00000252597 C15orf53Q8NAA6 179 aa8.85□□□□□ -0.99
USHBP1-201ENST00000252597 TIMM17AQ99595 171 aa8.85□□□□□ -0.99
USHBP1-201ENST00000252597 XCL2Q9UBD3 114 aa8.85□□□□□ -0.99
USHBP1-201ENST00000252597 IGHG2P01859 326 aa8.85□□□□□ -0.99
USHBP1-201ENST00000252597 TOMM7Q9P0U1 55 aa8.85□□□□□ -0.99
USHBP1-201ENST00000252597 LEPROTO15243 131 aa8.85□□□□□ -0.99
USHBP1-201ENST00000252597 TCTEX1D4Q5JR98 221 aa8.85□□□□□ -0.99
USHBP1-201ENST00000252597 ADAMTSL4-AS1Q5T5F5 129 aa8.85□□□□□ -0.99
USHBP1-201ENST00000252597 SLURP1P55000 103 aa8.84□□□□□ -0.99
USHBP1-201ENST00000252597 C18orf65Q6ZTR6 163 aa8.84□□□□□ -0.99
USHBP1-201ENST00000252597 DCANP1Q8TF63 244 aa8.84□□□□□ -0.99
USHBP1-201ENST00000252597 IGHV4OR15-8A0A075B7B6 117 aa8.84□□□□□ -0.99
USHBP1-201ENST00000252597 A0A087WW49 117 aa8.84□□□□□ -0.99
USHBP1-201ENST00000252597 TMEM223A0PJW6 202 aa8.84□□□□□ -0.99
USHBP1-201ENST00000252597 MSMBP08118 114 aa8.84□□□□□ -0.99
USHBP1-201ENST00000252597 RPL13AP40429 203 aaKnown RBP8.84□□□□□ -0.99
USHBP1-201ENST00000252597 ITPR2Q14571 2701 aa8.84□□□□□ -0.99
USHBP1-201ENST00000252597 KLLNB2CW77 178 aa8.83□□□□□ -1
USHBP1-201ENST00000252597 NDUFA7O95182 113 aa8.83□□□□□ -1
USHBP1-201ENST00000252597 CFHR3Q02985 330 aa8.83□□□□□ -1
USHBP1-201ENST00000252597 A0A0J9YX75 114 aa8.83□□□□□ -1
USHBP1-201ENST00000252597 TRBV27A0A0K0K1C4 114 aa8.83□□□□□ -1
USHBP1-201ENST00000252597 TMEM262E9PQX1 116 aa8.83□□□□□ -1
USHBP1-201ENST00000252597 H3BMM0 161 aa8.83□□□□□ -1
USHBP1-201ENST00000252597 DYNLRB2Q8TF09 96 aa8.83□□□□□ -1
USHBP1-201ENST00000252597 UBE2WQ96B02 151 aa8.83□□□□□ -1
USHBP1-201ENST00000252597 HOXD3P31249 432 aaPredicted RBP8.82□□□□□ -1
USHBP1-201ENST00000252597 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.82□□□□□ -1
USHBP1-201ENST00000252597 EIF4EBP3O60516 100 aaPredicted RBP8.82□□□□□ -1
USHBP1-201ENST00000252597 TMEM263Q8WUH6 116 aaKnown RBP8.81□□□□□ -1
USHBP1-201ENST00000252597 C11orf68Q9H3H3 251 aaKnown RBP8.81□□□□□ -1
USHBP1-201ENST00000252597 A6NDX4 124 aa8.81□□□□□ -1
USHBP1-201ENST00000252597 Q6ZSN1 163 aa8.81□□□□□ -1
USHBP1-201ENST00000252597 CDKN2A-AS1Q9UH64 79 aa8.81□□□□□ -1
USHBP1-201ENST00000252597 ATP6V0E2Q8NHE4 81 aa8.8□□□□□ -1
USHBP1-201ENST00000252597 ICOSQ9Y6W8 199 aa8.8□□□□□ -1
USHBP1-201ENST00000252597 TRGV1A0A0A0MS02 117 aa8.8□□□□□ -1
USHBP1-201ENST00000252597 LGALS9O00182 355 aa8.8□□□□□ -1
USHBP1-201ENST00000252597 HIST2H2BCQ6DN03 193 aa8.8□□□□□ -1
USHBP1-201ENST00000252597 ZNF843Q8N446 348 aa8.8□□□□□ -1
USHBP1-201ENST00000252597 CCDC179H3BU77 68 aa8.8□□□□□ -1
USHBP1-201ENST00000252597 LINC00467Q9BRT7 94 aa8.8□□□□□ -1
USHBP1-201ENST00000252597 GCN1Q92616 2671 aaKnown RBP8.79□□□□□ -1
USHBP1-201ENST00000252597 Q9H8V8 135 aa8.79□□□□□ -1
USHBP1-201ENST00000252597 TRGV11A0A075B6L2 103 aa8.79□□□□□ -1
USHBP1-201ENST00000252597 RBMY1A1P0DJD3 496 aaKnown RBP8.79□□□□□ -1
USHBP1-201ENST00000252597 RBMY1CP0DJD4 496 aa8.79□□□□□ -1
USHBP1-201ENST00000252597 MED14OSP0DP75 135 aa8.79□□□□□ -1
USHBP1-201ENST00000252597 RBMY1FQ15415 496 aaKnown RBP8.79□□□□□ -1
USHBP1-201ENST00000252597 POM121L12Q8N7R1 296 aa8.79□□□□□ -1
USHBP1-201ENST00000252597 LINC01619G3V211 115 aa8.79□□□□□ -1
USHBP1-201ENST00000252597 AMELXQ99217 191 aa8.79□□□□□ -1
USHBP1-201ENST00000252597 PRIMA1Q86XR5 153 aa8.78□□□□□ -1
USHBP1-201ENST00000252597 RHOHQ15669 191 aa8.78□□□□□ -1
USHBP1-201ENST00000252597 IFITM1P13164 125 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms