RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 GCSHP23434 173 aa8.29□□□□□ -1.08
RFPL3-201ENST00000249007 RPS28P62857 69 aaKnown RBP8.29□□□□□ -1.08
RFPL3-201ENST00000249007 RRN3P1Q2M238 152 aa8.29□□□□□ -1.08
RFPL3-201ENST00000249007 A0A1B0GX51 115 aa8.28□□□□□ -1.08
RFPL3-201ENST00000249007 MGST1P10620 155 aaKnown RBP8.28□□□□□ -1.08
RFPL3-201ENST00000249007 IFITM1P13164 125 aa8.28□□□□□ -1.08
RFPL3-201ENST00000249007 NDUFV3P56181 108 aaKnown RBP8.28□□□□□ -1.08
RFPL3-201ENST00000249007 LINC00315P59091 139 aa8.28□□□□□ -1.08
RFPL3-201ENST00000249007 LINC01600Q96MT4 127 aa8.28□□□□□ -1.08
RFPL3-201ENST00000249007 AP5S1Q9NUS5 200 aa8.28□□□□□ -1.08
RFPL3-201ENST00000249007 MT-ATP8P03928 68 aa8.27□□□□□ -1.09
RFPL3-201ENST00000249007 DEFB130BP0DP73 79 aa8.27□□□□□ -1.09
RFPL3-201ENST00000249007 DEFB130AP0DP74 79 aa8.27□□□□□ -1.09
RFPL3-201ENST00000249007 GAGE2BQ13066 116 aa8.27□□□□□ -1.09
RFPL3-201ENST00000249007 GAGE2EQ4V326 116 aa8.27□□□□□ -1.09
RFPL3-201ENST00000249007 Q6ZRN7 208 aaPredicted RBP8.27□□□□□ -1.09
RFPL3-201ENST00000249007 H2BFWTQ7Z2G1 175 aa8.27□□□□□ -1.09
RFPL3-201ENST00000249007 TEN1Q86WV5 123 aa8.27□□□□□ -1.09
RFPL3-201ENST00000249007 CEND1Q8N111 149 aa8.27□□□□□ -1.09
RFPL3-201ENST00000249007 RNASE7Q9H1E1 156 aaKnown RBP8.27□□□□□ -1.09
RFPL3-201ENST00000249007 GAGE2DQ9UEU5 116 aa8.27□□□□□ -1.09
RFPL3-201ENST00000249007 NXPH3O95157 252 aa8.26□□□□□ -1.09
RFPL3-201ENST00000249007 GDF5OSQ5U4N7 250 aa8.26□□□□□ -1.09
RFPL3-201ENST00000249007 CFAP126Q5VTH2 177 aa8.26□□□□□ -1.09
RFPL3-201ENST00000249007 OR10J6PQ8NGY7 276 aa8.26□□□□□ -1.09
RFPL3-201ENST00000249007 RAB37Q96AX2 223 aa8.26□□□□□ -1.09
RFPL3-201ENST00000249007 PRELID3AQ96N28 172 aa8.26□□□□□ -1.09
RFPL3-201ENST00000249007 PRNDQ9UKY0 176 aa8.26□□□□□ -1.09
RFPL3-201ENST00000249007 TRBV20-1A0A075B6N2 111 aa8.26□□□□□ -1.09
RFPL3-201ENST00000249007 LYRM9A8MSI8 78 aa8.26□□□□□ -1.09
RFPL3-201ENST00000249007 SLC25A5P05141 298 aaKnown RBP8.26□□□□□ -1.09
RFPL3-201ENST00000249007 FOXA3P55318 350 aaPredicted RBP8.26□□□□□ -1.09
RFPL3-201ENST00000249007 C1orf158Q8N1D5 194 aa8.26□□□□□ -1.09
RFPL3-201ENST00000249007 C20orf78Q9BR46 151 aa8.26□□□□□ -1.09
RFPL3-201ENST00000249007 UPK3BQ9BT76 320 aa8.26□□□□□ -1.09
RFPL3-201ENST00000249007 CSDC2Q9Y534 153 aaKnown RBP8.26□□□□□ -1.09
RFPL3-201ENST00000249007 PRSS46E5RG02 174 aa8.25□□□□□ -1.09
RFPL3-201ENST00000249007 ATP5G1P05496 136 aa8.25□□□□□ -1.09
RFPL3-201ENST00000249007 MGST2Q99735 147 aa8.25□□□□□ -1.09
RFPL3-201ENST00000249007 HIGD1CA8MV81 97 aa8.24□□□□□ -1.09
RFPL3-201ENST00000249007 DEFB1P60022 68 aa8.24□□□□□ -1.09
RFPL3-201ENST00000249007 SH2D6Q7Z4S9 175 aa8.24□□□□□ -1.09
RFPL3-201ENST00000249007 DEFB104AQ8WTQ1 72 aa8.24□□□□□ -1.09
RFPL3-201ENST00000249007 LRP2P98164 4655 aa8.23□□□□□ -1.09
RFPL3-201ENST00000249007 GGTLC3B5MD39 225 aa8.23□□□□□ -1.09
RFPL3-201ENST00000249007 SNAI2O43623 268 aa8.23□□□□□ -1.09
RFPL3-201ENST00000249007 SPINK4O60575 86 aa8.23□□□□□ -1.09
RFPL3-201ENST00000249007 SNCGO76070 127 aa8.23□□□□□ -1.09
RFPL3-201ENST00000249007 PLA2G1BP04054 148 aaKnown RBP8.23□□□□□ -1.09
RFPL3-201ENST00000249007 DNAH10OSP0CZ25 163 aa8.23□□□□□ -1.09
RFPL3-201ENST00000249007 ID1P41134 155 aa8.23□□□□□ -1.09
RFPL3-201ENST00000249007 LINC00479Q96M42 142 aa8.23□□□□□ -1.09
RFPL3-201ENST00000249007 CHAC1Q9BUX1 264 aa8.23□□□□□ -1.09
RFPL3-201ENST00000249007 RPP21Q9H633 154 aaKnown RBP8.23□□□□□ -1.09
RFPL3-201ENST00000249007 KLF12Q9Y4X4 402 aa8.23□□□□□ -1.09
RFPL3-201ENST00000249007 U3KQE9 123 aa8.23□□□□□ -1.09
RFPL3-201ENST00000249007 FAT3Q8TDW7 4589 aa8.23□□□□□ -1.09
RFPL3-201ENST00000249007 NPIPB6E9PJ23 425 aa8.22□□□□□ -1.09
RFPL3-201ENST00000249007 LINC00173Q6ZV60 143 aa8.22□□□□□ -1.09
RFPL3-201ENST00000249007 OR13C6PQ8NH95 151 aa8.22□□□□□ -1.09
RFPL3-201ENST00000249007 ZC2HC1AQ96GY0 325 aa8.22□□□□□ -1.09
RFPL3-201ENST00000249007 TRBV6-1A0A0K0K1D8 114 aa8.21□□□□□ -1.09
RFPL3-201ENST00000249007 SCGB2A1O75556 95 aa8.21□□□□□ -1.09
RFPL3-201ENST00000249007 FXYD2P54710 66 aa8.21□□□□□ -1.09
RFPL3-201ENST00000249007 TP73-AS1Q9UF72 201 aa8.21□□□□□ -1.09
RFPL3-201ENST00000249007 A0A087WTM6 91 aa8.2□□□□□ -1.1
RFPL3-201ENST00000249007 TRAV5A0A0B4J249 113 aa8.2□□□□□ -1.1
RFPL3-201ENST00000249007 A4D1N5 150 aa8.2□□□□□ -1.1
RFPL3-201ENST00000249007 ERHP84090 104 aaKnown RBP8.2□□□□□ -1.1
RFPL3-201ENST00000249007 PRCDQ00LT1 54 aa8.2□□□□□ -1.1
RFPL3-201ENST00000249007 RIGQ13278 110 aa8.2□□□□□ -1.1
RFPL3-201ENST00000249007 ESRGQ1W209 222 aa8.2□□□□□ -1.1
RFPL3-201ENST00000249007 SIGLEC15Q6ZMC9 328 aa8.2□□□□□ -1.1
RFPL3-201ENST00000249007 LINC01546A6NGU7 62 aa8.19□□□□□ -1.1
RFPL3-201ENST00000249007 J3KT08 172 aa8.19□□□□□ -1.1
RFPL3-201ENST00000249007 IGKV1-17P01599 117 aa8.19□□□□□ -1.1
RFPL3-201ENST00000249007 HBDP02042 147 aa8.19□□□□□ -1.1
RFPL3-201ENST00000249007 PRM2P04554 102 aa8.19□□□□□ -1.1
RFPL3-201ENST00000249007 IZUMO4Q1ZYL8 232 aa8.19□□□□□ -1.1
RFPL3-201ENST00000249007 MIC13Q5XKP0 118 aa8.19□□□□□ -1.1
RFPL3-201ENST00000249007 IMUPQ9GZP8 106 aa8.19□□□□□ -1.1
RFPL3-201ENST00000249007 MRPL36Q9P0J6 103 aaKnown RBP8.19□□□□□ -1.1
RFPL3-201ENST00000249007 C19orf71A6NCJ1 209 aa8.19□□□□□ -1.1
RFPL3-201ENST00000249007 A8MWV9 139 aa8.19□□□□□ -1.1
RFPL3-201ENST00000249007 ATP5LO75964 103 aa8.19□□□□□ -1.1
RFPL3-201ENST00000249007 CAMPP49913 170 aa8.19□□□□□ -1.1
RFPL3-201ENST00000249007 ZNF493Q6ZR52 646 aa8.19□□□□□ -1.1
RFPL3-201ENST00000249007 NAA38Q9BRA0 125 aaKnown RBP8.19□□□□□ -1.1
RFPL3-201ENST00000249007 MLST8Q9BVC4 326 aa8.19□□□□□ -1.1
RFPL3-201ENST00000249007 NHP2Q9NX24 153 aaKnown RBP8.19□□□□□ -1.1
RFPL3-201ENST00000249007 PEX7O00628 323 aa8.18□□□□□ -1.1
RFPL3-201ENST00000249007 PRSS3P2Q8NHM4 247 aa8.18□□□□□ -1.1
RFPL3-201ENST00000249007 DNAH8Q96JB1 4490 aa8.17□□□□□ -1.1
RFPL3-201ENST00000249007 TRBV25-1A0A075B6N4 114 aa8.17□□□□□ -1.1
RFPL3-201ENST00000249007 F8WDY8 70 aa8.17□□□□□ -1.1
RFPL3-201ENST00000249007 BUB3O43684 328 aa8.17□□□□□ -1.1
RFPL3-201ENST00000249007 OXTP01178 125 aa8.17□□□□□ -1.1
RFPL3-201ENST00000249007 IL4P05112 153 aa8.17□□□□□ -1.1
RFPL3-201ENST00000249007 HSPE1P61604 102 aaKnown RBP8.17□□□□□ -1.1
RFPL3-201ENST00000249007 SPINK9Q5DT21 86 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms