RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 C1QTNF4Q9BXJ3 329 aa11.47□□□□□ -0.57
ITGA4-201ENST00000233573 TNFRSF18Q9Y5U5 241 aa11.47□□□□□ -0.57
ITGA4-201ENST00000233573 DAZ2Q13117 558 aaKnown RBP11.46□□□□□ -0.57
ITGA4-201ENST00000233573 C9orf66Q5T8R8 295 aa11.46□□□□□ -0.57
ITGA4-201ENST00000233573 TRGV1A0A0A0MS02 117 aa11.45□□□□□ -0.58
ITGA4-201ENST00000233573 Q6ZTI0 123 aa11.45□□□□□ -0.58
ITGA4-201ENST00000233573 DNAJC30Q96LL9 226 aa11.45□□□□□ -0.58
ITGA4-201ENST00000233573 INSL3P51460 131 aa11.45□□□□□ -0.58
ITGA4-201ENST00000233573 TMEM97Q5BJF2 176 aa11.44□□□□□ -0.58
ITGA4-201ENST00000233573 FAM104AQ969W3 186 aa11.44□□□□□ -0.58
ITGA4-201ENST00000233573 C16orf74Q96GX8 76 aa11.44□□□□□ -0.58
ITGA4-201ENST00000233573 HIGD1BQ9P298 99 aa11.44□□□□□ -0.58
ITGA4-201ENST00000233573 C11orf86A6NJI1 115 aa11.44□□□□□ -0.58
ITGA4-201ENST00000233573 MAPKAPK5-AS1Q8N8E1 139 aa11.44□□□□□ -0.58
ITGA4-201ENST00000233573 OR4C5Q8NGB2 326 aa11.44□□□□□ -0.58
ITGA4-201ENST00000233573 ZNF479Q96JC4 524 aa11.44□□□□□ -0.58
ITGA4-201ENST00000233573 OPRPNQ99935 248 aaPredicted RBP11.44□□□□□ -0.58
ITGA4-201ENST00000233573 C3orf56Q8N813 242 aa11.43□□□□□ -0.58
ITGA4-201ENST00000233573 COL6A5A8TX70 2615 aa11.43□□□□□ -0.58
ITGA4-201ENST00000233573 TRAV4A0A0B4J268 109 aa11.42□□□□□ -0.58
ITGA4-201ENST00000233573 HSD52Q0P140 79 aa11.42□□□□□ -0.58
ITGA4-201ENST00000233573 CHCHD7Q9BUK0 85 aa11.42□□□□□ -0.58
ITGA4-201ENST00000233573 NOP10Q9NPE3 64 aaKnown RBP11.42□□□□□ -0.58
ITGA4-201ENST00000233573 PYGO1Q9Y3Y4 419 aa11.42□□□□□ -0.58
ITGA4-201ENST00000233573 TRBV25-1A0A075B6N4 114 aa11.42□□□□□ -0.58
ITGA4-201ENST00000233573 PAPPA-AS1Q5QFB9 102 aa11.42□□□□□ -0.58
ITGA4-201ENST00000233573 Q6ZVH6 145 aa11.42□□□□□ -0.58
ITGA4-201ENST00000233573 OVOL2Q9BRP0 275 aa11.42□□□□□ -0.58
ITGA4-201ENST00000233573 PKD1L1Q8TDX9 2849 aa11.41□□□□□ -0.58
ITGA4-201ENST00000233573 IGLV4-3A0A075B6K6 122 aa11.41□□□□□ -0.58
ITGA4-201ENST00000233573 E9PLD3 99 aa11.41□□□□□ -0.58
ITGA4-201ENST00000233573 WFDC9Q8NEX5 89 aa11.41□□□□□ -0.58
ITGA4-201ENST00000233573 TRAV8-6A0A0B4J262 113 aa11.4□□□□□ -0.58
ITGA4-201ENST00000233573 ZNRF2Q8NHG8 242 aa11.4□□□□□ -0.58
ITGA4-201ENST00000233573 TAX1BP3O14907 124 aa11.4□□□□□ -0.58
ITGA4-201ENST00000233573 EMP1P54849 157 aa11.4□□□□□ -0.58
ITGA4-201ENST00000233573 RRN3P1Q2M238 152 aa11.4□□□□□ -0.58
ITGA4-201ENST00000233573 COX11Q9Y6N1 276 aa11.4□□□□□ -0.58
ITGA4-201ENST00000233573 SEC11AP67812 179 aa11.39□□□□□ -0.59
ITGA4-201ENST00000233573 NFE4Q86UQ8 179 aa11.39□□□□□ -0.59
ITGA4-201ENST00000233573 PCP4P48539 62 aa11.39□□□□□ -0.59
ITGA4-201ENST00000233573 PTTG1IPP53801 180 aa11.39□□□□□ -0.59
ITGA4-201ENST00000233573 OR11H2Q8NH07 326 aa11.39□□□□□ -0.59
ITGA4-201ENST00000233573 AMELXQ99217 191 aa11.39□□□□□ -0.59
ITGA4-201ENST00000233573 PRADC1Q9BSG0 188 aa11.39□□□□□ -0.59
ITGA4-201ENST00000233573 CHAC1Q9BUX1 264 aa11.39□□□□□ -0.59
ITGA4-201ENST00000233573 TRBV10-1A0A0K0K1A3 114 aa11.38□□□□□ -0.59
ITGA4-201ENST00000233573 K7EQD1 137 aa11.38□□□□□ -0.59
ITGA4-201ENST00000233573 TRBV7-3A0A075B6L6 115 aa11.37□□□□□ -0.59
ITGA4-201ENST00000233573 IGHV3-38A0A0C4DH36 116 aa11.37□□□□□ -0.59
ITGA4-201ENST00000233573 CRYBA4P53673 196 aa11.37□□□□□ -0.59
ITGA4-201ENST00000233573 UBE2V1Q13404 147 aa11.37□□□□□ -0.59
ITGA4-201ENST00000233573 PHLDA1Q8WV24 401 aaPredicted RBP11.37□□□□□ -0.59
ITGA4-201ENST00000233573 ANK2Q01484 3957 aa11.37□□□□□ -0.59
ITGA4-201ENST00000233573 SLC25A29Q8N8R3 303 aa11.37□□□□□ -0.59
ITGA4-201ENST00000233573 UBE2D4Q9Y2X8 147 aa11.37□□□□□ -0.59
ITGA4-201ENST00000233573 MYMXA0A1B0GTQ4 84 aa11.36□□□□□ -0.59
ITGA4-201ENST00000233573 K7EP13 123 aa11.36□□□□□ -0.59
ITGA4-201ENST00000233573 COTL1Q14019 142 aa11.36□□□□□ -0.59
ITGA4-201ENST00000233573 CEMP1Q6PRD7 247 aaPredicted RBP11.36□□□□□ -0.59
ITGA4-201ENST00000233573 CCL25O15444 150 aa11.36□□□□□ -0.59
ITGA4-201ENST00000233573 OXLD1Q5BKU9 147 aa11.36□□□□□ -0.59
ITGA4-201ENST00000233573 SHISA2Q6UWI4 295 aa11.36□□□□□ -0.59
ITGA4-201ENST00000233573 VCX2Q9H322 139 aa11.36□□□□□ -0.59
ITGA4-201ENST00000233573 SPANXA1Q9NS26 97 aa11.36□□□□□ -0.59
ITGA4-201ENST00000233573 GAGE12BA1L429 117 aa11.35□□□□□ -0.59
ITGA4-201ENST00000233573 GAGE7O76087 117 aa11.35□□□□□ -0.59
ITGA4-201ENST00000233573 GAGE12FP0CL80 117 aa11.35□□□□□ -0.59
ITGA4-201ENST00000233573 GAGE12GP0CL81 117 aa11.35□□□□□ -0.59
ITGA4-201ENST00000233573 GAGE12IP0CL82 117 aa11.35□□□□□ -0.59
ITGA4-201ENST00000233573 NBEAL2Q6ZNJ1 2754 aa11.34□□□□□ -0.59
ITGA4-201ENST00000233573 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.34□□□□□ -0.59
ITGA4-201ENST00000233573 IGKV2-29A2NJV5 120 aaPredicted RBP11.34□□□□□ -0.59
ITGA4-201ENST00000233573 CIDEAO60543 219 aa11.34□□□□□ -0.59
ITGA4-201ENST00000233573 UBE2D3P61077 147 aa11.34□□□□□ -0.59
ITGA4-201ENST00000233573 UBE2D2P62837 147 aa11.34□□□□□ -0.59
ITGA4-201ENST00000233573 RPL36AP83881 106 aaKnown RBP11.34□□□□□ -0.59
ITGA4-201ENST00000233573 RPL36ALQ969Q0 106 aaKnown RBP11.34□□□□□ -0.59
ITGA4-201ENST00000233573 X6R8D5 127 aa11.34□□□□□ -0.59
ITGA4-201ENST00000233573 TRGV2A0A075B6R0 118 aa11.33□□□□□ -0.6
ITGA4-201ENST00000233573 A0A0J9YXV3 536 aa11.33□□□□□ -0.6
ITGA4-201ENST00000233573 WIPF1O43516 503 aa11.33□□□□□ -0.6
ITGA4-201ENST00000233573 HERVK_113P61574 105 aa11.33□□□□□ -0.6
ITGA4-201ENST00000233573 TMEM170BQ5T4T1 132 aa11.33□□□□□ -0.6
ITGA4-201ENST00000233573 LINC00612Q8N6U2 182 aa11.33□□□□□ -0.6
ITGA4-201ENST00000233573 TM2D2Q9BX73 214 aa11.33□□□□□ -0.6
ITGA4-201ENST00000233573 ZNF22P17026 224 aaPredicted RBP11.32□□□□□ -0.6
ITGA4-201ENST00000233573 DAZ4Q86SG3 579 aaKnown RBP11.32□□□□□ -0.6
ITGA4-201ENST00000233573 DAZ3Q9NR90 486 aaKnown RBP11.32□□□□□ -0.6
ITGA4-201ENST00000233573 TRBV6-4A0A1B0GX49 114 aa11.32□□□□□ -0.6
ITGA4-201ENST00000233573 TMEM223A0PJW6 202 aa11.32□□□□□ -0.6
ITGA4-201ENST00000233573 A6NDN8 102 aa11.32□□□□□ -0.6
ITGA4-201ENST00000233573 FXYD2P54710 66 aa11.32□□□□□ -0.6
ITGA4-201ENST00000233573 TSPEAR-AS2P59090 65 aa11.32□□□□□ -0.6
ITGA4-201ENST00000233573 MRPS36P82909 103 aaKnown RBP11.32□□□□□ -0.6
ITGA4-201ENST00000233573 TAL2Q16559 108 aa11.32□□□□□ -0.6
ITGA4-201ENST00000233573 NTM-AS1Q6ZSK4 140 aa11.32□□□□□ -0.6
ITGA4-201ENST00000233573 RBX1P62877 108 aa11.31□□□□□ -0.6
ITGA4-201ENST00000233573 C21orf62-AS1Q17RA5 79 aa11.31□□□□□ -0.6
ITGA4-201ENST00000233573 TIMM21Q9BVV7 248 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms