RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 LINC01619G3V211 115 aa6.68□□□□□ -1.34
SYDE2-201ENST00000234668 LGALS3P17931 250 aaKnown RBP6.68□□□□□ -1.34
SYDE2-201ENST00000234668 GAGE13Q4V321 117 aa6.68□□□□□ -1.34
SYDE2-201ENST00000234668 TMEM141Q96I45 108 aa6.68□□□□□ -1.34
SYDE2-201ENST00000234668 TIMM17AQ99595 171 aa6.68□□□□□ -1.34
SYDE2-201ENST00000234668 GTSF1LQ9H1H1 148 aa6.68□□□□□ -1.34
SYDE2-201ENST00000234668 IGLV4-3A0A075B6K6 122 aa6.67□□□□□ -1.34
SYDE2-201ENST00000234668 TRBV6-5A0A0K0K1A5 114 aa6.67□□□□□ -1.34
SYDE2-201ENST00000234668 J3QLI3 93 aa6.67□□□□□ -1.34
SYDE2-201ENST00000234668 TSPAN13O95857 204 aa6.67□□□□□ -1.34
SYDE2-201ENST00000234668 DEFB113Q30KQ7 82 aa6.67□□□□□ -1.34
SYDE2-201ENST00000234668 TNFRSF18Q9Y5U5 241 aa6.67□□□□□ -1.34
SYDE2-201ENST00000234668 TRGV11A0A075B6L2 103 aa6.66□□□□□ -1.34
SYDE2-201ENST00000234668 CFC1BP0CG36 223 aa6.66□□□□□ -1.34
SYDE2-201ENST00000234668 CFC1P0CG37 223 aa6.66□□□□□ -1.34
SYDE2-201ENST00000234668 ZNF22P17026 224 aaPredicted RBP6.66□□□□□ -1.34
SYDE2-201ENST00000234668 AMELXQ99217 191 aa6.66□□□□□ -1.34
SYDE2-201ENST00000234668 MAP6D1Q9H9H5 199 aa6.66□□□□□ -1.34
SYDE2-201ENST00000234668 SPANXB1Q9NS25 103 aaPredicted RBP6.66□□□□□ -1.34
SYDE2-201ENST00000234668 TSSC4Q9Y5U2 329 aaPredicted RBP6.66□□□□□ -1.34
SYDE2-201ENST00000234668 PRSS2P07478 247 aa6.66□□□□□ -1.34
SYDE2-201ENST00000234668 SAMD13Q5VXD3 122 aa6.66□□□□□ -1.34
SYDE2-201ENST00000234668 FSHBP01225 129 aa6.66□□□□□ -1.34
SYDE2-201ENST00000234668 IGHV3-30P01768 117 aa6.66□□□□□ -1.34
SYDE2-201ENST00000234668 SCGB1C2P0DMR2 95 aa6.66□□□□□ -1.34
SYDE2-201ENST00000234668 IGHV3-30-5P0DP03 117 aa6.66□□□□□ -1.34
SYDE2-201ENST00000234668 PLA2G2AP14555 144 aa6.66□□□□□ -1.34
SYDE2-201ENST00000234668 FAM104AQ969W3 186 aa6.66□□□□□ -1.34
SYDE2-201ENST00000234668 ODF3Q96PU9 254 aa6.66□□□□□ -1.34
SYDE2-201ENST00000234668 A4D1N5 150 aa6.65□□□□□ -1.34
SYDE2-201ENST00000234668 RPL32P62910 135 aaKnown RBP6.65□□□□□ -1.34
SYDE2-201ENST00000234668 COTL1Q14019 142 aa6.65□□□□□ -1.34
SYDE2-201ENST00000234668 DEFB114Q30KQ6 69 aa6.65□□□□□ -1.34
SYDE2-201ENST00000234668 NDUFA11Q86Y39 141 aa6.65□□□□□ -1.34
SYDE2-201ENST00000234668 WFDC10AQ9H1F0 79 aa6.65□□□□□ -1.34
SYDE2-201ENST00000234668 A0A0U1RRA0 63 aa6.65□□□□□ -1.35
SYDE2-201ENST00000234668 TMEM89A2RUT3 159 aa6.65□□□□□ -1.35
SYDE2-201ENST00000234668 RHODO00212 210 aa6.65□□□□□ -1.35
SYDE2-201ENST00000234668 EIF4EBP3O60516 100 aaPredicted RBP6.65□□□□□ -1.35
SYDE2-201ENST00000234668 NDUFA7O95182 113 aa6.65□□□□□ -1.35
SYDE2-201ENST00000234668 UBE2D1P51668 147 aa6.65□□□□□ -1.35
SYDE2-201ENST00000234668 Q6ZSV7 163 aa6.65□□□□□ -1.35
SYDE2-201ENST00000234668 MUSTN1Q8IVN3 82 aa6.65□□□□□ -1.35
SYDE2-201ENST00000234668 SLC25A29Q8N8R3 303 aa6.65□□□□□ -1.35
SYDE2-201ENST00000234668 VWFP04275 2813 aa6.65□□□□□ -1.35
SYDE2-201ENST00000234668 TMEM223A0PJW6 202 aa6.64□□□□□ -1.35
SYDE2-201ENST00000234668 SPINK8P0C7L1 97 aa6.64□□□□□ -1.35
SYDE2-201ENST00000234668 SMCPP49901 116 aaPredicted RBP6.64□□□□□ -1.35
SYDE2-201ENST00000234668 SMAGPQ0VAQ4 97 aa6.64□□□□□ -1.35
SYDE2-201ENST00000234668 NSUN5P1Q3KNT7 163 aa6.64□□□□□ -1.35
SYDE2-201ENST00000234668 CFAP126Q5VTH2 177 aa6.64□□□□□ -1.35
SYDE2-201ENST00000234668 C10orf126Q8N4M7 172 aa6.64□□□□□ -1.35
SYDE2-201ENST00000234668 PRO0461Q9UI25 63 aa6.64□□□□□ -1.35
SYDE2-201ENST00000234668 F8W1H4 67 aa6.64□□□□□ -1.35
SYDE2-201ENST00000234668 M0R2P5 195 aa6.64□□□□□ -1.35
SYDE2-201ENST00000234668 PAPPA-AS1Q5QFB9 102 aa6.64□□□□□ -1.35
SYDE2-201ENST00000234668 DAND5Q8N907 189 aa6.64□□□□□ -1.35
SYDE2-201ENST00000234668 LINC00467Q9BRT7 94 aa6.64□□□□□ -1.35
SYDE2-201ENST00000234668 TMEM238LA0A1B0GVL6 79 aa6.63□□□□□ -1.35
SYDE2-201ENST00000234668 A6NJY4 79 aa6.63□□□□□ -1.35
SYDE2-201ENST00000234668 RHOHQ15669 191 aa6.63□□□□□ -1.35
SYDE2-201ENST00000234668 ESM1Q9NQ30 184 aa6.63□□□□□ -1.35
SYDE2-201ENST00000234668 TRGV1A0A0A0MS02 117 aa6.63□□□□□ -1.35
SYDE2-201ENST00000234668 TCL1BO95988 128 aa6.63□□□□□ -1.35
SYDE2-201ENST00000234668 IGHV3-30-3P0DP02 117 aa6.63□□□□□ -1.35
SYDE2-201ENST00000234668 Q6ZUT4 128 aa6.63□□□□□ -1.35
SYDE2-201ENST00000234668 ZNF625Q96I27 306 aaPredicted RBP6.63□□□□□ -1.35
SYDE2-201ENST00000234668 PEMTQ9UBM1 199 aa6.63□□□□□ -1.35
SYDE2-201ENST00000234668 ODF3L2Q3SX64 289 aa6.63□□□□□ -1.35
SYDE2-201ENST00000234668 KRTAP1-3Q8IUG1 177 aa6.63□□□□□ -1.35
SYDE2-201ENST00000234668 ADAMTSL4-AS1Q5T5F5 129 aa6.62□□□□□ -1.35
SYDE2-201ENST00000234668 NFE4Q86UQ8 179 aa6.62□□□□□ -1.35
SYDE2-201ENST00000234668 RNF152Q8N8N0 203 aa6.62□□□□□ -1.35
SYDE2-201ENST00000234668 CITED2Q99967 270 aaPredicted RBP6.62□□□□□ -1.35
SYDE2-201ENST00000234668 CHCHD7Q9BUK0 85 aa6.62□□□□□ -1.35
SYDE2-201ENST00000234668 UNC79Q9P2D8 2635 aa6.62□□□□□ -1.35
SYDE2-201ENST00000234668 DNAJC9-AS1A6NH13 148 aa6.61□□□□□ -1.35
SYDE2-201ENST00000234668 LEPROTO15243 131 aa6.61□□□□□ -1.35
SYDE2-201ENST00000234668 ZNF415Q09FC8 603 aa6.61□□□□□ -1.35
SYDE2-201ENST00000234668 Q1RN00 199 aa6.61□□□□□ -1.35
SYDE2-201ENST00000234668 C11orf72Q8NBR9 251 aa6.61□□□□□ -1.35
SYDE2-201ENST00000234668 C4orf3Q8WVX3 66 aa6.61□□□□□ -1.35
SYDE2-201ENST00000234668 TIMM21Q9BVV7 248 aa6.61□□□□□ -1.35
SYDE2-201ENST00000234668 PDZD2O15018 2839 aa6.61□□□□□ -1.35
SYDE2-201ENST00000234668 RPL35AP18077 110 aaKnown RBP6.61□□□□□ -1.35
SYDE2-201ENST00000234668 Q6ZTI0 123 aa6.61□□□□□ -1.35
SYDE2-201ENST00000234668 STHQ8IWL8 128 aa6.61□□□□□ -1.35
SYDE2-201ENST00000234668 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.61□□□□□ -1.35
SYDE2-201ENST00000234668 PRO1854Q9UHT4 67 aa6.61□□□□□ -1.35
SYDE2-201ENST00000234668 A0A0J9YXY3 114 aa6.6□□□□□ -1.35
SYDE2-201ENST00000234668 GAGE12HA6NDE8 117 aa6.6□□□□□ -1.35
SYDE2-201ENST00000234668 A8MWV9 139 aa6.6□□□□□ -1.35
SYDE2-201ENST00000234668 LINC00694P0DN24 101 aa6.6□□□□□ -1.35
SYDE2-201ENST00000234668 C1orf158Q8N1D5 194 aa6.6□□□□□ -1.35
SYDE2-201ENST00000234668 CCL24O00175 119 aa6.6□□□□□ -1.35
SYDE2-201ENST00000234668 DGAT2L7PQ6IED9 249 aa6.6□□□□□ -1.35
SYDE2-201ENST00000234668 ANK3Q12955 4377 aaKnown RBP6.6□□□□□ -1.35
SYDE2-201ENST00000234668 INSP01308 110 aa6.6□□□□□ -1.35
SYDE2-201ENST00000234668 COX6A2Q02221 97 aa6.6□□□□□ -1.35
SYDE2-201ENST00000234668 CDKN2A-AS1Q9UH64 79 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms