RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 Q6Q795 121 aa13.93□□□□□ -0.18
SNX4-201ENST00000251775 MDFICQ9P1T7 246 aa13.93□□□□□ -0.18
SNX4-201ENST00000251775 FAM208BQ5VWN6 2430 aa13.93□□□□□ -0.18
SNX4-201ENST00000251775 TRAV8-4A0A0B4J246 113 aa13.93□□□□□ -0.18
SNX4-201ENST00000251775 CCDC179H3BU77 68 aa13.93□□□□□ -0.18
SNX4-201ENST00000251775 C20orf203Q8NBC4 194 aa13.93□□□□□ -0.18
SNX4-201ENST00000251775 C9orf85Q96MD7 179 aa13.93□□□□□ -0.18
SNX4-201ENST00000251775 IGKV3-20P01619 116 aa13.92□□□□□ -0.18
SNX4-201ENST00000251775 IFITM1P13164 125 aa13.92□□□□□ -0.18
SNX4-201ENST00000251775 SYNJ2BPP57105 145 aa13.92□□□□□ -0.18
SNX4-201ENST00000251775 TTC32Q5I0X7 151 aa13.92□□□□□ -0.18
SNX4-201ENST00000251775 BBC3Q96PG8 261 aaPredicted RBP13.92□□□□□ -0.18
SNX4-201ENST00000251775 VPREB3Q9UKI3 123 aa13.92□□□□□ -0.18
SNX4-201ENST00000251775 ZANQ9Y493 2812 aa13.92□□□□□ -0.18
SNX4-201ENST00000251775 IGLV4-3A0A075B6K6 122 aa13.92□□□□□ -0.18
SNX4-201ENST00000251775 LITAFQ99732 161 aa13.92□□□□□ -0.18
SNX4-201ENST00000251775 IGHV3-16A0A0C4DH30 117 aa13.91□□□□□ -0.18
SNX4-201ENST00000251775 K7EQG2 157 aa13.91□□□□□ -0.18
SNX4-201ENST00000251775 ZFYVE26Q68DK2 2539 aa13.91□□□□□ -0.18
SNX4-201ENST00000251775 GAGE12JA6NER3 117 aa13.91□□□□□ -0.18
SNX4-201ENST00000251775 ADARB2-AS1A8MUL3 147 aa13.91□□□□□ -0.18
SNX4-201ENST00000251775 H3BMM0 161 aa13.91□□□□□ -0.18
SNX4-201ENST00000251775 GAGE7O76087 117 aa13.91□□□□□ -0.18
SNX4-201ENST00000251775 FSHBP01225 129 aa13.91□□□□□ -0.18
SNX4-201ENST00000251775 GAGE12FP0CL80 117 aa13.91□□□□□ -0.18
SNX4-201ENST00000251775 GAGE12GP0CL81 117 aa13.91□□□□□ -0.18
SNX4-201ENST00000251775 GAGE12IP0CL82 117 aa13.91□□□□□ -0.18
SNX4-201ENST00000251775 GAGE4Q13068 117 aa13.91□□□□□ -0.18
SNX4-201ENST00000251775 C15orf53Q8NAA6 179 aa13.91□□□□□ -0.18
SNX4-201ENST00000251775 UBE2WQ96B02 151 aa13.91□□□□□ -0.18
SNX4-201ENST00000251775 DUX5Q96PT3 197 aa13.91□□□□□ -0.18
SNX4-201ENST00000251775 ZNF702PQ9H963 129 aa13.91□□□□□ -0.18
SNX4-201ENST00000251775 TRAV12-2A0A075B6T6 113 aa13.9□□□□□ -0.18
SNX4-201ENST00000251775 Q6YL49 198 aa13.9□□□□□ -0.18
SNX4-201ENST00000251775 SORL1Q92673 2214 aa13.9□□□□□ -0.18
SNX4-201ENST00000251775 USP24Q9UPU5 2620 aa13.9□□□□□ -0.18
SNX4-201ENST00000251775 KRTAP10-9P60411 292 aa13.9□□□□□ -0.18
SNX4-201ENST00000251775 ZNF462Q96JM2 2506 aa13.89□□□□□ -0.19
SNX4-201ENST00000251775 IGHV3-30-3P0DP02 117 aa13.89□□□□□ -0.19
SNX4-201ENST00000251775 IGHV4-31P0DP07 118 aa13.89□□□□□ -0.19
SNX4-201ENST00000251775 SNRPD3P62318 126 aaKnown RBP13.89□□□□□ -0.19
SNX4-201ENST00000251775 SPXQ9BT56 116 aa13.88□□□□□ -0.19
SNX4-201ENST00000251775 C2orf82Q6UX34 121 aa13.88□□□□□ -0.19
SNX4-201ENST00000251775 H7C423 109 aa13.87□□□□□ -0.19
SNX4-201ENST00000251775 I3L3M4 83 aa13.87□□□□□ -0.19
SNX4-201ENST00000251775 HOXD3P31249 432 aaPredicted RBP13.87□□□□□ -0.19
SNX4-201ENST00000251775 ICOSQ9Y6W8 199 aa13.87□□□□□ -0.19
SNX4-201ENST00000251775 ADAMTSL4-AS1Q5T5F5 129 aa13.87□□□□□ -0.19
SNX4-201ENST00000251775 FAM104AQ969W3 186 aa13.86□□□□□ -0.19
SNX4-201ENST00000251775 TIMM21Q9BVV7 248 aa13.86□□□□□ -0.19
SNX4-201ENST00000251775 TRAV8-3A0A0A6YYJ7 113 aa13.86□□□□□ -0.19
SNX4-201ENST00000251775 PRSS2P07478 247 aa13.86□□□□□ -0.19
SNX4-201ENST00000251775 SPINK13Q1W4C9 94 aa13.86□□□□□ -0.19
SNX4-201ENST00000251775 UBE2E2Q96LR5 201 aa13.86□□□□□ -0.19
SNX4-201ENST00000251775 LRRK2Q5S007 2527 aa13.85□□□□□ -0.19
SNX4-201ENST00000251775 PTPN13Q12923 2485 aa13.84□□□□□ -0.19
SNX4-201ENST00000251775 PRRC2AP48634 2157 aaKnown RBP13.84□□□□□ -0.19
SNX4-201ENST00000251775 Q6ZSV7 163 aa13.84□□□□□ -0.19
SNX4-201ENST00000251775 C18orf65Q6ZTR6 163 aa13.84□□□□□ -0.19
SNX4-201ENST00000251775 CENPEQ02224 2701 aa13.84□□□□□ -0.19
SNX4-201ENST00000251775 MRPS36P82909 103 aaKnown RBP13.84□□□□□ -0.19
SNX4-201ENST00000251775 SPANXDQ9BXN6 97 aa13.84□□□□□ -0.19
SNX4-201ENST00000251775 SPANXCQ9NY87 97 aa13.84□□□□□ -0.19
SNX4-201ENST00000251775 H3BT86 120 aa13.83□□□□□ -0.2
SNX4-201ENST00000251775 ZNF843Q8N446 348 aa13.83□□□□□ -0.2
SNX4-201ENST00000251775 RNF152Q8N8N0 203 aa13.82□□□□□ -0.2
SNX4-201ENST00000251775 CLEC2BQ92478 149 aa13.82□□□□□ -0.2
SNX4-201ENST00000251775 IGHV1OR15-1A0A075B7D0 117 aa13.82□□□□□ -0.2
SNX4-201ENST00000251775 CD28P10747 220 aa13.82□□□□□ -0.2
SNX4-201ENST00000251775 DEFB136Q30KP8 78 aa13.82□□□□□ -0.2
SNX4-201ENST00000251775 MXRA5Q9NR99 2828 aa13.82□□□□□ -0.2
SNX4-201ENST00000251775 IGHV1-58A0A0C4DH39 117 aa13.81□□□□□ -0.2
SNX4-201ENST00000251775 SLURP1P55000 103 aa13.81□□□□□ -0.2
SNX4-201ENST00000251775 NDUFA12Q9UI09 145 aa13.81□□□□□ -0.2
SNX4-201ENST00000251775 PYGO1Q9Y3Y4 419 aa13.81□□□□□ -0.2
SNX4-201ENST00000251775 MIAQ16674 131 aa13.81□□□□□ -0.2
SNX4-201ENST00000251775 NPC2P61916 151 aa13.8□□□□□ -0.2
SNX4-201ENST00000251775 CEMP1Q6PRD7 247 aaPredicted RBP13.8□□□□□ -0.2
SNX4-201ENST00000251775 COX6CP09669 75 aa13.8□□□□□ -0.2
SNX4-201ENST00000251775 MRPL23Q16540 153 aaKnown RBP13.8□□□□□ -0.2
SNX4-201ENST00000251775 DEFB113Q30KQ7 82 aa13.8□□□□□ -0.2
SNX4-201ENST00000251775 UBR5O95071 2799 aaPredicted RBP13.79□□□□□ -0.2
SNX4-201ENST00000251775 A8MZ25 164 aa13.79□□□□□ -0.2
SNX4-201ENST00000251775 LST1O00453 97 aa13.79□□□□□ -0.2
SNX4-201ENST00000251775 RNASE13Q5GAN3 156 aaKnown RBP13.79□□□□□ -0.2
SNX4-201ENST00000251775 DUX3Q96PT4 197 aa13.79□□□□□ -0.2
SNX4-201ENST00000251775 DEFB121Q5J5C9 76 aa13.79□□□□□ -0.2
SNX4-201ENST00000251775 ABCA12Q86UK0 2595 aa13.78□□□□□ -0.2
SNX4-201ENST00000251775 FAM240AA0A1B0GVK7 77 aa13.78□□□□□ -0.2
SNX4-201ENST00000251775 TMEM61Q8N0U2 210 aa13.78□□□□□ -0.2
SNX4-201ENST00000251775 VSIG2Q96IQ7 327 aa13.78□□□□□ -0.2
SNX4-201ENST00000251775 RBMY1A1P0DJD3 496 aaKnown RBP13.78□□□□□ -0.2
SNX4-201ENST00000251775 RBMY1CP0DJD4 496 aa13.78□□□□□ -0.2
SNX4-201ENST00000251775 RBMY1FQ15415 496 aaKnown RBP13.78□□□□□ -0.2
SNX4-201ENST00000251775 KNCNA6PVL3 124 aa13.77□□□□□ -0.21
SNX4-201ENST00000251775 TEX15Q9BXT5 2789 aa13.76□□□□□ -0.21
SNX4-201ENST00000251775 NAV2Q8IVL1 2488 aa13.76□□□□□ -0.21
SNX4-201ENST00000251775 Q96MF0 132 aa13.76□□□□□ -0.21
SNX4-201ENST00000251775 CREBBPQ92793 2442 aa13.76□□□□□ -0.21
SNX4-201ENST00000251775 Q8N2B8 174 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms